RNA–Protein interactions for RNA: ENST00000578887.1

RBFOX3-201, Transcript of RNA binding fox-1 homolog 3, humanhuman

TSL 2

Gene RBFOX3, Length 2,694 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3-201ENST00000578887 DZIP1LQ8IYY4 767 aaKnown RBP17.61■□□□□ 0.41
RBFOX3-201ENST00000578887 U2AF1L5P0DN76 240 aaPredicted RBP17.61■□□□□ 0.41
RBFOX3-201ENST00000578887 U2AF1Q01081 240 aaKnown RBP eCLIP17.61■□□□□ 0.41
RBFOX3-201ENST00000578887 CHMP5Q9NZZ3 219 aa17.61■□□□□ 0.41
RBFOX3-201ENST00000578887 EXOSC9Q06265 439 aaKnown RBP17.6■□□□□ 0.41
RBFOX3-201ENST00000578887 CHGAP10645 457 aaKnown RBP17.59■□□□□ 0.41
RBFOX3-201ENST00000578887 ZKSCAN2Q63HK3 967 aa17.59■□□□□ 0.41
RBFOX3-201ENST00000578887 PNNQ9H307 717 aaKnown RBP17.59■□□□□ 0.41
RBFOX3-201ENST00000578887 ZC3H13Q5T200 1668 aaKnown RBP17.59■□□□□ 0.41
RBFOX3-201ENST00000578887 GAS2L3Q86XJ1 694 aa17.59■□□□□ 0.41
RBFOX3-201ENST00000578887 ITPRIPQ8IWB1 547 aa17.59■□□□□ 0.41
RBFOX3-201ENST00000578887 PPP6R1Q9UPN7 881 aa17.59■□□□□ 0.41
RBFOX3-201ENST00000578887 SSH1Q8WYL5 1049 aa17.58■□□□□ 0.41
RBFOX3-201ENST00000578887 SMC4Q9NTJ3 1288 aa17.58■□□□□ 0.41
RBFOX3-201ENST00000578887 FOXD4L1Q9NU39 408 aa17.58■□□□□ 0.41
RBFOX3-201ENST00000578887 CLCN1P35523 988 aa17.57■□□□□ 0.4
RBFOX3-201ENST00000578887 ARHGEF40Q8TER5 1519 aa17.57■□□□□ 0.4
RBFOX3-201ENST00000578887 REREQ9P2R6 1566 aa17.57■□□□□ 0.4
RBFOX3-201ENST00000578887 GRPEL1Q9HAV7 217 aa17.56■□□□□ 0.4
RBFOX3-201ENST00000578887 CD2BP2O95400 341 aaKnown RBP17.56■□□□□ 0.4
RBFOX3-201ENST00000578887 NUTM2DQ5VT03 806 aaPredicted RBP17.56■□□□□ 0.4
RBFOX3-201ENST00000578887 STAC3Q96MF2 364 aa17.55■□□□□ 0.4
RBFOX3-201ENST00000578887 NEURL4Q96JN8 1562 aa17.55■□□□□ 0.4
RBFOX3-201ENST00000578887 TMEM57Q8N5G2 664 aa17.55■□□□□ 0.4
RBFOX3-201ENST00000578887 LNPKQ9C0E8 428 aa17.55■□□□□ 0.4
RBFOX3-201ENST00000578887 NOS1P29475 1434 aa17.55■□□□□ 0.4
RBFOX3-201ENST00000578887 SAMD1Q6SPF0 538 aaPredicted RBP17.55■□□□□ 0.4
RBFOX3-201ENST00000578887 MYH16Q9H6N6 1097 aa17.55■□□□□ 0.4
RBFOX3-201ENST00000578887 NOB1Q9ULX3 412 aaKnown RBP17.55■□□□□ 0.4
RBFOX3-201ENST00000578887 ADGRB3O60242 1522 aa17.54■□□□□ 0.4
RBFOX3-201ENST00000578887 AGLP35573 1532 aa17.54■□□□□ 0.4
RBFOX3-201ENST00000578887 IFT172Q9UG01 1749 aa17.54■□□□□ 0.4
RBFOX3-201ENST00000578887 MLECQ14165 292 aa17.54■□□□□ 0.4
RBFOX3-201ENST00000578887 TNPO1Q92973 898 aaKnown RBP17.54■□□□□ 0.4
RBFOX3-201ENST00000578887 ZMYM3Q14202 1370 aa17.54■□□□□ 0.4
RBFOX3-201ENST00000578887 DDIT3P35638 169 aa17.54■□□□□ 0.4
RBFOX3-201ENST00000578887 AAMPQ13685 434 aa17.54■□□□□ 0.4
RBFOX3-201ENST00000578887 HSCBQ8IWL3 235 aa17.54■□□□□ 0.4
RBFOX3-201ENST00000578887 ARHGAP31Q2M1Z3 1444 aa17.53■□□□□ 0.4
RBFOX3-201ENST00000578887 MRE11P49959 708 aa17.53■□□□□ 0.4
RBFOX3-201ENST00000578887 CCDC27Q2M243 656 aa17.53■□□□□ 0.4
RBFOX3-201ENST00000578887 SAFB2Q14151 953 aaKnown RBP eCLIP17.53■□□□□ 0.4
RBFOX3-201ENST00000578887 KIAA1210Q9ULL0 1709 aa17.52■□□□□ 0.4
RBFOX3-201ENST00000578887 U2SURPO15042 1029 aaKnown RBP17.52■□□□□ 0.4
RBFOX3-201ENST00000578887 RBM42Q9BTD8 480 aaKnown RBP17.52■□□□□ 0.4
RBFOX3-201ENST00000578887 TRIM35Q9UPQ4 493 aa17.52■□□□□ 0.4
RBFOX3-201ENST00000578887 TRHP20396 242 aaPredicted RBP17.52■□□□□ 0.39
RBFOX3-201ENST00000578887 HDAC1Q13547 482 aaPredicted RBP17.51■□□□□ 0.39
RBFOX3-201ENST00000578887 SMC5Q8IY18 1101 aa17.51■□□□□ 0.39
RBFOX3-201ENST00000578887 PIK3C2BO00750 1634 aa17.51■□□□□ 0.39
RBFOX3-201ENST00000578887 CLTCQ00610 1675 aaKnown RBP17.51■□□□□ 0.39
RBFOX3-201ENST00000578887 PREX1Q8TCU6 1659 aa17.51■□□□□ 0.39
RBFOX3-201ENST00000578887 ATF7IPQ6VMQ6 1270 aa17.51■□□□□ 0.39
RBFOX3-201ENST00000578887 KIF2CQ99661 725 aa17.5■□□□□ 0.39
RBFOX3-201ENST00000578887 MYOM2P54296 1465 aa17.49■□□□□ 0.39
RBFOX3-201ENST00000578887 ESPNB1AK53 854 aa17.49■□□□□ 0.39
RBFOX3-201ENST00000578887 FBXO31Q5XUX0 539 aaPredicted RBP17.49■□□□□ 0.39
RBFOX3-201ENST00000578887 CFAP53Q96M91 514 aa17.49■□□□□ 0.39
RBFOX3-201ENST00000578887 CABP2Q9NPB3 220 aa17.49■□□□□ 0.39
RBFOX3-201ENST00000578887 ZBTB40Q9NUA8 1239 aa17.49■□□□□ 0.39
RBFOX3-201ENST00000578887 PDE4CQ08493 712 aa17.49■□□□□ 0.39
RBFOX3-201ENST00000578887 TMPOP42166 694 aaKnown RBP17.48■□□□□ 0.39
RBFOX3-201ENST00000578887 C1orf115Q9H7X2 142 aa17.48■□□□□ 0.39
RBFOX3-201ENST00000578887 PPLO60437 1756 aa17.48■□□□□ 0.39
RBFOX3-201ENST00000578887 NCOA3Q9Y6Q9 1424 aa17.48■□□□□ 0.39
RBFOX3-201ENST00000578887 PLEKHF1Q96S99 279 aa17.48■□□□□ 0.39
RBFOX3-201ENST00000578887 SBNO2Q9Y2G9 1366 aa17.48■□□□□ 0.39
RBFOX3-201ENST00000578887 GGNBP2Q9H3C7 697 aa17.47■□□□□ 0.39
RBFOX3-201ENST00000578887 DDX19BQ9UMR2 479 aa17.47■□□□□ 0.39
RBFOX3-201ENST00000578887 MYO5BQ9ULV0 1848 aa17.47■□□□□ 0.39
RBFOX3-201ENST00000578887 IDI1Q13907 227 aa17.47■□□□□ 0.39
RBFOX3-201ENST00000578887 VSIG10Q8N0Z9 540 aa17.47■□□□□ 0.39
RBFOX3-201ENST00000578887 DDX11L8A8MPP1 907 aa17.46■□□□□ 0.39
RBFOX3-201ENST00000578887 RBM25P49756 843 aaKnown RBP17.46■□□□□ 0.39
RBFOX3-201ENST00000578887 HSP90AB1P08238 724 aaKnown RBP17.45■□□□□ 0.38
RBFOX3-201ENST00000578887 NUCB1Q02818 461 aa17.45■□□□□ 0.38
RBFOX3-201ENST00000578887 MYO3AQ8NEV4 1616 aa17.44■□□□□ 0.38
RBFOX3-201ENST00000578887 HSP90AA1P07900 732 aaKnown RBP17.44■□□□□ 0.38
RBFOX3-201ENST00000578887 FBLN1P23142 703 aa17.44■□□□□ 0.38
RBFOX3-201ENST00000578887 HSP90AA2PQ14568 343 aaPredicted RBP17.44■□□□□ 0.38
RBFOX3-201ENST00000578887 C14orf93Q9H972 538 aaKnown RBP17.44■□□□□ 0.38
RBFOX3-201ENST00000578887 NRXN1Q9ULB1 1477 aa17.44■□□□□ 0.38
RBFOX3-201ENST00000578887 SSFA2P28290 1259 aa17.44■□□□□ 0.38
RBFOX3-201ENST00000578887 QRICH2Q9H0J4 1663 aa17.43■□□□□ 0.38
RBFOX3-201ENST00000578887 CHD1LQ86WJ1 897 aa17.43■□□□□ 0.38
RBFOX3-201ENST00000578887 RAB3GAP1Q15042 981 aa17.43■□□□□ 0.38
RBFOX3-201ENST00000578887 RIPK4P57078 832 aa17.42■□□□□ 0.38
RBFOX3-201ENST00000578887 GAS2L2Q8NHY3 880 aa17.42■□□□□ 0.38
RBFOX3-201ENST00000578887 SNX21Q969T3 373 aa17.42■□□□□ 0.38
RBFOX3-201ENST00000578887 ADGRB2O60241 1585 aa17.41■□□□□ 0.38
RBFOX3-201ENST00000578887 ANKRD45Q5TZF3 282 aa17.41■□□□□ 0.38
RBFOX3-201ENST00000578887 SLC52A1Q9NWF4 448 aa17.41■□□□□ 0.38
RBFOX3-201ENST00000578887 NEXMIFQ5QGS0 1516 aa17.41■□□□□ 0.38
RBFOX3-201ENST00000578887 THUMPD2Q9BTF0 503 aaKnown RBP17.4■□□□□ 0.38
RBFOX3-201ENST00000578887 ADGRB1O14514 1584 aa17.4■□□□□ 0.38
RBFOX3-201ENST00000578887 TMEM131LA2VDJ0 1609 aa17.4■□□□□ 0.38
RBFOX3-201ENST00000578887 AK9Q5TCS8 1911 aa17.4■□□□□ 0.38
RBFOX3-201ENST00000578887 DNAJC5Q9H3Z4 198 aa17.4■□□□□ 0.38
RBFOX3-201ENST00000578887 TBC1D9Q6ZT07 1266 aa17.39■□□□□ 0.37
RBFOX3-201ENST00000578887 ZMYND15Q9H091 742 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms