RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 ESCO1Q5FWF5 840 aa16.93■□□□□ 0.3
CDK5RAP3-217ENST00000580287 ORAI2Q96SN7 254 aa16.93■□□□□ 0.3
CDK5RAP3-217ENST00000580287 TMEM94Q12767 1356 aa16.92■□□□□ 0.3
CDK5RAP3-217ENST00000580287 SOX12O15370 315 aa16.92■□□□□ 0.3
CDK5RAP3-217ENST00000580287 ZNF692Q9BU19 519 aaPredicted RBP16.92■□□□□ 0.3
CDK5RAP3-217ENST00000580287 USP32Q8NFA0 1604 aa16.92■□□□□ 0.3
CDK5RAP3-217ENST00000580287 PPM1GO15355 546 aaPredicted RBP16.91■□□□□ 0.3
CDK5RAP3-217ENST00000580287 NUTM2GQ5VZR2 741 aa16.91■□□□□ 0.3
CDK5RAP3-217ENST00000580287 ADGRL3Q9HAR2 1447 aa16.91■□□□□ 0.3
CDK5RAP3-217ENST00000580287 TTC21BQ7Z4L5 1316 aa16.91■□□□□ 0.3
CDK5RAP3-217ENST00000580287 XPCQ01831 940 aaPredicted RBP16.9■□□□□ 0.3
CDK5RAP3-217ENST00000580287 NALCNQ8IZF0 1738 aa16.9■□□□□ 0.3
CDK5RAP3-217ENST00000580287 STRCQ7RTU9 1775 aa16.9■□□□□ 0.3
CDK5RAP3-217ENST00000580287 RGPD8O14715 1765 aaPredicted RBP16.89■□□□□ 0.29
CDK5RAP3-217ENST00000580287 EDC4Q6P2E9 1401 aaKnown RBP16.89■□□□□ 0.29
CDK5RAP3-217ENST00000580287 CDC42BPGQ6DT37 1551 aa16.89■□□□□ 0.29
CDK5RAP3-217ENST00000580287 PLEKHG5O94827 1062 aa16.89■□□□□ 0.29
CDK5RAP3-217ENST00000580287 C19orf44Q9H6X5 657 aa16.89■□□□□ 0.29
CDK5RAP3-217ENST00000580287 PHF8Q9UPP1 1060 aa16.89■□□□□ 0.29
CDK5RAP3-217ENST00000580287 PAK3O75914 559 aaPredicted RBP16.88■□□□□ 0.29
CDK5RAP3-217ENST00000580287 FOXO3O43524 673 aa16.88■□□□□ 0.29
CDK5RAP3-217ENST00000580287 WDR43Q15061 677 aaKnown RBP eCLIP16.88■□□□□ 0.29
CDK5RAP3-217ENST00000580287 CCDC146Q8IYE0 955 aa16.88■□□□□ 0.29
CDK5RAP3-217ENST00000580287 BCL11AQ9H165 835 aa16.88■□□□□ 0.29
CDK5RAP3-217ENST00000580287 NSD2O96028 1365 aa16.88■□□□□ 0.29
CDK5RAP3-217ENST00000580287 RRS1Q15050 365 aaKnown RBP16.87■□□□□ 0.29
CDK5RAP3-217ENST00000580287 STRCP1A6NGW2 1772 aa16.87■□□□□ 0.29
CDK5RAP3-217ENST00000580287 USP6P35125 1406 aa16.87■□□□□ 0.29
CDK5RAP3-217ENST00000580287 RBM19Q9Y4C8 960 aaKnown RBP16.87■□□□□ 0.29
CDK5RAP3-217ENST00000580287 DDX17Q92841 729 aaKnown RBP16.86■□□□□ 0.29
CDK5RAP3-217ENST00000580287 COG3Q96JB2 828 aa16.86■□□□□ 0.29
CDK5RAP3-217ENST00000580287 EIF5BO60841 1220 aaKnown RBP16.86■□□□□ 0.29
CDK5RAP3-217ENST00000580287 EMILIN1Q9Y6C2 1016 aa16.86■□□□□ 0.29
CDK5RAP3-217ENST00000580287 NWD1Q149M9 1564 aa16.85■□□□□ 0.29
CDK5RAP3-217ENST00000580287 POLKQ9UBT6 870 aa16.85■□□□□ 0.29
CDK5RAP3-217ENST00000580287 POLR3AO14802 1390 aaPredicted RBP16.84■□□□□ 0.29
CDK5RAP3-217ENST00000580287 ATF3P18847 181 aa16.84■□□□□ 0.29
CDK5RAP3-217ENST00000580287 TAOK2Q9UL54 1235 aa16.84■□□□□ 0.29
CDK5RAP3-217ENST00000580287 ANKARQ7Z5J8 1434 aa16.84■□□□□ 0.29
CDK5RAP3-217ENST00000580287 TOPAZ1Q8N9V7 1692 aa16.83■□□□□ 0.29
CDK5RAP3-217ENST00000580287 PSME1Q06323 249 aa16.83■□□□□ 0.28
CDK5RAP3-217ENST00000580287 B4GALNT3Q6L9W6 998 aa16.82■□□□□ 0.28
CDK5RAP3-217ENST00000580287 FMN2Q9NZ56 1722 aa16.82■□□□□ 0.28
CDK5RAP3-217ENST00000580287 SSH2Q76I76 1423 aa16.82■□□□□ 0.28
CDK5RAP3-217ENST00000580287 NLRP6P59044 892 aa16.82■□□□□ 0.28
CDK5RAP3-217ENST00000580287 ABTB2Q8N961 1025 aa16.81■□□□□ 0.28
CDK5RAP3-217ENST00000580287 U2SURPO15042 1029 aaKnown RBP16.8■□□□□ 0.28
CDK5RAP3-217ENST00000580287 CFAP53Q96M91 514 aa16.8■□□□□ 0.28
CDK5RAP3-217ENST00000580287 LMOD2Q6P5Q4 547 aa16.8■□□□□ 0.28
CDK5RAP3-217ENST00000580287 MON2Q7Z3U7 1717 aa16.79■□□□□ 0.28
CDK5RAP3-217ENST00000580287 AKAP12Q02952 1782 aa16.79■□□□□ 0.28
CDK5RAP3-217ENST00000580287 ITSN1Q15811 1721 aa16.79■□□□□ 0.28
CDK5RAP3-217ENST00000580287 U2AF1L5P0DN76 240 aaPredicted RBP16.79■□□□□ 0.28
CDK5RAP3-217ENST00000580287 U2AF1Q01081 240 aaKnown RBP eCLIP16.79■□□□□ 0.286e-9■■■□□ 17
CDK5RAP3-217ENST00000580287 C1orf167Q5SNV9 1468 aa16.78■□□□□ 0.28
CDK5RAP3-217ENST00000580287 APAF1O14727 1248 aa16.78■□□□□ 0.28
CDK5RAP3-217ENST00000580287 CADPS2Q86UW7 1296 aa16.77■□□□□ 0.27
CDK5RAP3-217ENST00000580287 MSH6P52701 1360 aa16.76■□□□□ 0.27
CDK5RAP3-217ENST00000580287 LRRC7Q96NW7 1537 aa16.76■□□□□ 0.27
CDK5RAP3-217ENST00000580287 KIF20BQ96Q89 1820 aa16.76■□□□□ 0.27
CDK5RAP3-217ENST00000580287 TTC21AQ8NDW8 1320 aa16.76■□□□□ 0.27
CDK5RAP3-217ENST00000580287 NEUROD2Q15784 382 aa16.76■□□□□ 0.27
CDK5RAP3-217ENST00000580287 CDCA7LQ96GN5 454 aa16.75■□□□□ 0.27
CDK5RAP3-217ENST00000580287 NUDCQ9Y266 331 aa16.75■□□□□ 0.27
CDK5RAP3-217ENST00000580287 RRP7AQ9Y3A4 280 aaKnown RBP16.75■□□□□ 0.27
CDK5RAP3-217ENST00000580287 OVOS2A0A0J9YW53 1432 aa16.75■□□□□ 0.27
CDK5RAP3-217ENST00000580287 MST1RQ04912 1400 aa16.75■□□□□ 0.27
CDK5RAP3-217ENST00000580287 OVOS2Q6IE36 1432 aa16.75■□□□□ 0.27
CDK5RAP3-217ENST00000580287 DIAPH1O60610 1272 aaKnown RBP16.75■□□□□ 0.27
CDK5RAP3-217ENST00000580287 KRT28Q7Z3Y7 464 aa16.75■□□□□ 0.27
CDK5RAP3-217ENST00000580287 DMRT2Q9Y5R5 561 aa16.75■□□□□ 0.27
CDK5RAP3-217ENST00000580287 BLMP54132 1417 aaPredicted RBP16.74■□□□□ 0.27
CDK5RAP3-217ENST00000580287 NRKQ7Z2Y5 1582 aa16.74■□□□□ 0.27
CDK5RAP3-217ENST00000580287 HSP90AB2PQ58FF8 381 aa16.74■□□□□ 0.27
CDK5RAP3-217ENST00000580287 PHF23Q9BUL5 403 aaPredicted RBP16.73■□□□□ 0.27
CDK5RAP3-217ENST00000580287 SMG6Q86US8 1419 aaKnown RBP16.73■□□□□ 0.27
CDK5RAP3-217ENST00000580287 HMOX1P09601 288 aa16.72■□□□□ 0.27
CDK5RAP3-217ENST00000580287 MAP3K19Q56UN5 1328 aa16.72■□□□□ 0.27
CDK5RAP3-217ENST00000580287 PNPLA6Q8IY17 1366 aa16.72■□□□□ 0.27
CDK5RAP3-217ENST00000580287 ZBTB7CA1YPR0 619 aa16.72■□□□□ 0.27
CDK5RAP3-217ENST00000580287 ANKRD26Q9UPS8 1709 aa16.72■□□□□ 0.27
CDK5RAP3-217ENST00000580287 SLAIN2Q9P270 581 aa16.71■□□□□ 0.27
CDK5RAP3-217ENST00000580287 AATKQ6ZMQ8 1374 aa16.71■□□□□ 0.27
CDK5RAP3-217ENST00000580287 COL3A1P02461 1466 aaPredicted RBP16.71■□□□□ 0.26
CDK5RAP3-217ENST00000580287 BRINP3Q76B58 766 aa16.7■□□□□ 0.26
CDK5RAP3-217ENST00000580287 SHPRHQ149N8 1683 aa16.7■□□□□ 0.26
CDK5RAP3-217ENST00000580287 USP31Q70CQ4 1352 aa16.7■□□□□ 0.26
CDK5RAP3-217ENST00000580287 IL13P35225 146 aa16.69■□□□□ 0.26
CDK5RAP3-217ENST00000580287 PPP4R2Q9NY27 417 aa16.69■□□□□ 0.26
CDK5RAP3-217ENST00000580287 PIK3C2AO00443 1686 aa16.69■□□□□ 0.26
CDK5RAP3-217ENST00000580287 NCOA3Q9Y6Q9 1424 aa16.69■□□□□ 0.26
CDK5RAP3-217ENST00000580287 MAP2P11137 1827 aaKnown RBP16.69■□□□□ 0.26
CDK5RAP3-217ENST00000580287 TCP11L2Q8N4U5 519 aa16.69■□□□□ 0.26
CDK5RAP3-217ENST00000580287 XIRP1Q702N8 1843 aaKnown RBP16.68■□□□□ 0.26
CDK5RAP3-217ENST00000580287 AMPHP49418 695 aa16.68■□□□□ 0.26
CDK5RAP3-217ENST00000580287 EIF4A2Q14240 407 aaKnown RBP16.67■□□□□ 0.26
CDK5RAP3-217ENST00000580287 CABLES1Q8TDN4 633 aa16.67■□□□□ 0.26
CDK5RAP3-217ENST00000580287 RUNDC1Q96C34 613 aa16.67■□□□□ 0.26
CDK5RAP3-217ENST00000580287 TPRNQ4KMQ1 711 aa16.67■□□□□ 0.26
CDK5RAP3-217ENST00000580287 DCCP43146 1447 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms