RNA–Protein interactions for RNA: ENST00000578402.5

LIMD2-205, Transcript of LIM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD2, Length 1,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-205ENST00000578402 TTC21BQ7Z4L5 1316 aa30.61■■■□□ 2.49
LIMD2-205ENST00000578402 CFAP53Q96M91 514 aa30.61■■■□□ 2.49
LIMD2-205ENST00000578402 MTHFSP49914 203 aa30.6■■■□□ 2.49
LIMD2-205ENST00000578402 TTC21AQ8NDW8 1320 aa30.6■■■□□ 2.49
LIMD2-205ENST00000578402 C14orf37Q86TY3 774 aa30.59■■■□□ 2.49
LIMD2-205ENST00000578402 NGDNQ8NEJ9 315 aaKnown RBP30.58■■■□□ 2.49
LIMD2-205ENST00000578402 NME9Q86XW9 330 aa30.57■■■□□ 2.49
LIMD2-205ENST00000578402 RBM33Q96EV2 1170 aaKnown RBP30.57■■■□□ 2.49
LIMD2-205ENST00000578402 DCCP43146 1447 aa30.57■■■□□ 2.48
LIMD2-205ENST00000578402 SHPRHQ149N8 1683 aa30.57■■■□□ 2.48
LIMD2-205ENST00000578402 PMFBP1Q8TBY8 1022 aa30.57■■■□□ 2.48
LIMD2-205ENST00000578402 C19orf44Q9H6X5 657 aa30.57■■■□□ 2.48
LIMD2-205ENST00000578402 AATKQ6ZMQ8 1374 aa30.56■■■□□ 2.48
LIMD2-205ENST00000578402 COG3Q96JB2 828 aa30.56■■■□□ 2.48
LIMD2-205ENST00000578402 ADAMTS8Q9UP79 889 aa30.56■■■□□ 2.48
LIMD2-205ENST00000578402 TMEM94Q12767 1356 aa30.55■■■□□ 2.48
LIMD2-205ENST00000578402 OVOS2A0A0J9YW53 1432 aa30.54■■■□□ 2.48
LIMD2-205ENST00000578402 OVOS2Q6IE36 1432 aa30.54■■■□□ 2.48
LIMD2-205ENST00000578402 PHF8Q9UPP1 1060 aa30.53■■■□□ 2.48
LIMD2-205ENST00000578402 SMG6Q86US8 1419 aaKnown RBP30.52■■■□□ 2.48
LIMD2-205ENST00000578402 PNPLA6Q8IY17 1366 aa30.51■■■□□ 2.47
LIMD2-205ENST00000578402 COL3A1P02461 1466 aaPredicted RBP30.51■■■□□ 2.47
LIMD2-205ENST00000578402 USP31Q70CQ4 1352 aa30.49■■■□□ 2.47
LIMD2-205ENST00000578402 USP54Q70EL1 1684 aa30.48■■■□□ 2.47
LIMD2-205ENST00000578402 DMRT2Q9Y5R5 561 aa30.47■■■□□ 2.47
LIMD2-205ENST00000578402 KIF1AQ12756 1690 aa30.46■■■□□ 2.47
LIMD2-205ENST00000578402 LRRC7Q96NW7 1537 aa30.46■■■□□ 2.47
LIMD2-205ENST00000578402 POLKQ9UBT6 870 aa30.45■■■□□ 2.47
LIMD2-205ENST00000578402 ZRANB1Q9UGI0 708 aa30.45■■■□□ 2.47
LIMD2-205ENST00000578402 MAP2P11137 1827 aaKnown RBP30.45■■■□□ 2.46
LIMD2-205ENST00000578402 C1orf167Q5SNV9 1468 aa30.45■■■□□ 2.46
LIMD2-205ENST00000578402 PIK3C2AO00443 1686 aa30.45■■■□□ 2.46
LIMD2-205ENST00000578402 ESCO1Q5FWF5 840 aa30.44■■■□□ 2.46
LIMD2-205ENST00000578402 CDK12Q9NYV4 1490 aaPredicted RBP30.44■■■□□ 2.46
LIMD2-205ENST00000578402 ATF3P18847 181 aa30.42■■■□□ 2.46
LIMD2-205ENST00000578402 MST1RQ04912 1400 aa30.42■■■□□ 2.46
LIMD2-205ENST00000578402 NUDCQ9Y266 331 aa30.42■■■□□ 2.46
LIMD2-205ENST00000578402 MSH6P52701 1360 aa30.41■■■□□ 2.46
LIMD2-205ENST00000578402 XIRP1Q702N8 1843 aaKnown RBP30.41■■■□□ 2.46
LIMD2-205ENST00000578402 CADPS2Q86UW7 1296 aa30.4■■■□□ 2.46
LIMD2-205ENST00000578402 NGEFQ8N5V2 710 aa30.39■■■□□ 2.46
LIMD2-205ENST00000578402 PDE3BQ13370 1112 aa30.37■■■□□ 2.45
LIMD2-205ENST00000578402 DIAPH1O60610 1272 aaKnown RBP30.36■■■□□ 2.45
LIMD2-205ENST00000578402 ZNF335Q9H4Z2 1342 aaPredicted RBP30.35■■■□□ 2.45
LIMD2-205ENST00000578402 ORAI2Q96SN7 254 aa30.35■■■□□ 2.45
LIMD2-205ENST00000578402 PSME1Q06323 249 aa30.34■■■□□ 2.45
LIMD2-205ENST00000578402 MARF1Q9Y4F3 1742 aaKnown RBP30.34■■■□□ 2.45
LIMD2-205ENST00000578402 EMILIN1Q9Y6C2 1016 aa30.33■■■□□ 2.45
LIMD2-205ENST00000578402 RUNDC1Q96C34 613 aa30.32■■■□□ 2.44
LIMD2-205ENST00000578402 FBLN1P23142 703 aa30.31■■■□□ 2.44
LIMD2-205ENST00000578402 GTF3C3Q9Y5Q9 886 aa30.31■■■□□ 2.44
LIMD2-205ENST00000578402 U2AF1L5P0DN76 240 aaPredicted RBP30.3■■■□□ 2.44
LIMD2-205ENST00000578402 U2AF1Q01081 240 aaKnown RBP eCLIP30.3■■■□□ 2.44
LIMD2-205ENST00000578402 CCDC146Q8IYE0 955 aa30.3■■■□□ 2.44
LIMD2-205ENST00000578402 NLRP6P59044 892 aa30.29■■■□□ 2.44
LIMD2-205ENST00000578402 ABTB2Q8N961 1025 aa30.29■■■□□ 2.44
LIMD2-205ENST00000578402 TRPM3Q9HCF6 1732 aaPredicted RBP30.29■■■□□ 2.44
LIMD2-205ENST00000578402 PPM1GO15355 546 aaPredicted RBP30.28■■■□□ 2.44
LIMD2-205ENST00000578402 RRS1Q15050 365 aaKnown RBP30.28■■■□□ 2.44
LIMD2-205ENST00000578402 NCBP3Q53F19 620 aaKnown RBP30.28■■■□□ 2.44
LIMD2-205ENST00000578402 IQSEC2Q5JU85 1478 aa30.28■■■□□ 2.44
LIMD2-205ENST00000578402 PAK3O75914 559 aaPredicted RBP30.27■■■□□ 2.44
LIMD2-205ENST00000578402 KIF24Q5T7B8 1368 aa30.27■■■□□ 2.44
LIMD2-205ENST00000578402 APAF1O14727 1248 aa30.27■■■□□ 2.44
LIMD2-205ENST00000578402 FOXO3O43524 673 aa30.26■■■□□ 2.43
LIMD2-205ENST00000578402 PNNQ9H307 717 aaKnown RBP30.26■■■□□ 2.43
LIMD2-205ENST00000578402 ZNF521Q96K83 1311 aa30.25■■■□□ 2.43
LIMD2-205ENST00000578402 U2SURPO15042 1029 aaKnown RBP30.25■■■□□ 2.43
LIMD2-205ENST00000578402 SENP3-EIF4A1A0A087X0R7 540 aa30.24■■■□□ 2.43
LIMD2-205ENST00000578402 SALL2Q9Y467 1007 aaPredicted RBP30.24■■■□□ 2.43
LIMD2-205ENST00000578402 PEAK1Q9H792 1746 aa30.24■■■□□ 2.43
LIMD2-205ENST00000578402 IL13P35225 146 aa30.23■■■□□ 2.43
LIMD2-205ENST00000578402 SBNO1A3KN83 1393 aa30.23■■■□□ 2.43
LIMD2-205ENST00000578402 FLT4P35916 1363 aa30.21■■■□□ 2.43
LIMD2-205ENST00000578402 KRT28Q7Z3Y7 464 aa30.21■■■□□ 2.43
LIMD2-205ENST00000578402 MAP3K19Q56UN5 1328 aa30.2■■■□□ 2.43
LIMD2-205ENST00000578402 FCHSD2O94868 740 aa30.2■■■□□ 2.42
LIMD2-205ENST00000578402 NPHP3Q7Z494 1330 aa30.19■■■□□ 2.42
LIMD2-205ENST00000578402 PLEKHF1Q96S99 279 aa30.19■■■□□ 2.42
LIMD2-205ENST00000578402 ALS2Q96Q42 1657 aa30.18■■■□□ 2.42
LIMD2-205ENST00000578402 NFAT5O94916 1531 aa30.18■■■□□ 2.42
LIMD2-205ENST00000578402 TCP11L2Q8N4U5 519 aa30.17■■■□□ 2.42
LIMD2-205ENST00000578402 SLIT3O75094 1523 aa30.17■■■□□ 2.42
LIMD2-205ENST00000578402 KCNH5Q8NCM2 988 aa30.17■■■□□ 2.42
LIMD2-205ENST00000578402 RTL1A6NKG5 1358 aa30.16■■■□□ 2.42
LIMD2-205ENST00000578402 CCDC27Q2M243 656 aa30.16■■■□□ 2.42
LIMD2-205ENST00000578402 NUTM2GQ5VZR2 741 aa30.16■■■□□ 2.42
LIMD2-205ENST00000578402 GOLGA2Q08379 1002 aa30.14■■■□□ 2.42
LIMD2-205ENST00000578402 PHF23Q9BUL5 403 aaPredicted RBP30.14■■■□□ 2.42
LIMD2-205ENST00000578402 MAPK8IP3Q9UPT6 1336 aa30.14■■■□□ 2.42
LIMD2-205ENST00000578402 LTBP4Q8N2S1 1624 aa30.14■■■□□ 2.41
LIMD2-205ENST00000578402 PHRF1Q9P1Y6 1649 aaKnown RBP30.14■■■□□ 2.41
LIMD2-205ENST00000578402 SOX12O15370 315 aa30.13■■■□□ 2.41
LIMD2-205ENST00000578402 RSPH6AQ9H0K4 717 aa30.13■■■□□ 2.41
LIMD2-205ENST00000578402 USP19O94966 1318 aa30.13■■■□□ 2.41
LIMD2-205ENST00000578402 EIF4A2Q14240 407 aaKnown RBP30.12■■■□□ 2.41
LIMD2-205ENST00000578402 ILDR2Q71H61 639 aa30.12■■■□□ 2.41
LIMD2-205ENST00000578402 PXDNQ92626 1479 aa30.12■■■□□ 2.41
LIMD2-205ENST00000578402 RGPD1P0DJD0 1748 aa30.12■■■□□ 2.41
LIMD2-205ENST00000578402 AMPHP49418 695 aa30.12■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 6.3 ms