RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 C1orf167Q5SNV9 1468 aa22.85■■□□□ 1.25
SREBF1-218ENST00000578469 WAPLQ7Z5K2 1190 aa22.85■■□□□ 1.25
SREBF1-218ENST00000578469 CDK19Q9BWU1 502 aa22.84■■□□□ 1.25
SREBF1-218ENST00000578469 CARD14Q9BXL6 1004 aa22.84■■□□□ 1.25
SREBF1-218ENST00000578469 ADAMTS2O95450 1211 aa22.83■■□□□ 1.25
SREBF1-218ENST00000578469 ANKRD36BQ8N2N9 1353 aa22.83■■□□□ 1.25
SREBF1-218ENST00000578469 PLEKHH1Q9ULM0 1364 aa22.82■■□□□ 1.24
SREBF1-218ENST00000578469 PNISRQ8TF01 805 aaKnown RBP22.82■■□□□ 1.24
SREBF1-218ENST00000578469 NSD3Q9BZ95 1437 aa22.81■■□□□ 1.24
SREBF1-218ENST00000578469 TERF2IPQ9NYB0 399 aa22.79■■□□□ 1.24
SREBF1-218ENST00000578469 PPP2R1AP30153 589 aa22.78■■□□□ 1.24
SREBF1-218ENST00000578469 SOS2Q07890 1332 aaPredicted RBP22.78■■□□□ 1.24
SREBF1-218ENST00000578469 WASLO00401 505 aaPredicted RBP22.77■■□□□ 1.24
SREBF1-218ENST00000578469 USP21Q9UK80 565 aa22.77■■□□□ 1.24
SREBF1-218ENST00000578469 CGNL1Q0VF96 1302 aa22.77■■□□□ 1.24
SREBF1-218ENST00000578469 ROBO2Q9HCK4 1378 aa22.76■■□□□ 1.23
SREBF1-218ENST00000578469 USP32Q8NFA0 1604 aa22.76■■□□□ 1.23
SREBF1-218ENST00000578469 HDGFL2Q7Z4V5 671 aaPredicted RBP22.76■■□□□ 1.23
SREBF1-218ENST00000578469 TRPC5Q9UL62 973 aaPredicted RBP22.76■■□□□ 1.23
SREBF1-218ENST00000578469 NSD2O96028 1365 aa22.75■■□□□ 1.23
SREBF1-218ENST00000578469 ORAI2Q96SN7 254 aa22.74■■□□□ 1.23
SREBF1-218ENST00000578469 COL22A1Q8NFW1 1626 aaPredicted RBP22.72■■□□□ 1.23
SREBF1-218ENST00000578469 MORC1Q86VD1 984 aa22.72■■□□□ 1.23
SREBF1-218ENST00000578469 NPHP3Q7Z494 1330 aa22.71■■□□□ 1.23
SREBF1-218ENST00000578469 A0A1W2PP64 1363 aa22.71■■□□□ 1.23
SREBF1-218ENST00000578469 FNBP4Q8N3X1 1017 aaPredicted RBP22.7■■□□□ 1.22
SREBF1-218ENST00000578469 CABP1Q9NZU7 370 aa22.7■■□□□ 1.22
SREBF1-218ENST00000578469 GTF3C3Q9Y5Q9 886 aa22.7■■□□□ 1.22
SREBF1-218ENST00000578469 ZBED9Q6R2W3 1325 aa22.7■■□□□ 1.22
SREBF1-218ENST00000578469 CDC42BPGQ6DT37 1551 aa22.7■■□□□ 1.22
SREBF1-218ENST00000578469 ATP7BP35670 1465 aa22.69■■□□□ 1.22
SREBF1-218ENST00000578469 ATRNO75882 1429 aa22.69■■□□□ 1.22
SREBF1-218ENST00000578469 INSRP06213 1382 aa22.69■■□□□ 1.22
SREBF1-218ENST00000578469 ADGRB2O60241 1585 aa22.68■■□□□ 1.22
SREBF1-218ENST00000578469 NUDT16Q96DE0 195 aaKnown RBP22.67■■□□□ 1.22
SREBF1-218ENST00000578469 SRCAPQ6ZRS2 3230 aa22.67■■□□□ 1.22
SREBF1-218ENST00000578469 ESCO1Q5FWF5 840 aa22.66■■□□□ 1.22
SREBF1-218ENST00000578469 CCDC61Q9Y6R9 512 aa22.66■■□□□ 1.22
SREBF1-218ENST00000578469 ZRANB1Q9UGI0 708 aa22.65■■□□□ 1.22
SREBF1-218ENST00000578469 CD163L1Q9NR16 1453 aa22.65■■□□□ 1.22
SREBF1-218ENST00000578469 PPIP5K1Q6PFW1 1433 aa22.65■■□□□ 1.22
SREBF1-218ENST00000578469 WDR43Q15061 677 aaKnown RBP eCLIP22.64■■□□□ 1.21
SREBF1-218ENST00000578469 MARF1Q9Y4F3 1742 aaKnown RBP22.62■■□□□ 1.21
SREBF1-218ENST00000578469 PXDNQ92626 1479 aa22.62■■□□□ 1.21
SREBF1-218ENST00000578469 CCDC125Q86Z20 511 aa22.62■■□□□ 1.21
SREBF1-218ENST00000578469 EP400Q96L91 3159 aa22.6■■□□□ 1.21
SREBF1-218ENST00000578469 ZNF692Q9BU19 519 aaPredicted RBP22.59■■□□□ 1.21
SREBF1-218ENST00000578469 POLR3AO14802 1390 aaPredicted RBP22.59■■□□□ 1.21
SREBF1-218ENST00000578469 BCL9LQ86UU0 1499 aa22.59■■□□□ 1.21
SREBF1-218ENST00000578469 FOXO3O43524 673 aa22.58■■□□□ 1.21
SREBF1-218ENST00000578469 CFAP53Q96M91 514 aa22.58■■□□□ 1.21
SREBF1-218ENST00000578469 CPSF1Q10570 1443 aaKnown RBP22.57■■□□□ 1.2
SREBF1-218ENST00000578469 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.57■■□□□ 1.2
SREBF1-218ENST00000578469 FYB1O15117 783 aa22.57■■□□□ 1.2
SREBF1-218ENST00000578469 XPCQ01831 940 aaPredicted RBP22.57■■□□□ 1.2
SREBF1-218ENST00000578469 EDC4Q6P2E9 1401 aaKnown RBP22.57■■□□□ 1.2
SREBF1-218ENST00000578469 TNNT2P45379 298 aaPredicted RBP22.56■■□□□ 1.2
SREBF1-218ENST00000578469 GJD4Q96KN9 370 aaPredicted RBP22.56■■□□□ 1.2
SREBF1-218ENST00000578469 BLMP54132 1417 aaPredicted RBP22.56■■□□□ 1.2
SREBF1-218ENST00000578469 PRR36Q9H6K5 1346 aa22.56■■□□□ 1.2
SREBF1-218ENST00000578469 GGNBP2Q9H3C7 697 aa22.55■■□□□ 1.2
SREBF1-218ENST00000578469 KIF1AQ12756 1690 aa22.55■■□□□ 1.2
SREBF1-218ENST00000578469 PLEKHG3A1L390 1219 aa22.54■■□□□ 1.2
SREBF1-218ENST00000578469 ADAMTS8Q9UP79 889 aa22.54■■□□□ 1.2
SREBF1-218ENST00000578469 ANKRD26Q9UPS8 1709 aa22.54■■□□□ 1.2
SREBF1-218ENST00000578469 KIF20BQ96Q89 1820 aa22.52■■□□□ 1.2
SREBF1-218ENST00000578469 NUTM2FA1L443 756 aa22.52■■□□□ 1.2
SREBF1-218ENST00000578469 ITSN1Q15811 1721 aa22.51■■□□□ 1.19
SREBF1-218ENST00000578469 MTHFSP49914 203 aa22.51■■□□□ 1.19
SREBF1-218ENST00000578469 UNC5CLQ8IV45 518 aa22.51■■□□□ 1.19
SREBF1-218ENST00000578469 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.51■■□□□ 1.19
SREBF1-218ENST00000578469 ANKARQ7Z5J8 1434 aa22.5■■□□□ 1.19
SREBF1-218ENST00000578469 TOPAZ1Q8N9V7 1692 aa22.5■■□□□ 1.19
SREBF1-218ENST00000578469 HAP1P54257 671 aaPredicted RBP22.5■■□□□ 1.19
SREBF1-218ENST00000578469 FMN2Q9NZ56 1722 aa22.5■■□□□ 1.19
SREBF1-218ENST00000578469 AKAP12Q02952 1782 aa22.49■■□□□ 1.19
SREBF1-218ENST00000578469 SLIT2O94813 1529 aa22.49■■□□□ 1.19
SREBF1-218ENST00000578469 SPATA31A3Q5VYP0 1347 aa22.49■■□□□ 1.19
SREBF1-218ENST00000578469 MON2Q7Z3U7 1717 aa22.48■■□□□ 1.19
SREBF1-218ENST00000578469 GLI3P10071 1580 aa22.47■■□□□ 1.19
SREBF1-218ENST00000578469 PDE3BQ13370 1112 aa22.47■■□□□ 1.19
SREBF1-218ENST00000578469 ACEP12821 1306 aa22.47■■□□□ 1.19
SREBF1-218ENST00000578469 NEFLP07196 543 aa22.46■■□□□ 1.19
SREBF1-218ENST00000578469 SF3B2Q13435 895 aaKnown RBP22.46■■□□□ 1.19
SREBF1-218ENST00000578469 SMG6Q86US8 1419 aaKnown RBP22.46■■□□□ 1.19
SREBF1-218ENST00000578469 TNS3Q68CZ2 1445 aa22.45■■□□□ 1.18
SREBF1-218ENST00000578469 KRT28Q7Z3Y7 464 aa22.44■■□□□ 1.18
SREBF1-218ENST00000578469 COG3Q96JB2 828 aa22.44■■□□□ 1.18
SREBF1-218ENST00000578469 PSME1Q06323 249 aa22.43■■□□□ 1.18
SREBF1-218ENST00000578469 NGDNQ8NEJ9 315 aaKnown RBP22.43■■□□□ 1.18
SREBF1-218ENST00000578469 NUDCQ9Y266 331 aa22.43■■□□□ 1.18
SREBF1-218ENST00000578469 TTC21BQ7Z4L5 1316 aa22.42■■□□□ 1.18
SREBF1-218ENST00000578469 NME9Q86XW9 330 aa22.42■■□□□ 1.18
SREBF1-218ENST00000578469 USP6P35125 1406 aa22.41■■□□□ 1.18
SREBF1-218ENST00000578469 NGEFQ8N5V2 710 aa22.41■■□□□ 1.18
SREBF1-218ENST00000578469 SALL2Q9Y467 1007 aaPredicted RBP22.41■■□□□ 1.18
SREBF1-218ENST00000578469 SENP3-EIF4A1A0A087X0R7 540 aa22.4■■□□□ 1.18
SREBF1-218ENST00000578469 PHF8Q9UPP1 1060 aa22.4■■□□□ 1.18
SREBF1-218ENST00000578469 CCDC9Q9Y3X0 531 aaKnown RBP22.4■■□□□ 1.18
SREBF1-218ENST00000578469 NWD2Q9ULI1 1742 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms