RNA–Protein interactions for RNA: ENST00000578830.5

NUP85-208, Transcript of nucleoporin 85, human

TSL 5

Gene NUP85, Length 922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP85-208	ENST00000578830	TNS3	Q68CZ2	1445 aa		13.1	□□□□□ -0.31
NUP85-208	ENST00000578830	TMEM132E	Q6IEE7	984 aa		13.09	□□□□□ -0.31
NUP85-208	ENST00000578830	SIRT1	Q96EB6	747 aa		13.09	□□□□□ -0.31
NUP85-208	ENST00000578830	RGPD1	P0DJD0	1748 aa		13.08	□□□□□ -0.32
NUP85-208	ENST00000578830	TRPM3	Q9HCF6	1732 aa	Predicted RBP	13.08	□□□□□ -0.32
NUP85-208	ENST00000578830	VPS72	Q15906	364 aa		13.08	□□□□□ -0.32
NUP85-208	ENST00000578830	NRXN1	Q9ULB1	1477 aa		13.08	□□□□□ -0.32
NUP85-208	ENST00000578830	ONECUT3	O60422	494 aa	Predicted RBP	13.07	□□□□□ -0.32
NUP85-208	ENST00000578830	PSME1	Q06323	249 aa		13.07	□□□□□ -0.32
NUP85-208	ENST00000578830	SF3B2	Q13435	895 aa	Known RBP	13.07	□□□□□ -0.32
NUP85-208	ENST00000578830	SEPT12	Q8IYM1	358 aa		13.07	□□□□□ -0.32
NUP85-208	ENST00000578830	ALS2	Q96Q42	1657 aa		13.07	□□□□□ -0.32
NUP85-208	ENST00000578830	SBNO1	A3KN83	1393 aa		13.07	□□□□□ -0.32
NUP85-208	ENST00000578830	HAP1	P54257	671 aa	Predicted RBP	13.06	□□□□□ -0.32
NUP85-208	ENST00000578830	DEFB132	Q7Z7B7	95 aa		13.06	□□□□□ -0.32
NUP85-208	ENST00000578830	PHF8	Q9UPP1	1060 aa		13.06	□□□□□ -0.32
NUP85-208	ENST00000578830	COL14A1	Q05707	1796 aa	Known RBP	13.06	□□□□□ -0.32
NUP85-208	ENST00000578830	ARHGEF10	O15013	1369 aa		13.06	□□□□□ -0.32
NUP85-208	ENST00000578830	CRYBG1	Q9Y4K1	1723 aa		13.05	□□□□□ -0.32
NUP85-208	ENST00000578830	PRKAR2A	P13861	404 aa	Known RBP	13.05	□□□□□ -0.32
NUP85-208	ENST00000578830	ADGRB2	O60241	1585 aa		13.05	□□□□□ -0.32
NUP85-208	ENST00000578830	PRR29	P0C7W0	189 aa		13.04	□□□□□ -0.32
NUP85-208	ENST00000578830	TRIM26	Q12899	539 aa	Predicted RBP	13.04	□□□□□ -0.32
NUP85-208	ENST00000578830	KRT27	Q7Z3Y8	459 aa		13.04	□□□□□ -0.32
NUP85-208	ENST00000578830	CABLES1	Q8TDN4	633 aa		13.04	□□□□□ -0.32
NUP85-208	ENST00000578830	MPHOSPH9	Q99550	1183 aa		13.04	□□□□□ -0.32
NUP85-208	ENST00000578830	C14orf93	Q9H972	538 aa	Known RBP	13.04	□□□□□ -0.32
NUP85-208	ENST00000578830	DHX57	Q6P158	1386 aa	Known RBP	13.04	□□□□□ -0.32
NUP85-208	ENST00000578830	DLC1	Q96QB1	1528 aa		13.03	□□□□□ -0.32
NUP85-208	ENST00000578830	TNS1	Q9HBL0	1735 aa	Known RBP	13.03	□□□□□ -0.32
NUP85-208	ENST00000578830	CCDC9	Q9Y3X0	531 aa	Known RBP	13.03	□□□□□ -0.32
NUP85-208	ENST00000578830	ANKAR	Q7Z5J8	1434 aa		13.02	□□□□□ -0.33
NUP85-208	ENST00000578830	ITSN1	Q15811	1721 aa		13.02	□□□□□ -0.33
NUP85-208	ENST00000578830	FAM83G	A6ND36	823 aa		13.01	□□□□□ -0.33
NUP85-208	ENST00000578830	CHADL	Q6NUI6	762 aa		13.01	□□□□□ -0.33
NUP85-208	ENST00000578830	LMOD2	Q6P5Q4	547 aa		13.01	□□□□□ -0.33
NUP85-208	ENST00000578830	THSD7A	Q9UPZ6	1657 aa		13	□□□□□ -0.33
NUP85-208	ENST00000578830	BAG6	P46379	1132 aa		13	□□□□□ -0.33
NUP85-208	ENST00000578830	PRAM1	Q96QH2	718 aa		13	□□□□□ -0.33
NUP85-208	ENST00000578830	PLEKHG5	O94827	1062 aa		12.99	□□□□□ -0.33
NUP85-208	ENST00000578830	CFAP70	Q5T0N1	1121 aa		12.99	□□□□□ -0.33
NUP85-208	ENST00000578830	ACIN1	Q9UKV3	1341 aa	Known RBP	12.98	□□□□□ -0.33
NUP85-208	ENST00000578830	SAFB2	Q14151	953 aa	Known RBP eCLIP	12.98	□□□□□ -0.33
NUP85-208	ENST00000578830	PMFBP1	Q8TBY8	1022 aa		12.98	□□□□□ -0.33
NUP85-208	ENST00000578830	ADGRB1	O14514	1584 aa		12.98	□□□□□ -0.33
NUP85-208	ENST00000578830		A0A0G2JS52	829 aa		12.97	□□□□□ -0.33
NUP85-208	ENST00000578830	MYT1	Q01538	1121 aa		12.97	□□□□□ -0.33
NUP85-208	ENST00000578830	FAM98C	Q17RN3	349 aa	Known RBP	12.97	□□□□□ -0.33
NUP85-208	ENST00000578830	PCGF6	Q9BYE7	350 aa		12.97	□□□□□ -0.33
NUP85-208	ENST00000578830	BTG4	Q9NY30	223 aa		12.97	□□□□□ -0.33
NUP85-208	ENST00000578830	TULP4	Q9NRJ4	1543 aa		12.97	□□□□□ -0.33
NUP85-208	ENST00000578830	EIF3A	Q14152	1382 aa	Known RBP	12.96	□□□□□ -0.33
NUP85-208	ENST00000578830	PHRF1	Q9P1Y6	1649 aa	Known RBP	12.96	□□□□□ -0.33
NUP85-208	ENST00000578830	HRC	P23327	699 aa		12.96	□□□□□ -0.33
NUP85-208	ENST00000578830	POGK	Q9P215	609 aa		12.96	□□□□□ -0.33
NUP85-208	ENST00000578830	ARHGEF28	Q8N1W1	1705 aa	Known RBP	12.96	□□□□□ -0.34
NUP85-208	ENST00000578830	GPRASP1	Q5JY77	1395 aa		12.95	□□□□□ -0.34
NUP85-208	ENST00000578830	PSD	A5PKW4	1024 aa	Predicted RBP	12.95	□□□□□ -0.34
NUP85-208	ENST00000578830	HAX1	O00165	279 aa		12.95	□□□□□ -0.34
NUP85-208	ENST00000578830	DISP2	A7MBM2	1401 aa		12.95	□□□□□ -0.34
NUP85-208	ENST00000578830	SPATA31A5	Q5VU36	1347 aa		12.94	□□□□□ -0.34
NUP85-208	ENST00000578830	SPATA31A7	Q8IWB4	1347 aa		12.94	□□□□□ -0.34
NUP85-208	ENST00000578830	RREB1	Q92766	1687 aa		12.93	□□□□□ -0.34
NUP85-208	ENST00000578830	EN1	Q05925	392 aa	Predicted RBP	12.93	□□□□□ -0.34
NUP85-208	ENST00000578830	PRR36	Q9H6K5	1346 aa		12.92	□□□□□ -0.34
NUP85-208	ENST00000578830	HIRIP3	Q9BW71	556 aa	Predicted RBP	12.92	□□□□□ -0.34
NUP85-208	ENST00000578830	NUP188	Q5SRE5	1749 aa		12.91	□□□□□ -0.34
NUP85-208	ENST00000578830	TRAK1	Q9UPV9	953 aa		12.91	□□□□□ -0.34
NUP85-208	ENST00000578830	MINK1	Q8N4C8	1332 aa	Predicted RBP	12.9	□□□□□ -0.34
NUP85-208	ENST00000578830	TOPAZ1	Q8N9V7	1692 aa		12.9	□□□□□ -0.34
NUP85-208	ENST00000578830	WASL	O00401	505 aa	Predicted RBP	12.9	□□□□□ -0.34
NUP85-208	ENST00000578830	FAM182B	Q5T319	152 aa		12.9	□□□□□ -0.34
NUP85-208	ENST00000578830	PRDM11	Q9NQV5	511 aa		12.9	□□□□□ -0.34
NUP85-208	ENST00000578830	PAK3	O75914	559 aa	Predicted RBP	12.89	□□□□□ -0.35
NUP85-208	ENST00000578830	R3HDM1	Q15032	1099 aa	Known RBP	12.89	□□□□□ -0.35
NUP85-208	ENST00000578830	NGDN	Q8NEJ9	315 aa	Known RBP	12.89	□□□□□ -0.35
NUP85-208	ENST00000578830	ATP7B	P35670	1465 aa		12.89	□□□□□ -0.35
NUP85-208	ENST00000578830	SPATA31A1	Q5TZJ5	1347 aa		12.88	□□□□□ -0.35
NUP85-208	ENST00000578830	SBF2	Q86WG5	1849 aa		12.88	□□□□□ -0.35
NUP85-208	ENST00000578830	PARD3	Q8TEW0	1356 aa		12.87	□□□□□ -0.35
NUP85-208	ENST00000578830	KIAA0232	Q92628	1395 aa		12.87	□□□□□ -0.35
NUP85-208	ENST00000578830	EZH2	Q15910	746 aa	Known RBP	12.87	□□□□□ -0.35
NUP85-208	ENST00000578830	FAM196A	Q6ZSG2	479 aa		12.87	□□□□□ -0.35
NUP85-208	ENST00000578830	PARP4	Q9UKK3	1724 aa	Known RBP	12.87	□□□□□ -0.35
NUP85-208	ENST00000578830	LMO7	Q8WWI1	1683 aa		12.86	□□□□□ -0.35
NUP85-208	ENST00000578830	KIAA1210	Q9ULL0	1709 aa		12.86	□□□□□ -0.35
NUP85-208	ENST00000578830	EVX2	Q03828	476 aa		12.86	□□□□□ -0.35
NUP85-208	ENST00000578830	PROM2	Q8N271	834 aa		12.86	□□□□□ -0.35
NUP85-208	ENST00000578830	CAMKK2	Q96RR4	588 aa		12.86	□□□□□ -0.35
NUP85-208	ENST00000578830	NRK	Q7Z2Y5	1582 aa		12.86	□□□□□ -0.35
NUP85-208	ENST00000578830	RGPD3	A6NKT7	1758 aa	Predicted RBP	12.85	□□□□□ -0.35
NUP85-208	ENST00000578830	RGPD4	Q7Z3J3	1758 aa		12.85	□□□□□ -0.35
NUP85-208	ENST00000578830	TRIM37	O94972	964 aa		12.85	□□□□□ -0.35
NUP85-208	ENST00000578830	STAC3	Q96MF2	364 aa		12.85	□□□□□ -0.35
NUP85-208	ENST00000578830	CHRNA2	Q15822	529 aa		12.84	□□□□□ -0.35
NUP85-208	ENST00000578830	SP7	Q8TDD2	431 aa	Predicted RBP	12.84	□□□□□ -0.35
NUP85-208	ENST00000578830	DCAF11	Q8TEB1	546 aa		12.84	□□□□□ -0.35
NUP85-208	ENST00000578830	NUDT16	Q96DE0	195 aa	Known RBP	12.84	□□□□□ -0.35
NUP85-208	ENST00000578830	KDM2A	Q9Y2K7	1162 aa		12.84	□□□□□ -0.35
NUP85-208	ENST00000578830	RAB3GAP2	Q9H2M9	1393 aa		12.83	□□□□□ -0.36

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