RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 CCDC146Q8IYE0 955 aa19.75■□□□□ 0.75
CDK5RAP3-218ENST00000580391 CFAP53Q96M91 514 aa19.75■□□□□ 0.75
CDK5RAP3-218ENST00000580391 ZNF692Q9BU19 519 aaPredicted RBP19.74■□□□□ 0.75
CDK5RAP3-218ENST00000580391 ZRANB1Q9UGI0 708 aa19.74■□□□□ 0.75
CDK5RAP3-218ENST00000580391 NUDCQ9Y266 331 aa19.74■□□□□ 0.75
CDK5RAP3-218ENST00000580391 PMFBP1Q8TBY8 1022 aa19.73■□□□□ 0.75
CDK5RAP3-218ENST00000580391 SUPT16HQ9Y5B9 1047 aaKnown RBP19.73■□□□□ 0.75
CDK5RAP3-218ENST00000580391 LMTK3Q96Q04 1460 aa19.73■□□□□ 0.75
CDK5RAP3-218ENST00000580391 HSPA2P54652 639 aa19.72■□□□□ 0.75
CDK5RAP3-218ENST00000580391 SSH2Q76I76 1423 aa19.71■□□□□ 0.75
CDK5RAP3-218ENST00000580391 TTC21BQ7Z4L5 1316 aa19.71■□□□□ 0.75
CDK5RAP3-218ENST00000580391 PIK3C2AO00443 1686 aa19.71■□□□□ 0.75
CDK5RAP3-218ENST00000580391 FBLN1P23142 703 aa19.7■□□□□ 0.74
CDK5RAP3-218ENST00000580391 OVOS2A0A0J9YW53 1432 aa19.7■□□□□ 0.74
CDK5RAP3-218ENST00000580391 OVOS2Q6IE36 1432 aa19.7■□□□□ 0.74
CDK5RAP3-218ENST00000580391 STRCQ7RTU9 1775 aa19.7■□□□□ 0.74
CDK5RAP3-218ENST00000580391 IQSEC2Q5JU85 1478 aa19.69■□□□□ 0.74
CDK5RAP3-218ENST00000580391 FKBP8Q14318 412 aa19.68■□□□□ 0.74
CDK5RAP3-218ENST00000580391 COG3Q96JB2 828 aa19.68■□□□□ 0.74
CDK5RAP3-218ENST00000580391 NEFLP07196 543 aa19.68■□□□□ 0.74
CDK5RAP3-218ENST00000580391 MARF1Q9Y4F3 1742 aaKnown RBP19.67■□□□□ 0.74
CDK5RAP3-218ENST00000580391 PNPLA6Q8IY17 1366 aa19.67■□□□□ 0.74
CDK5RAP3-218ENST00000580391 APAF1O14727 1248 aa19.66■□□□□ 0.74
CDK5RAP3-218ENST00000580391 PDE3BQ13370 1112 aa19.66■□□□□ 0.74
CDK5RAP3-218ENST00000580391 NGDNQ8NEJ9 315 aaKnown RBP19.66■□□□□ 0.74
CDK5RAP3-218ENST00000580391 CDCA7LQ96GN5 454 aa19.66■□□□□ 0.74
CDK5RAP3-218ENST00000580391 POLKQ9UBT6 870 aa19.66■□□□□ 0.74
CDK5RAP3-218ENST00000580391 CDK12Q9NYV4 1490 aaPredicted RBP19.66■□□□□ 0.74
CDK5RAP3-218ENST00000580391 AATKQ6ZMQ8 1374 aa19.66■□□□□ 0.74
CDK5RAP3-218ENST00000580391 ZNF521Q96K83 1311 aa19.65■□□□□ 0.74
CDK5RAP3-218ENST00000580391 EMILIN1Q9Y6C2 1016 aa19.64■□□□□ 0.74
CDK5RAP3-218ENST00000580391 USP54Q70EL1 1684 aa19.64■□□□□ 0.73
CDK5RAP3-218ENST00000580391 C14orf37Q86TY3 774 aa19.64■□□□□ 0.73
CDK5RAP3-218ENST00000580391 U2AF1L5P0DN76 240 aaPredicted RBP19.63■□□□□ 0.73
CDK5RAP3-218ENST00000580391 U2AF1Q01081 240 aaKnown RBP eCLIP19.63■□□□□ 0.736e-9■■■□□ 17
CDK5RAP3-218ENST00000580391 TTC21AQ8NDW8 1320 aa19.63■□□□□ 0.73
CDK5RAP3-218ENST00000580391 PEAK1Q9H792 1746 aa19.63■□□□□ 0.73
CDK5RAP3-218ENST00000580391 PPM1GO15355 546 aaPredicted RBP19.63■□□□□ 0.73
CDK5RAP3-218ENST00000580391 PROSER2Q86WR7 435 aaPredicted RBP19.62■□□□□ 0.73
CDK5RAP3-218ENST00000580391 U2SURPO15042 1029 aaKnown RBP19.61■□□□□ 0.73
CDK5RAP3-218ENST00000580391 IRX6P78412 446 aaPredicted RBP19.61■□□□□ 0.73
CDK5RAP3-218ENST00000580391 RRS1Q15050 365 aaKnown RBP19.61■□□□□ 0.73
CDK5RAP3-218ENST00000580391 RUNDC1Q96C34 613 aa19.61■□□□□ 0.73
CDK5RAP3-218ENST00000580391 LRRC7Q96NW7 1537 aa19.61■□□□□ 0.73
CDK5RAP3-218ENST00000580391 DIAPH1O60610 1272 aaKnown RBP19.61■□□□□ 0.73
CDK5RAP3-218ENST00000580391 XIRP1Q702N8 1843 aaKnown RBP19.61■□□□□ 0.73
CDK5RAP3-218ENST00000580391 PHF8Q9UPP1 1060 aa19.6■□□□□ 0.73
CDK5RAP3-218ENST00000580391 USP31Q70CQ4 1352 aa19.6■□□□□ 0.73
CDK5RAP3-218ENST00000580391 TMEM94Q12767 1356 aa19.57■□□□□ 0.72
CDK5RAP3-218ENST00000580391 KIF1AQ12756 1690 aa19.57■□□□□ 0.72
CDK5RAP3-218ENST00000580391 TCP11L2Q8N4U5 519 aa19.57■□□□□ 0.72
CDK5RAP3-218ENST00000580391 RRP7AQ9Y3A4 280 aaKnown RBP19.57■□□□□ 0.72
CDK5RAP3-218ENST00000580391 ESCO1Q5FWF5 840 aa19.56■□□□□ 0.72
CDK5RAP3-218ENST00000580391 GOLGA2Q08379 1002 aa19.55■□□□□ 0.72
CDK5RAP3-218ENST00000580391 RNF123Q5XPI4 1314 aa19.54■□□□□ 0.72
CDK5RAP3-218ENST00000580391 SOX12O15370 315 aa19.54■□□□□ 0.72
CDK5RAP3-218ENST00000580391 NGEFQ8N5V2 710 aa19.54■□□□□ 0.72
CDK5RAP3-218ENST00000580391 DMRT2Q9Y5R5 561 aa19.54■□□□□ 0.72
CDK5RAP3-218ENST00000580391 C1orf167Q5SNV9 1468 aa19.54■□□□□ 0.72
CDK5RAP3-218ENST00000580391 NEUROD2Q15784 382 aa19.53■□□□□ 0.72
CDK5RAP3-218ENST00000580391 PLEKHF1Q96S99 279 aa19.53■□□□□ 0.72
CDK5RAP3-218ENST00000580391 TRPM3Q9HCF6 1732 aaPredicted RBP19.53■□□□□ 0.72
CDK5RAP3-218ENST00000580391 DUSP27Q5VZP5 1158 aa19.53■□□□□ 0.72
CDK5RAP3-218ENST00000580391 ORAI2Q96SN7 254 aa19.53■□□□□ 0.72
CDK5RAP3-218ENST00000580391 LTN1O94822 1766 aa19.52■□□□□ 0.72
CDK5RAP3-218ENST00000580391 IL13P35225 146 aa19.52■□□□□ 0.72
CDK5RAP3-218ENST00000580391 SPINK5Q9NQ38 1064 aaPredicted RBP19.52■□□□□ 0.72
CDK5RAP3-218ENST00000580391 RGPD1P0DJD0 1748 aa19.52■□□□□ 0.72
CDK5RAP3-218ENST00000580391 PAK3O75914 559 aaPredicted RBP19.52■□□□□ 0.71
CDK5RAP3-218ENST00000580391 SLFN5Q08AF3 891 aa19.52■□□□□ 0.71
CDK5RAP3-218ENST00000580391 WWC1Q8IX03 1113 aa19.52■□□□□ 0.71
CDK5RAP3-218ENST00000580391 C19orf44Q9H6X5 657 aa19.52■□□□□ 0.71
CDK5RAP3-218ENST00000580391 DCCP43146 1447 aa19.51■□□□□ 0.71
CDK5RAP3-218ENST00000580391 MST1RQ04912 1400 aa19.51■□□□□ 0.71
CDK5RAP3-218ENST00000580391 NUTM2GQ5VZR2 741 aa19.51■□□□□ 0.71
CDK5RAP3-218ENST00000580391 RCAN3Q9UKA8 241 aa19.51■□□□□ 0.71
CDK5RAP3-218ENST00000580391 NLRP6P59044 892 aa19.5■□□□□ 0.71
CDK5RAP3-218ENST00000580391 PHF23Q9BUL5 403 aaPredicted RBP19.5■□□□□ 0.71
CDK5RAP3-218ENST00000580391 NCOA3Q9Y6Q9 1424 aa19.5■□□□□ 0.71
CDK5RAP3-218ENST00000580391 MAPK8IP3Q9UPT6 1336 aa19.49■□□□□ 0.71
CDK5RAP3-218ENST00000580391 ABTB2Q8N961 1025 aa19.49■□□□□ 0.71
CDK5RAP3-218ENST00000580391 RSPH6AQ9H0K4 717 aa19.49■□□□□ 0.71
CDK5RAP3-218ENST00000580391 DLG5Q8TDM6 1919 aa19.49■□□□□ 0.71
CDK5RAP3-218ENST00000580391 MAP3K19Q56UN5 1328 aa19.49■□□□□ 0.71
CDK5RAP3-218ENST00000580391 HMOX1P09601 288 aa19.48■□□□□ 0.71
CDK5RAP3-218ENST00000580391 TRMT2AQ8IZ69 625 aaKnown RBP19.48■□□□□ 0.71
CDK5RAP3-218ENST00000580391 PRKAR2BP31323 418 aa19.47■□□□□ 0.71
CDK5RAP3-218ENST00000580391 E9PSI1 815 aa19.46■□□□□ 0.71
CDK5RAP3-218ENST00000580391 FCHSD2O94868 740 aa19.46■□□□□ 0.71
CDK5RAP3-218ENST00000580391 PSME1Q06323 249 aa19.46■□□□□ 0.71
CDK5RAP3-218ENST00000580391 EIF4A2Q14240 407 aaKnown RBP19.46■□□□□ 0.71
CDK5RAP3-218ENST00000580391 CCDC27Q2M243 656 aa19.46■□□□□ 0.71
CDK5RAP3-218ENST00000580391 SBNO1A3KN83 1393 aa19.46■□□□□ 0.71
CDK5RAP3-218ENST00000580391 NFAT5O94916 1531 aa19.46■□□□□ 0.71
CDK5RAP3-218ENST00000580391 FOXO3O43524 673 aa19.46■□□□□ 0.71
CDK5RAP3-218ENST00000580391 TMPOP42166 694 aaKnown RBP19.46■□□□□ 0.71
CDK5RAP3-218ENST00000580391 XPCQ01831 940 aaPredicted RBP19.46■□□□□ 0.71
CDK5RAP3-218ENST00000580391 FLT4P35916 1363 aa19.46■□□□□ 0.7
CDK5RAP3-218ENST00000580391 ATF3P18847 181 aa19.45■□□□□ 0.7
CDK5RAP3-218ENST00000580391 RRP1P56182 461 aaKnown RBP19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms