RNA–Protein interactions for RNA: ENST00000578397.5

PSMD11-207, Transcript of proteasome 26S subunit, non-ATPase 11, humanhuman

TSL 2

Gene PSMD11, Length 1,178 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD11-207ENST00000578397 CCDC61Q9Y6R9 512 aa20.07■□□□□ 0.8
PSMD11-207ENST00000578397 C1QBPQ07021 282 aaKnown RBP20.06■□□□□ 0.8
PSMD11-207ENST00000578397 CENPJQ9HC77 1338 aaPredicted RBP20.05■□□□□ 0.8
PSMD11-207ENST00000578397 PAK3O75914 559 aaPredicted RBP20.05■□□□□ 0.8
PSMD11-207ENST00000578397 PLEKHG3A1L390 1219 aa20.04■□□□□ 0.8
PSMD11-207ENST00000578397 FAM83GA6ND36 823 aa20.04■□□□□ 0.8
PSMD11-207ENST00000578397 VPS72Q15906 364 aa20.04■□□□□ 0.8
PSMD11-207ENST00000578397 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.04■□□□□ 0.8
PSMD11-207ENST00000578397 TRPM3Q9HCF6 1732 aaPredicted RBP20.04■□□□□ 0.8
PSMD11-207ENST00000578397 NEUROD1Q13562 356 aa20.03■□□□□ 0.8
PSMD11-207ENST00000578397 RALGAPBQ86X10 1494 aa20.03■□□□□ 0.8
PSMD11-207ENST00000578397 POLR3AO14802 1390 aaPredicted RBP20.02■□□□□ 0.8
PSMD11-207ENST00000578397 NBPF8Q3BBV2 869 aa20.01■□□□□ 0.79
PSMD11-207ENST00000578397 ACEP12821 1306 aa20.01■□□□□ 0.79
PSMD11-207ENST00000578397 ALS2Q96Q42 1657 aa20■□□□□ 0.79
PSMD11-207ENST00000578397 ITSN1Q15811 1721 aa20■□□□□ 0.79
PSMD11-207ENST00000578397 SRPK2P78362 688 aaKnown RBP20■□□□□ 0.79
PSMD11-207ENST00000578397 ONECUT3O60422 494 aaPredicted RBP19.98■□□□□ 0.79
PSMD11-207ENST00000578397 CCDC9Q9Y3X0 531 aaKnown RBP19.98■□□□□ 0.79
PSMD11-207ENST00000578397 GLI3P10071 1580 aa19.98■□□□□ 0.79
PSMD11-207ENST00000578397 ABCA3Q99758 1704 aa19.98■□□□□ 0.79
PSMD11-207ENST00000578397 NWD2Q9ULI1 1742 aa19.97■□□□□ 0.79
PSMD11-207ENST00000578397 CCDC125Q86Z20 511 aa19.97■□□□□ 0.79
PSMD11-207ENST00000578397 BTG4Q9NY30 223 aa19.97■□□□□ 0.79
PSMD11-207ENST00000578397 SEPT12Q8IYM1 358 aa19.96■□□□□ 0.79
PSMD11-207ENST00000578397 CABP2Q9NPB3 220 aa19.96■□□□□ 0.79
PSMD11-207ENST00000578397 ROCK2O75116 1388 aaKnown RBP19.95■□□□□ 0.79
PSMD11-207ENST00000578397 PRDM11Q9NQV5 511 aa19.95■□□□□ 0.78
PSMD11-207ENST00000578397 TOPAZ1Q8N9V7 1692 aa19.94■□□□□ 0.78
PSMD11-207ENST00000578397 EVC2Q86UK5 1308 aa19.94■□□□□ 0.78
PSMD11-207ENST00000578397 BRD4O60885 1362 aaPredicted RBP19.94■□□□□ 0.78
PSMD11-207ENST00000578397 PLCH1Q4KWH8 1693 aa19.94■□□□□ 0.78
PSMD11-207ENST00000578397 PPIP5K1Q6PFW1 1433 aa19.93■□□□□ 0.78
PSMD11-207ENST00000578397 ABTB2Q8N961 1025 aa19.92■□□□□ 0.78
PSMD11-207ENST00000578397 COL14A1Q05707 1796 aaKnown RBP19.92■□□□□ 0.78
PSMD11-207ENST00000578397 TRPM1Q7Z4N2 1603 aa19.91■□□□□ 0.78
PSMD11-207ENST00000578397 TRIM26Q12899 539 aaPredicted RBP19.91■□□□□ 0.78
PSMD11-207ENST00000578397 KIAA0232Q92628 1395 aa19.91■□□□□ 0.78
PSMD11-207ENST00000578397 NUTM2GQ5VZR2 741 aa19.9■□□□□ 0.78
PSMD11-207ENST00000578397 CABP1Q9NZU7 370 aa19.9■□□□□ 0.78
PSMD11-207ENST00000578397 SPATA31A5Q5VU36 1347 aa19.89■□□□□ 0.77
PSMD11-207ENST00000578397 KRT27Q7Z3Y8 459 aa19.89■□□□□ 0.77
PSMD11-207ENST00000578397 NLRP13Q86W25 1043 aa19.89■□□□□ 0.77
PSMD11-207ENST00000578397 SPATA31A7Q8IWB4 1347 aa19.89■□□□□ 0.77
PSMD11-207ENST00000578397 QRICH2Q9H0J4 1663 aa19.89■□□□□ 0.77
PSMD11-207ENST00000578397 CRYBG1Q9Y4K1 1723 aa19.89■□□□□ 0.77
PSMD11-207ENST00000578397 USP19O94966 1318 aa19.88■□□□□ 0.77
PSMD11-207ENST00000578397 ZC3H6P61129 1189 aaKnown RBP19.88■□□□□ 0.77
PSMD11-207ENST00000578397 FAM98CQ17RN3 349 aaKnown RBP19.88■□□□□ 0.77
PSMD11-207ENST00000578397 CHRNA2Q15822 529 aa19.87■□□□□ 0.77
PSMD11-207ENST00000578397 NRAPQ86VF7 1730 aa19.87■□□□□ 0.77
PSMD11-207ENST00000578397 BLMP54132 1417 aaPredicted RBP19.86■□□□□ 0.77
PSMD11-207ENST00000578397 TONSLQ96HA7 1378 aa19.86■□□□□ 0.77
PSMD11-207ENST00000578397 A0A0G2JS52 829 aa19.86■□□□□ 0.77
PSMD11-207ENST00000578397 MYT1Q01538 1121 aa19.86■□□□□ 0.77
PSMD11-207ENST00000578397 USP6P35125 1406 aa19.85■□□□□ 0.77
PSMD11-207ENST00000578397 CPDO75976 1380 aa19.85■□□□□ 0.77
PSMD11-207ENST00000578397 EP400Q96L91 3159 aa19.85■□□□□ 0.77
PSMD11-207ENST00000578397 GCP02774 474 aa19.84■□□□□ 0.77
PSMD11-207ENST00000578397 ZNF692Q9BU19 519 aaPredicted RBP19.84■□□□□ 0.77
PSMD11-207ENST00000578397 CARD11Q9BXL7 1154 aa19.84■□□□□ 0.77
PSMD11-207ENST00000578397 SBNO2Q9Y2G9 1366 aa19.83■□□□□ 0.77
PSMD11-207ENST00000578397 PHRF1Q9P1Y6 1649 aaKnown RBP19.83■□□□□ 0.76
PSMD11-207ENST00000578397 SPATA31A1Q5TZJ5 1347 aa19.82■□□□□ 0.76
PSMD11-207ENST00000578397 EVA1CP58658 441 aa19.82■□□□□ 0.76
PSMD11-207ENST00000578397 NLRP6P59044 892 aa19.82■□□□□ 0.76
PSMD11-207ENST00000578397 SF3B2Q13435 895 aaKnown RBP19.82■□□□□ 0.76
PSMD11-207ENST00000578397 STRN4Q9NRL3 753 aa19.82■□□□□ 0.76
PSMD11-207ENST00000578397 SSH2Q76I76 1423 aa19.81■□□□□ 0.76
PSMD11-207ENST00000578397 ZRANB1Q9UGI0 708 aa19.8■□□□□ 0.76
PSMD11-207ENST00000578397 BRWD3Q6RI45 1802 aa19.8■□□□□ 0.76
PSMD11-207ENST00000578397 NRKQ7Z2Y5 1582 aa19.79■□□□□ 0.76
PSMD11-207ENST00000578397 BARGINQ6ZT62 677 aa19.77■□□□□ 0.76
PSMD11-207ENST00000578397 TTC21BQ7Z4L5 1316 aa19.76■□□□□ 0.75
PSMD11-207ENST00000578397 TTC21AQ8NDW8 1320 aa19.76■□□□□ 0.75
PSMD11-207ENST00000578397 CAMTA1Q9Y6Y1 1673 aa19.76■□□□□ 0.75
PSMD11-207ENST00000578397 DEFB132Q7Z7B7 95 aa19.76■□□□□ 0.75
PSMD11-207ENST00000578397 CPSF1Q10570 1443 aaKnown RBP19.76■□□□□ 0.75
PSMD11-207ENST00000578397 LARP1Q6PKG0 1096 aaKnown RBP19.75■□□□□ 0.75
PSMD11-207ENST00000578397 AATKQ6ZMQ8 1374 aa19.74■□□□□ 0.75
PSMD11-207ENST00000578397 TCP11L2Q8N4U5 519 aa19.74■□□□□ 0.75
PSMD11-207ENST00000578397 USP35Q9P2H5 1018 aa19.74■□□□□ 0.75
PSMD11-207ENST00000578397 THRAP3Q9Y2W1 955 aaKnown RBP19.74■□□□□ 0.75
PSMD11-207ENST00000578397 SLIT3O75094 1523 aa19.74■□□□□ 0.75
PSMD11-207ENST00000578397 THSD7AQ9UPZ6 1657 aa19.74■□□□□ 0.75
PSMD11-207ENST00000578397 KTN1Q86UP2 1357 aaKnown RBP19.73■□□□□ 0.75
PSMD11-207ENST00000578397 BAG6P46379 1132 aa19.73■□□□□ 0.75
PSMD11-207ENST00000578397 KCNH5Q8NCM2 988 aa19.73■□□□□ 0.75
PSMD11-207ENST00000578397 PUS7Q96PZ0 661 aaKnown RBP19.73■□□□□ 0.75
PSMD11-207ENST00000578397 LMO7Q8WWI1 1683 aa19.72■□□□□ 0.75
PSMD11-207ENST00000578397 SLC24A1O60721 1099 aa19.71■□□□□ 0.75
PSMD11-207ENST00000578397 FAM196AQ6ZSG2 479 aa19.71■□□□□ 0.75
PSMD11-207ENST00000578397 ZBTB7CA1YPR0 619 aa19.7■□□□□ 0.74
PSMD11-207ENST00000578397 FAM182BQ5T319 152 aa19.7■□□□□ 0.74
PSMD11-207ENST00000578397 COL5A2P05997 1499 aaPredicted RBP19.7■□□□□ 0.74
PSMD11-207ENST00000578397 PIK3C2AO00443 1686 aa19.69■□□□□ 0.74
PSMD11-207ENST00000578397 PDE3BQ13370 1112 aa19.69■□□□□ 0.74
PSMD11-207ENST00000578397 ARHGEF25Q86VW2 580 aa19.69■□□□□ 0.74
PSMD11-207ENST00000578397 TMC1Q8TDI8 760 aa19.69■□□□□ 0.74
PSMD11-207ENST00000578397 U3KPZ7 1027 aaPredicted RBP19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms