RNA–Protein interactions for RNA: ENST00000579040.5

SSH2-208, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-208ENST00000579040 CCDC61Q9Y6R9 512 aa16.62■□□□□ 0.25
SSH2-208ENST00000579040 BRWD3Q6RI45 1802 aa16.61■□□□□ 0.25
SSH2-208ENST00000579040 VPS72Q15906 364 aa16.61■□□□□ 0.25
SSH2-208ENST00000579040 PHRF1Q9P1Y6 1649 aaKnown RBP16.6■□□□□ 0.25
SSH2-208ENST00000579040 PLEKHG3A1L390 1219 aa16.6■□□□□ 0.25
SSH2-208ENST00000579040 PLEKHG5O94827 1062 aa16.6■□□□□ 0.25
SSH2-208ENST00000579040 SIN3AQ96ST3 1273 aa16.6■□□□□ 0.25
SSH2-208ENST00000579040 FAM83GA6ND36 823 aa16.59■□□□□ 0.25
SSH2-208ENST00000579040 PAK3O75914 559 aaPredicted RBP16.59■□□□□ 0.25
SSH2-208ENST00000579040 ACEP12821 1306 aa16.58■□□□□ 0.24
SSH2-208ENST00000579040 NEUROD1Q13562 356 aa16.57■□□□□ 0.24
SSH2-208ENST00000579040 PPIP5K1Q6PFW1 1433 aa16.56■□□□□ 0.24
SSH2-208ENST00000579040 SRPK2P78362 688 aaKnown RBP16.56■□□□□ 0.24
SSH2-208ENST00000579040 NBPF8Q3BBV2 869 aa16.56■□□□□ 0.24
SSH2-208ENST00000579040 BRD4O60885 1362 aaPredicted RBP16.55■□□□□ 0.24
SSH2-208ENST00000579040 ROCK2O75116 1388 aaKnown RBP16.55■□□□□ 0.24
SSH2-208ENST00000579040 ONECUT3O60422 494 aaPredicted RBP16.55■□□□□ 0.24
SSH2-208ENST00000579040 CCDC125Q86Z20 511 aa16.55■□□□□ 0.24
SSH2-208ENST00000579040 CCDC9Q9Y3X0 531 aaKnown RBP16.55■□□□□ 0.24
SSH2-208ENST00000579040 PRDM11Q9NQV5 511 aa16.54■□□□□ 0.24
SSH2-208ENST00000579040 BTG4Q9NY30 223 aa16.54■□□□□ 0.24
SSH2-208ENST00000579040 NRKQ7Z2Y5 1582 aa16.53■□□□□ 0.24
SSH2-208ENST00000579040 SEPT12Q8IYM1 358 aa16.53■□□□□ 0.24
SSH2-208ENST00000579040 EVC2Q86UK5 1308 aa16.52■□□□□ 0.24
SSH2-208ENST00000579040 CABP2Q9NPB3 220 aa16.52■□□□□ 0.24
SSH2-208ENST00000579040 KIAA0232Q92628 1395 aa16.51■□□□□ 0.23
SSH2-208ENST00000579040 USP19O94966 1318 aa16.5■□□□□ 0.23
SSH2-208ENST00000579040 EP400Q96L91 3159 aa16.5■□□□□ 0.23
SSH2-208ENST00000579040 ABTB2Q8N961 1025 aa16.5■□□□□ 0.23
SSH2-208ENST00000579040 BLMP54132 1417 aaPredicted RBP16.5■□□□□ 0.23
SSH2-208ENST00000579040 SPATA31A5Q5VU36 1347 aa16.49■□□□□ 0.23
SSH2-208ENST00000579040 SPATA31A7Q8IWB4 1347 aa16.49■□□□□ 0.23
SSH2-208ENST00000579040 AKAP12Q02952 1782 aa16.49■□□□□ 0.23
SSH2-208ENST00000579040 USP6P35125 1406 aa16.49■□□□□ 0.23
SSH2-208ENST00000579040 THSD7AQ9UPZ6 1657 aa16.49■□□□□ 0.23
SSH2-208ENST00000579040 NUTM2GQ5VZR2 741 aa16.48■□□□□ 0.23
SSH2-208ENST00000579040 KRT27Q7Z3Y8 459 aa16.48■□□□□ 0.23
SSH2-208ENST00000579040 NLRP13Q86W25 1043 aa16.48■□□□□ 0.23
SSH2-208ENST00000579040 LMO7Q8WWI1 1683 aa16.48■□□□□ 0.23
SSH2-208ENST00000579040 CPDO75976 1380 aa16.48■□□□□ 0.23
SSH2-208ENST00000579040 TONSLQ96HA7 1378 aa16.48■□□□□ 0.23
SSH2-208ENST00000579040 SBNO2Q9Y2G9 1366 aa16.48■□□□□ 0.23
SSH2-208ENST00000579040 TRIM26Q12899 539 aaPredicted RBP16.47■□□□□ 0.23
SSH2-208ENST00000579040 CABP1Q9NZU7 370 aa16.47■□□□□ 0.23
SSH2-208ENST00000579040 A0A0G2JS52 829 aa16.46■□□□□ 0.23
SSH2-208ENST00000579040 ZC3H6P61129 1189 aaKnown RBP16.46■□□□□ 0.23
SSH2-208ENST00000579040 MYT1Q01538 1121 aa16.46■□□□□ 0.23
SSH2-208ENST00000579040 FAM98CQ17RN3 349 aaKnown RBP16.46■□□□□ 0.23
SSH2-208ENST00000579040 CHRNA2Q15822 529 aa16.45■□□□□ 0.22
SSH2-208ENST00000579040 PIK3C2AO00443 1686 aa16.45■□□□□ 0.22
SSH2-208ENST00000579040 SLIT3O75094 1523 aa16.45■□□□□ 0.22
SSH2-208ENST00000579040 SSH2Q76I76 1423 aa16.45■□□□□ 0.22
SSH2-208ENST00000579040 SPATA31A1Q5TZJ5 1347 aa16.44■□□□□ 0.22
SSH2-208ENST00000579040 CAMTA1Q9Y6Y1 1673 aa16.43■□□□□ 0.22
SSH2-208ENST00000579040 RGPD1P0DJD0 1748 aa16.43■□□□□ 0.22
SSH2-208ENST00000579040 SF3B2Q13435 895 aaKnown RBP16.43■□□□□ 0.22
SSH2-208ENST00000579040 ZNF692Q9BU19 519 aaPredicted RBP16.43■□□□□ 0.22
SSH2-208ENST00000579040 CARD11Q9BXL7 1154 aa16.43■□□□□ 0.22
SSH2-208ENST00000579040 MON2Q7Z3U7 1717 aa16.42■□□□□ 0.22
SSH2-208ENST00000579040 GCP02774 474 aa16.42■□□□□ 0.22
SSH2-208ENST00000579040 STRN4Q9NRL3 753 aa16.42■□□□□ 0.22
SSH2-208ENST00000579040 NLRP6P59044 892 aa16.41■□□□□ 0.22
SSH2-208ENST00000579040 CPSF1Q10570 1443 aaKnown RBP16.41■□□□□ 0.22
SSH2-208ENST00000579040 EVA1CP58658 441 aa16.4■□□□□ 0.22
SSH2-208ENST00000579040 ZRANB1Q9UGI0 708 aa16.4■□□□□ 0.22
SSH2-208ENST00000579040 TTC21AQ8NDW8 1320 aa16.4■□□□□ 0.22
SSH2-208ENST00000579040 BARGINQ6ZT62 677 aa16.39■□□□□ 0.21
SSH2-208ENST00000579040 AATKQ6ZMQ8 1374 aa16.38■□□□□ 0.21
SSH2-208ENST00000579040 COL18A1P39060 1754 aa16.38■□□□□ 0.21
SSH2-208ENST00000579040 USP54Q70EL1 1684 aa16.38■□□□□ 0.21
SSH2-208ENST00000579040 COL5A2P05997 1499 aaPredicted RBP16.38■□□□□ 0.21
SSH2-208ENST00000579040 TTC21BQ7Z4L5 1316 aa16.38■□□□□ 0.21
SSH2-208ENST00000579040 TNS1Q9HBL0 1735 aaKnown RBP16.37■□□□□ 0.21
SSH2-208ENST00000579040 KTN1Q86UP2 1357 aaKnown RBP16.37■□□□□ 0.21
SSH2-208ENST00000579040 PARP4Q9UKK3 1724 aaKnown RBP16.36■□□□□ 0.21
SSH2-208ENST00000579040 LARP1Q6PKG0 1096 aaKnown RBP16.36■□□□□ 0.21
SSH2-208ENST00000579040 DEFB132Q7Z7B7 95 aa16.36■□□□□ 0.21
SSH2-208ENST00000579040 THRAP3Q9Y2W1 955 aaKnown RBP16.36■□□□□ 0.21
SSH2-208ENST00000579040 BAG6P46379 1132 aa16.35■□□□□ 0.21
SSH2-208ENST00000579040 TCP11L2Q8N4U5 519 aa16.35■□□□□ 0.21
SSH2-208ENST00000579040 KCNH5Q8NCM2 988 aa16.35■□□□□ 0.21
SSH2-208ENST00000579040 PUS7Q96PZ0 661 aaKnown RBP16.35■□□□□ 0.21
SSH2-208ENST00000579040 RGPD5Q99666 1765 aa16.35■□□□□ 0.21
SSH2-208ENST00000579040 CRB1P82279 1406 aa16.35■□□□□ 0.21
SSH2-208ENST00000579040 ABCC6O95255 1503 aa16.35■□□□□ 0.21
SSH2-208ENST00000579040 WNK3Q9BYP7 1800 aa16.34■□□□□ 0.21
SSH2-208ENST00000579040 USP35Q9P2H5 1018 aa16.34■□□□□ 0.21
SSH2-208ENST00000579040 DISP2A7MBM2 1401 aa16.34■□□□□ 0.21
SSH2-208ENST00000579040 FAM196AQ6ZSG2 479 aa16.33■□□□□ 0.2
SSH2-208ENST00000579040 CD163L1Q9NR16 1453 aa16.33■□□□□ 0.2
SSH2-208ENST00000579040 NFAT5O94916 1531 aa16.33■□□□□ 0.2
SSH2-208ENST00000579040 SLC24A1O60721 1099 aa16.32■□□□□ 0.2
SSH2-208ENST00000579040 FAM182BQ5T319 152 aa16.32■□□□□ 0.2
SSH2-208ENST00000579040 USP31Q70CQ4 1352 aa16.31■□□□□ 0.2
SSH2-208ENST00000579040 ZBTB7CA1YPR0 619 aa16.31■□□□□ 0.2
SSH2-208ENST00000579040 ARHGEF25Q86VW2 580 aa16.31■□□□□ 0.2
SSH2-208ENST00000579040 EDC4Q6P2E9 1401 aaKnown RBP16.3■□□□□ 0.2
SSH2-208ENST00000579040 NINLQ9Y2I6 1382 aa16.3■□□□□ 0.2
SSH2-208ENST00000579040 PDE3BQ13370 1112 aa16.3■□□□□ 0.2
SSH2-208ENST00000579040 HDGFL2Q7Z4V5 671 aaPredicted RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms