RNA–Protein interactions for RNA: ENST00000578294.1

NUP85-207, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-207ENST00000578294 QTRT2Q9H974 415 aaKnown RBP18.37■□□□□ 0.53
NUP85-207ENST00000578294 ATAD2Q6PL18 1390 aa18.37■□□□□ 0.53
NUP85-207ENST00000578294 CCER1Q8TC90 406 aaPredicted RBP18.36■□□□□ 0.53
NUP85-207ENST00000578294 CDK12Q9NYV4 1490 aaPredicted RBP18.36■□□□□ 0.53
NUP85-207ENST00000578294 TRPC5Q9UL62 973 aaPredicted RBP18.36■□□□□ 0.53
NUP85-207ENST00000578294 RBM6P78332 1123 aaKnown RBP18.35■□□□□ 0.53
NUP85-207ENST00000578294 CABP1Q9NZU7 370 aa18.34■□□□□ 0.53
NUP85-207ENST00000578294 ABCA3Q99758 1704 aa18.33■□□□□ 0.52
NUP85-207ENST00000578294 CABLES1Q8TDN4 633 aa18.33■□□□□ 0.52
NUP85-207ENST00000578294 PUS7Q96PZ0 661 aaKnown RBP18.32■□□□□ 0.52
NUP85-207ENST00000578294 ZNF692Q9BU19 519 aaPredicted RBP18.32■□□□□ 0.52
NUP85-207ENST00000578294 SLIT2O94813 1529 aa18.32■□□□□ 0.52
NUP85-207ENST00000578294 BCL9LQ86UU0 1499 aa18.31■□□□□ 0.52
NUP85-207ENST00000578294 ATRNO75882 1429 aa18.31■□□□□ 0.52
NUP85-207ENST00000578294 UNC5CLQ8IV45 518 aa18.3■□□□□ 0.52
NUP85-207ENST00000578294 USP6P35125 1406 aa18.3■□□□□ 0.52
NUP85-207ENST00000578294 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.29■□□□□ 0.52
NUP85-207ENST00000578294 ABTB2Q8N961 1025 aa18.29■□□□□ 0.52
NUP85-207ENST00000578294 ST20-MTHFSA0A0A6YYL1 179 aa18.28■□□□□ 0.52
NUP85-207ENST00000578294 PLEKHG5O94827 1062 aa18.28■□□□□ 0.52
NUP85-207ENST00000578294 NWD2Q9ULI1 1742 aa18.28■□□□□ 0.52
NUP85-207ENST00000578294 CRYBG1Q9Y4K1 1723 aa18.27■□□□□ 0.52
NUP85-207ENST00000578294 NLRP13Q86W25 1043 aa18.27■□□□□ 0.52
NUP85-207ENST00000578294 USP47Q96K76 1375 aa18.27■□□□□ 0.51
NUP85-207ENST00000578294 COL14A1Q05707 1796 aaKnown RBP18.25■□□□□ 0.51
NUP85-207ENST00000578294 FAM83GA6ND36 823 aa18.25■□□□□ 0.51
NUP85-207ENST00000578294 GJD4Q96KN9 370 aaPredicted RBP18.25■□□□□ 0.51
NUP85-207ENST00000578294 TESK2Q96S53 571 aa18.25■□□□□ 0.51
NUP85-207ENST00000578294 NINLQ9Y2I6 1382 aa18.25■□□□□ 0.51
NUP85-207ENST00000578294 PLCH1Q4KWH8 1693 aa18.25■□□□□ 0.51
NUP85-207ENST00000578294 TTC21AQ8NDW8 1320 aa18.24■□□□□ 0.51
NUP85-207ENST00000578294 CPSF1Q10570 1443 aaKnown RBP18.24■□□□□ 0.51
NUP85-207ENST00000578294 SSH2Q76I76 1423 aa18.24■□□□□ 0.51
NUP85-207ENST00000578294 PHRF1Q9P1Y6 1649 aaKnown RBP18.24■□□□□ 0.51
NUP85-207ENST00000578294 PRDM11Q9NQV5 511 aa18.24■□□□□ 0.51
NUP85-207ENST00000578294 USP19O94966 1318 aa18.23■□□□□ 0.51
NUP85-207ENST00000578294 RGS12O14924 1447 aa18.23■□□□□ 0.51
NUP85-207ENST00000578294 KTN1Q86UP2 1357 aaKnown RBP18.23■□□□□ 0.51
NUP85-207ENST00000578294 VPS72Q15906 364 aa18.23■□□□□ 0.51
NUP85-207ENST00000578294 NUTM2GQ5VZR2 741 aa18.23■□□□□ 0.51
NUP85-207ENST00000578294 AKAP12Q02952 1782 aa18.22■□□□□ 0.51
NUP85-207ENST00000578294 TMF1P82094 1093 aa18.22■□□□□ 0.51
NUP85-207ENST00000578294 CDCA8Q53HL2 280 aa18.22■□□□□ 0.51
NUP85-207ENST00000578294 HDGFL2Q7Z4V5 671 aaPredicted RBP18.22■□□□□ 0.51
NUP85-207ENST00000578294 TMC1Q8TDI8 760 aa18.22■□□□□ 0.51
NUP85-207ENST00000578294 TTC21BQ7Z4L5 1316 aa18.22■□□□□ 0.51
NUP85-207ENST00000578294 KIAA0232Q92628 1395 aa18.21■□□□□ 0.51
NUP85-207ENST00000578294 NLRP6P59044 892 aa18.21■□□□□ 0.51
NUP85-207ENST00000578294 BTG4Q9NY30 223 aa18.21■□□□□ 0.51
NUP85-207ENST00000578294 TERF2IPQ9NYB0 399 aa18.21■□□□□ 0.51
NUP85-207ENST00000578294 CPDO75976 1380 aa18.2■□□□□ 0.5
NUP85-207ENST00000578294 NRKQ7Z2Y5 1582 aa18.2■□□□□ 0.5
NUP85-207ENST00000578294 GCP02774 474 aa18.19■□□□□ 0.5
NUP85-207ENST00000578294 ZC3H6P61129 1189 aaKnown RBP18.18■□□□□ 0.5
NUP85-207ENST00000578294 CCDC9Q9Y3X0 531 aaKnown RBP18.18■□□□□ 0.5
NUP85-207ENST00000578294 SLIT3O75094 1523 aa18.18■□□□□ 0.5
NUP85-207ENST00000578294 MON2Q7Z3U7 1717 aa18.18■□□□□ 0.5
NUP85-207ENST00000578294 NRAPQ86VF7 1730 aa18.18■□□□□ 0.5
NUP85-207ENST00000578294 KCNH5Q8NCM2 988 aa18.17■□□□□ 0.5
NUP85-207ENST00000578294 SLC12A5Q9H2X9 1139 aa18.17■□□□□ 0.5
NUP85-207ENST00000578294 CD163L1Q9NR16 1453 aa18.17■□□□□ 0.5
NUP85-207ENST00000578294 PIK3C2AO00443 1686 aa18.17■□□□□ 0.5
NUP85-207ENST00000578294 GLI3P10071 1580 aa18.17■□□□□ 0.5
NUP85-207ENST00000578294 EDC4Q6P2E9 1401 aaKnown RBP18.15■□□□□ 0.5
NUP85-207ENST00000578294 ONECUT3O60422 494 aaPredicted RBP18.14■□□□□ 0.49
NUP85-207ENST00000578294 CHRNA2Q15822 529 aa18.14■□□□□ 0.49
NUP85-207ENST00000578294 A0A1W2PP64 1363 aa18.14■□□□□ 0.49
NUP85-207ENST00000578294 USP31Q70CQ4 1352 aa18.13■□□□□ 0.49
NUP85-207ENST00000578294 EVA1CP58658 441 aa18.12■□□□□ 0.49
NUP85-207ENST00000578294 EIF4G2P78344 907 aaKnown RBP eCLIP18.12■□□□□ 0.49
NUP85-207ENST00000578294 UPF1Q92900 1129 aaKnown RBP eCLIP18.12■□□□□ 0.49
NUP85-207ENST00000578294 SPATA31A5Q5VU36 1347 aa18.12■□□□□ 0.49
NUP85-207ENST00000578294 SPATA31A7Q8IWB4 1347 aa18.12■□□□□ 0.49
NUP85-207ENST00000578294 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.11■□□□□ 0.49
NUP85-207ENST00000578294 AATKQ6ZMQ8 1374 aa18.11■□□□□ 0.49
NUP85-207ENST00000578294 ANKRD36BQ8N2N9 1353 aa18.11■□□□□ 0.49
NUP85-207ENST00000578294 USP54Q70EL1 1684 aa18.1■□□□□ 0.49
NUP85-207ENST00000578294 LMO7Q8WWI1 1683 aa18.1■□□□□ 0.49
NUP85-207ENST00000578294 SEPT12Q8IYM1 358 aa18.1■□□□□ 0.49
NUP85-207ENST00000578294 STRN4Q9NRL3 753 aa18.09■□□□□ 0.49
NUP85-207ENST00000578294 SPATA31A1Q5TZJ5 1347 aa18.08■□□□□ 0.49
NUP85-207ENST00000578294 CAMTA1Q9Y6Y1 1673 aa18.08■□□□□ 0.48
NUP85-207ENST00000578294 FAM98CQ17RN3 349 aaKnown RBP18.07■□□□□ 0.48
NUP85-207ENST00000578294 ARHGEF25Q86VW2 580 aa18.07■□□□□ 0.48
NUP85-207ENST00000578294 NME9Q86XW9 330 aa18.07■□□□□ 0.48
NUP85-207ENST00000578294 ABCC6O95255 1503 aa18.07■□□□□ 0.48
NUP85-207ENST00000578294 A0A0G2JS52 829 aa18.06■□□□□ 0.48
NUP85-207ENST00000578294 ZBTB7CA1YPR0 619 aa18.06■□□□□ 0.48
NUP85-207ENST00000578294 MYT1Q01538 1121 aa18.06■□□□□ 0.48
NUP85-207ENST00000578294 CCDC125Q86Z20 511 aa18.06■□□□□ 0.48
NUP85-207ENST00000578294 THRAP3Q9Y2W1 955 aaKnown RBP18.06■□□□□ 0.48
NUP85-207ENST00000578294 NFAT5O94916 1531 aa18.06■□□□□ 0.48
NUP85-207ENST00000578294 COL5A2P05997 1499 aaPredicted RBP18.06■□□□□ 0.48
NUP85-207ENST00000578294 BARGINQ6ZT62 677 aa18.04■□□□□ 0.48
NUP85-207ENST00000578294 KRT27Q7Z3Y8 459 aa18.04■□□□□ 0.48
NUP85-207ENST00000578294 OVOS2A0A0J9YW53 1432 aa18.04■□□□□ 0.48
NUP85-207ENST00000578294 OVOS2Q6IE36 1432 aa18.04■□□□□ 0.48
NUP85-207ENST00000578294 SOX12O15370 315 aa18.03■□□□□ 0.48
NUP85-207ENST00000578294 HSPA5P11021 654 aaKnown RBP18.03■□□□□ 0.48
NUP85-207ENST00000578294 LARP1Q6PKG0 1096 aaKnown RBP18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms