RNA–Protein interactions for RNA: ENST00000578709.5

ERBB2-209, Transcript of erb-b2 receptor tyrosine kinase 2, human

TSL 4

Gene ERBB2, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERBB2-209	ENST00000578709	NUTM2B	A6NNL0	878 aa	Predicted RBP	33.1	■■■□□ 2.89
ERBB2-209	ENST00000578709	NUTM2E	B1AL46	878 aa	Predicted RBP	33.1	■■■□□ 2.89
ERBB2-209	ENST00000578709	LMOD2	Q6P5Q4	547 aa		33.1	■■■□□ 2.89
ERBB2-209	ENST00000578709	NUTM2A	Q8IVF1	878 aa	Predicted RBP	33.1	■■■□□ 2.89
ERBB2-209	ENST00000578709	MON2	Q7Z3U7	1717 aa		33.08	■■■□□ 2.89
ERBB2-209	ENST00000578709	KTN1	Q86UP2	1357 aa	Known RBP	33.08	■■■□□ 2.89
ERBB2-209	ENST00000578709	TERF2IP	Q9NYB0	399 aa		33.07	■■■□□ 2.88
ERBB2-209	ENST00000578709	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	33.06	■■■□□ 2.88
ERBB2-209	ENST00000578709	NRK	Q7Z2Y5	1582 aa		33.05	■■■□□ 2.88
ERBB2-209	ENST00000578709		A0A1W2PP64	1363 aa		33.05	■■■□□ 2.88
ERBB2-209	ENST00000578709	ABCA3	Q99758	1704 aa		33.03	■■■□□ 2.88
ERBB2-209	ENST00000578709	MYOM1	P52179	1685 aa		33.03	■■■□□ 2.88
ERBB2-209	ENST00000578709	TTC21B	Q7Z4L5	1316 aa		33.02	■■■□□ 2.88
ERBB2-209	ENST00000578709	ABTB2	Q8N961	1025 aa		33.02	■■■□□ 2.88
ERBB2-209	ENST00000578709	ANKRD36B	Q8N2N9	1353 aa		33.01	■■■□□ 2.88
ERBB2-209	ENST00000578709	MEX3C	Q5U5Q3	659 aa	Known RBP	33.01	■■■□□ 2.87
ERBB2-209	ENST00000578709	CABLES1	Q8TDN4	633 aa		33.01	■■■□□ 2.87
ERBB2-209	ENST00000578709	CRYBG1	Q9Y4K1	1723 aa		33.01	■■■□□ 2.87
ERBB2-209	ENST00000578709	TTC21A	Q8NDW8	1320 aa		33.01	■■■□□ 2.87
ERBB2-209	ENST00000578709	ZEB1	P37275	1124 aa	Predicted RBP	33	■■■□□ 2.87
ERBB2-209	ENST00000578709	C11orf95	C9JLR9	678 aa	Predicted RBP	32.99	■■■□□ 2.87
ERBB2-209	ENST00000578709	EDC4	Q6P2E9	1401 aa	Known RBP	32.99	■■■□□ 2.87
ERBB2-209	ENST00000578709	ADAMTS2	O95450	1211 aa		32.98	■■■□□ 2.87
ERBB2-209	ENST00000578709	PIK3C2A	O00443	1686 aa		32.97	■■■□□ 2.87
ERBB2-209	ENST00000578709	MARF1	Q9Y4F3	1742 aa	Known RBP	32.97	■■■□□ 2.87
ERBB2-209	ENST00000578709	NUTM2G	Q5VZR2	741 aa		32.96	■■■□□ 2.87
ERBB2-209	ENST00000578709	USP19	O94966	1318 aa		32.96	■■■□□ 2.87
ERBB2-209	ENST00000578709	PHF23	Q9BUL5	403 aa	Predicted RBP	32.95	■■■□□ 2.87
ERBB2-209	ENST00000578709	NLRP13	Q86W25	1043 aa		32.94	■■■□□ 2.86
ERBB2-209	ENST00000578709	PLEKHG5	O94827	1062 aa		32.93	■■■□□ 2.86
ERBB2-209	ENST00000578709	HAP1	P54257	671 aa	Predicted RBP	32.93	■■■□□ 2.86
ERBB2-209	ENST00000578709	PHRF1	Q9P1Y6	1649 aa	Known RBP	32.92	■■■□□ 2.86
ERBB2-209	ENST00000578709	NLRP6	P59044	892 aa		32.91	■■■□□ 2.86
ERBB2-209	ENST00000578709	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	32.91	■■■□□ 2.86
ERBB2-209	ENST00000578709	C8orf37	Q96NL8	207 aa		32.91	■■■□□ 2.86
ERBB2-209	ENST00000578709	POLR3GL	Q9BT43	218 aa		32.91	■■■□□ 2.86
ERBB2-209	ENST00000578709	RGS17	Q9UGC6	210 aa	Predicted RBP	32.91	■■■□□ 2.86
ERBB2-209	ENST00000578709	KIF7	Q2M1P5	1343 aa		32.91	■■■□□ 2.86
ERBB2-209	ENST00000578709	USP31	Q70CQ4	1352 aa		32.88	■■■□□ 2.85
ERBB2-209	ENST00000578709	USP54	Q70EL1	1684 aa		32.88	■■■□□ 2.85
ERBB2-209	ENST00000578709	NGLY1	Q96IV0	654 aa		32.87	■■■□□ 2.85
ERBB2-209	ENST00000578709	SLIT3	O75094	1523 aa		32.87	■■■□□ 2.85
ERBB2-209	ENST00000578709	AFF2	P51816	1311 aa		32.86	■■■□□ 2.85
ERBB2-209	ENST00000578709	NME9	Q86XW9	330 aa		32.86	■■■□□ 2.85
ERBB2-209	ENST00000578709	FNBP4	Q8N3X1	1017 aa	Predicted RBP	32.85	■■■□□ 2.85
ERBB2-209	ENST00000578709	CARD14	Q9BXL6	1004 aa		32.84	■■■□□ 2.85
ERBB2-209	ENST00000578709	GC	P02774	474 aa		32.83	■■■□□ 2.85
ERBB2-209	ENST00000578709	ZNF772	Q68DY9	489 aa	Predicted RBP	32.82	■■■□□ 2.84
ERBB2-209	ENST00000578709	CCDC7	Q96M83	1385 aa		32.82	■■■□□ 2.84
ERBB2-209	ENST00000578709	ZRANB1	Q9UGI0	708 aa		32.81	■■■□□ 2.84
ERBB2-209	ENST00000578709	SLIT2	O94813	1529 aa		32.81	■■■□□ 2.84
ERBB2-209	ENST00000578709	FAM83G	A6ND36	823 aa		32.8	■■■□□ 2.84
ERBB2-209	ENST00000578709	CPD	O75976	1380 aa		32.8	■■■□□ 2.84
ERBB2-209	ENST00000578709	NSD3	Q9BZ95	1437 aa		32.79	■■■□□ 2.84
ERBB2-209	ENST00000578709	KIAA0232	Q92628	1395 aa		32.79	■■■□□ 2.84
ERBB2-209	ENST00000578709	WASHC2A	Q641Q2	1341 aa		32.78	■■■□□ 2.84
ERBB2-209	ENST00000578709	OVOS2	A0A0J9YW53	1432 aa		32.78	■■■□□ 2.84
ERBB2-209	ENST00000578709	OVOS2	Q6IE36	1432 aa		32.78	■■■□□ 2.84
ERBB2-209	ENST00000578709	COL14A1	Q05707	1796 aa	Known RBP	32.78	■■■□□ 2.84
ERBB2-209	ENST00000578709	PANK3	Q9H999	370 aa		32.77	■■■□□ 2.84
ERBB2-209	ENST00000578709	BCL9L	Q86UU0	1499 aa		32.77	■■■□□ 2.84
ERBB2-209	ENST00000578709	PLCH1	Q4KWH8	1693 aa		32.76	■■■□□ 2.84
ERBB2-209	ENST00000578709	ZC3H6	P61129	1189 aa	Known RBP	32.76	■■■□□ 2.83
ERBB2-209	ENST00000578709	KCNH5	Q8NCM2	988 aa		32.76	■■■□□ 2.83
ERBB2-209	ENST00000578709	PRDM11	Q9NQV5	511 aa		32.76	■■■□□ 2.83
ERBB2-209	ENST00000578709	NWD2	Q9ULI1	1742 aa		32.76	■■■□□ 2.83
ERBB2-209	ENST00000578709	FYB1	O15117	783 aa		32.75	■■■□□ 2.83
ERBB2-209	ENST00000578709	POTEA	Q6S8J7	498 aa		32.75	■■■□□ 2.83
ERBB2-209	ENST00000578709	USP21	Q9UK80	565 aa		32.75	■■■□□ 2.83
ERBB2-209	ENST00000578709	NFAT5	O94916	1531 aa		32.74	■■■□□ 2.83
ERBB2-209	ENST00000578709	KIF20B	Q96Q89	1820 aa		32.73	■■■□□ 2.83
ERBB2-209	ENST00000578709	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	32.73	■■■□□ 2.83
ERBB2-209	ENST00000578709	COG3	Q96JB2	828 aa		32.71	■■■□□ 2.83
ERBB2-209	ENST00000578709	UNC5CL	Q8IV45	518 aa		32.7	■■■□□ 2.83
ERBB2-209	ENST00000578709	CGNL1	Q0VF96	1302 aa		32.7	■■■□□ 2.82
ERBB2-209	ENST00000578709	CHRNA2	Q15822	529 aa		32.69	■■■□□ 2.82
ERBB2-209	ENST00000578709	ATRN	O75882	1429 aa		32.68	■■■□□ 2.82
ERBB2-209	ENST00000578709	GGNBP2	Q9H3C7	697 aa		32.68	■■■□□ 2.82
ERBB2-209	ENST00000578709	LMO7	Q8WWI1	1683 aa		32.67	■■■□□ 2.82
ERBB2-209	ENST00000578709	ARHGEF25	Q86VW2	580 aa		32.67	■■■□□ 2.82
ERBB2-209	ENST00000578709	QTRT2	Q9H974	415 aa	Known RBP	32.67	■■■□□ 2.82
ERBB2-209	ENST00000578709	BTG4	Q9NY30	223 aa		32.67	■■■□□ 2.82
ERBB2-209	ENST00000578709	TRPC5	Q9UL62	973 aa	Predicted RBP	32.67	■■■□□ 2.82
ERBB2-209	ENST00000578709	NRAP	Q86VF7	1730 aa		32.67	■■■□□ 2.82
ERBB2-209	ENST00000578709	AATK	Q6ZMQ8	1374 aa		32.66	■■■□□ 2.82
ERBB2-209	ENST00000578709	SOX12	O15370	315 aa		32.65	■■■□□ 2.82
ERBB2-209	ENST00000578709	COL18A1	P39060	1754 aa		32.63	■■■□□ 2.81
ERBB2-209	ENST00000578709	CAMTA1	Q9Y6Y1	1673 aa		32.62	■■■□□ 2.81
ERBB2-209	ENST00000578709	ABCC6	O95255	1503 aa		32.61	■■■□□ 2.81
ERBB2-209	ENST00000578709	VPS72	Q15906	364 aa		32.6	■■■□□ 2.81
ERBB2-209	ENST00000578709	KNSTRN	Q9Y448	316 aa		32.59	■■■□□ 2.81
ERBB2-209	ENST00000578709	NSD2	O96028	1365 aa		32.58	■■■□□ 2.81
ERBB2-209	ENST00000578709	LTN1	O94822	1766 aa		32.58	■■■□□ 2.81
ERBB2-209	ENST00000578709	RXRB	P28702	533 aa		32.58	■■■□□ 2.81
ERBB2-209	ENST00000578709	RBM6	P78332	1123 aa	Known RBP	32.58	■■■□□ 2.81
ERBB2-209	ENST00000578709	ILDR2	Q71H61	639 aa		32.58	■■■□□ 2.81
ERBB2-209	ENST00000578709	ANKRD26	Q9UPS8	1709 aa		32.57	■■■□□ 2.81
ERBB2-209	ENST00000578709	ZBTB7C	A1YPR0	619 aa		32.57	■■■□□ 2.8
ERBB2-209	ENST00000578709	PER1	O15534	1290 aa	Predicted RBP	32.57	■■■□□ 2.8
ERBB2-209	ENST00000578709	GJD4	Q96KN9	370 aa	Predicted RBP	32.55	■■■□□ 2.8

Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms