RNA–Protein interactions for RNA: ENST00000579081.5

NF1-219, Transcript of neurofibromin 1, humanhuman

TSL 1 (best)

Gene NF1, Length 8,788 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-219ENST00000579081 PRPF40AO75400 957 aaKnown RBP6.09□□□□□ -1.43
NF1-219ENST00000579081 RIC3Q7Z5B4 369 aa6.09□□□□□ -1.43
NF1-219ENST00000579081 NLRP13Q86W25 1043 aa6.09□□□□□ -1.43
NF1-219ENST00000579081 PLIN1O60240 522 aa6.09□□□□□ -1.43
NF1-219ENST00000579081 SDF4Q9BRK5 362 aa6.09□□□□□ -1.43
NF1-219ENST00000579081 BCL2L13Q9BXK5 485 aa6.09□□□□□ -1.43
NF1-219ENST00000579081 TBC1D2BQ9UPU7 963 aa6.09□□□□□ -1.43
NF1-219ENST00000579081 FOXD1Q16676 465 aa6.09□□□□□ -1.43
NF1-219ENST00000579081 EFCAB5A4FU69 1503 aa6.09□□□□□ -1.43
NF1-219ENST00000579081 MPHOSPH10O00566 681 aaKnown RBP6.09□□□□□ -1.43
NF1-219ENST00000579081 FKBP5Q13451 457 aaPredicted RBP6.09□□□□□ -1.43
NF1-219ENST00000579081 MBD3O95983 291 aa6.09□□□□□ -1.44
NF1-219ENST00000579081 RAPGEF4Q8WZA2 1011 aa6.09□□□□□ -1.44
NF1-219ENST00000579081 PPP1R1BQ9UD71 204 aaPredicted RBP6.09□□□□□ -1.44
NF1-219ENST00000579081 PSME1Q06323 249 aa6.09□□□□□ -1.44
NF1-219ENST00000579081 ATP2B1P20020 1258 aa6.08□□□□□ -1.44
NF1-219ENST00000579081 DDX11Q96FC9 970 aa6.08□□□□□ -1.44
NF1-219ENST00000579081 EIF4G1Q04637 1599 aaKnown RBP6.08□□□□□ -1.44
NF1-219ENST00000579081 GOLGA6L10A6NI86 522 aa6.08□□□□□ -1.44
NF1-219ENST00000579081 NF2P35240 595 aa6.08□□□□□ -1.44
NF1-219ENST00000579081 NUCB2P80303 420 aa6.08□□□□□ -1.44
NF1-219ENST00000579081 RIPPLY1Q0D2K3 151 aa6.08□□□□□ -1.44
NF1-219ENST00000579081 INTS3Q68E01 1043 aaKnown RBP6.08□□□□□ -1.44
NF1-219ENST00000579081 ZNHIT6Q9NWK9 470 aaKnown RBP6.08□□□□□ -1.44
NF1-219ENST00000579081 ZBED9Q6R2W3 1325 aa6.08□□□□□ -1.44
NF1-219ENST00000579081 IQCEQ6IPM2 695 aa6.08□□□□□ -1.44
NF1-219ENST00000579081 LMNB2Q03252 620 aa6.08□□□□□ -1.44
NF1-219ENST00000579081 RABEP1Q15276 862 aa6.08□□□□□ -1.44
NF1-219ENST00000579081 CCDC112Q8NEF3 446 aa6.08□□□□□ -1.44
NF1-219ENST00000579081 ZNF428Q96B54 188 aa6.08□□□□□ -1.44
NF1-219ENST00000579081 DEF6Q9H4E7 631 aa6.08□□□□□ -1.44
NF1-219ENST00000579081 LUC7LQ9NQ29 371 aaKnown RBP6.08□□□□□ -1.44
NF1-219ENST00000579081 BRPF1P55201 1214 aaPredicted RBP6.07□□□□□ -1.44
NF1-219ENST00000579081 LEKR1Q6ZMV7 388 aa6.07□□□□□ -1.44
NF1-219ENST00000579081 FEZ1Q99689 392 aa6.07□□□□□ -1.44
NF1-219ENST00000579081 GSE1Q14687 1217 aa6.07□□□□□ -1.44
NF1-219ENST00000579081 PSMA5P28066 241 aa6.07□□□□□ -1.44
NF1-219ENST00000579081 GTPBP4Q9BZE4 634 aaKnown RBP6.07□□□□□ -1.44
NF1-219ENST00000579081 DDX19BQ9UMR2 479 aa6.07□□□□□ -1.44
NF1-219ENST00000579081 KIF21AQ7Z4S6 1674 aa6.07□□□□□ -1.44
NF1-219ENST00000579081 GOLGA6L10A0A0M3HER8 536 aa6.07□□□□□ -1.44
NF1-219ENST00000579081 SMC2O95347 1197 aa6.07□□□□□ -1.44
NF1-219ENST00000579081 TAX1BP1Q86VP1 789 aa6.07□□□□□ -1.44
NF1-219ENST00000579081 ZHX3Q9H4I2 956 aa6.07□□□□□ -1.44
NF1-219ENST00000579081 PLEKHH1Q9ULM0 1364 aa6.07□□□□□ -1.44
NF1-219ENST00000579081 IBSPP21815 317 aaPredicted RBP6.07□□□□□ -1.44
NF1-219ENST00000579081 ATP2B2Q01814 1243 aa6.07□□□□□ -1.44
NF1-219ENST00000579081 FAM177BA6PVY3 158 aa6.07□□□□□ -1.44
NF1-219ENST00000579081 CCDC181Q5TID7 509 aa6.07□□□□□ -1.44
NF1-219ENST00000579081 POLA1P09884 1462 aaPredicted RBP6.07□□□□□ -1.44
NF1-219ENST00000579081 MPHOSPH9Q99550 1183 aa6.07□□□□□ -1.44
NF1-219ENST00000579081 CARMIL2Q6F5E8 1435 aa6.07□□□□□ -1.44
NF1-219ENST00000579081 RRBP1Q9P2E9 1410 aaKnown RBP6.07□□□□□ -1.44
NF1-219ENST00000579081 KIAA0754O94854 1291 aa6.06□□□□□ -1.44
NF1-219ENST00000579081 AIMP1Q12904 312 aaKnown RBP6.06□□□□□ -1.44
NF1-219ENST00000579081 TANGO6Q9C0B7 1094 aa6.06□□□□□ -1.44
NF1-219ENST00000579081 MRE11P49959 708 aa6.06□□□□□ -1.44
NF1-219ENST00000579081 TRIM21P19474 475 aaKnown RBP6.06□□□□□ -1.44
NF1-219ENST00000579081 SARNPP82979 210 aaKnown RBP6.06□□□□□ -1.44
NF1-219ENST00000579081 CCDC39Q9UFE4 941 aa6.06□□□□□ -1.44
NF1-219ENST00000579081 COG6Q9Y2V7 657 aa6.06□□□□□ -1.44
NF1-219ENST00000579081 DIAPH1O60610 1272 aaKnown RBP6.06□□□□□ -1.44
NF1-219ENST00000579081 THOC2Q8NI27 1593 aaKnown RBP6.06□□□□□ -1.44
NF1-219ENST00000579081 MATR3P43243 847 aaKnown RBP eCLIP6.06□□□□□ -1.441e-6■■■■■ 31.1
NF1-219ENST00000579081 DNAI2Q9GZS0 605 aa6.06□□□□□ -1.44
NF1-219ENST00000579081 TSPYL4Q9UJ04 414 aa6.06□□□□□ -1.44
NF1-219ENST00000579081 EVC2Q86UK5 1308 aa6.06□□□□□ -1.44
NF1-219ENST00000579081 FSD1Q9BTV5 496 aa6.06□□□□□ -1.44
NF1-219ENST00000579081 PDE4AP27815 886 aa6.05□□□□□ -1.44
NF1-219ENST00000579081 SOGA3Q5TF21 947 aa6.05□□□□□ -1.44
NF1-219ENST00000579081 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.05□□□□□ -1.44
NF1-219ENST00000579081 NEMFO60524 1076 aa6.05□□□□□ -1.44
NF1-219ENST00000579081 POTEB2H3BUK9 544 aa6.05□□□□□ -1.44
NF1-219ENST00000579081 PODNQ7Z5L7 613 aa6.05□□□□□ -1.44
NF1-219ENST00000579081 SEPT11Q9NVA2 429 aaKnown RBP6.05□□□□□ -1.44
NF1-219ENST00000579081 CALCOCO1Q9P1Z2 691 aa6.05□□□□□ -1.44
NF1-219ENST00000579081 ATF3P18847 181 aa6.05□□□□□ -1.44
NF1-219ENST00000579081 NLRP2Q9NX02 1062 aa6.05□□□□□ -1.44
NF1-219ENST00000579081 STIM1Q13586 685 aa6.05□□□□□ -1.44
NF1-219ENST00000579081 V9GYY5 206 aaPredicted RBP6.05□□□□□ -1.44
NF1-219ENST00000579081 TRIM5Q9C035 493 aa6.05□□□□□ -1.44
NF1-219ENST00000579081 GNL3LQ9NVN8 582 aaKnown RBP6.05□□□□□ -1.44
NF1-219ENST00000579081 PPP6R1Q9UPN7 881 aa6.05□□□□□ -1.44
NF1-219ENST00000579081 DAPK1P53355 1430 aa6.05□□□□□ -1.44
NF1-219ENST00000579081 KIF20AO95235 890 aa6.05□□□□□ -1.44
NF1-219ENST00000579081 STK11IPQ8N1F8 1099 aa6.05□□□□□ -1.44
NF1-219ENST00000579081 GBP3Q9H0R5 595 aa6.05□□□□□ -1.44
NF1-219ENST00000579081 ARHGAP35Q9NRY4 1499 aa6.05□□□□□ -1.44
NF1-219ENST00000579081 VGFO15240 615 aaPredicted RBP6.04□□□□□ -1.44
NF1-219ENST00000579081 KINO60870 393 aaKnown RBP6.04□□□□□ -1.44
NF1-219ENST00000579081 DDX12PQ92771 950 aa6.04□□□□□ -1.44
NF1-219ENST00000579081 ZNF396Q96N95 335 aaPredicted RBP6.04□□□□□ -1.44
NF1-219ENST00000579081 KIF6Q6ZMV9 814 aa6.04□□□□□ -1.44
NF1-219ENST00000579081 CLASRPQ8N2M8 674 aaKnown RBP6.04□□□□□ -1.44
NF1-219ENST00000579081 STAMBPO95630 424 aa6.04□□□□□ -1.44
NF1-219ENST00000579081 GRIPAP1Q4V328 841 aa6.04□□□□□ -1.44
NF1-219ENST00000579081 CCDC91Q7Z6B0 441 aa6.04□□□□□ -1.44
NF1-219ENST00000579081 DZIP1LQ8IYY4 767 aaKnown RBP6.04□□□□□ -1.44
NF1-219ENST00000579081 DACH1Q9UI36 760 aa6.04□□□□□ -1.44
NF1-219ENST00000579081 MINK1Q8N4C8 1332 aaPredicted RBP6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms