RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 SPATA31A5Q5VU36 1347 aa16.44■□□□□ 0.22
SMARCE1-214ENST00000578112 SPATA31A7Q8IWB4 1347 aa16.44■□□□□ 0.22
SMARCE1-214ENST00000578112 TRAK1Q9UPV9 953 aa16.44■□□□□ 0.22
SMARCE1-214ENST00000578112 PMFBP1Q8TBY8 1022 aa16.43■□□□□ 0.22
SMARCE1-214ENST00000578112 CABLES1Q8TDN4 633 aa16.43■□□□□ 0.22
SMARCE1-214ENST00000578112 CCDC9Q9Y3X0 531 aaKnown RBP16.43■□□□□ 0.22
SMARCE1-214ENST00000578112 LMOD2Q6P5Q4 547 aa16.43■□□□□ 0.22
SMARCE1-214ENST00000578112 PARD3Q8TEW0 1356 aa16.43■□□□□ 0.22
SMARCE1-214ENST00000578112 NGDNQ8NEJ9 315 aaKnown RBP16.42■□□□□ 0.22
SMARCE1-214ENST00000578112 DCAF11Q8TEB1 546 aa16.42■□□□□ 0.22
SMARCE1-214ENST00000578112 TNS1Q9HBL0 1735 aaKnown RBP16.42■□□□□ 0.22
SMARCE1-214ENST00000578112 SAFB2Q14151 953 aaKnown RBP eCLIP16.42■□□□□ 0.22
SMARCE1-214ENST00000578112 BTG4Q9NY30 223 aa16.42■□□□□ 0.22
SMARCE1-214ENST00000578112 MINK1Q8N4C8 1332 aaPredicted RBP16.41■□□□□ 0.22
SMARCE1-214ENST00000578112 C11orf95C9JLR9 678 aaPredicted RBP16.41■□□□□ 0.22
SMARCE1-214ENST00000578112 PLEKHG3A1L390 1219 aa16.4■□□□□ 0.22
SMARCE1-214ENST00000578112 CPDO75976 1380 aa16.39■□□□□ 0.21
SMARCE1-214ENST00000578112 NUDT16Q96DE0 195 aaKnown RBP16.39■□□□□ 0.21
SMARCE1-214ENST00000578112 NRKQ7Z2Y5 1582 aa16.39■□□□□ 0.21
SMARCE1-214ENST00000578112 PRDM11Q9NQV5 511 aa16.37■□□□□ 0.21
SMARCE1-214ENST00000578112 SPATA31A1Q5TZJ5 1347 aa16.37■□□□□ 0.21
SMARCE1-214ENST00000578112 LMO7Q8WWI1 1683 aa16.37■□□□□ 0.21
SMARCE1-214ENST00000578112 BARGINQ6ZT62 677 aa16.37■□□□□ 0.21
SMARCE1-214ENST00000578112 CCDC61Q9Y6R9 512 aa16.37■□□□□ 0.21
SMARCE1-214ENST00000578112 FAM98CQ17RN3 349 aaKnown RBP16.36■□□□□ 0.21
SMARCE1-214ENST00000578112 DEFB132Q7Z7B7 95 aa16.36■□□□□ 0.21
SMARCE1-214ENST00000578112 HIRIP3Q9BW71 556 aaPredicted RBP16.36■□□□□ 0.21
SMARCE1-214ENST00000578112 USP19O94966 1318 aa16.36■□□□□ 0.21
SMARCE1-214ENST00000578112 KDM2AQ9Y2K7 1162 aa16.35■□□□□ 0.21
SMARCE1-214ENST00000578112 FAM196AQ6ZSG2 479 aa16.35■□□□□ 0.21
SMARCE1-214ENST00000578112 THRAP3Q9Y2W1 955 aaKnown RBP16.35■□□□□ 0.21
SMARCE1-214ENST00000578112 RREB1Q92766 1687 aa16.34■□□□□ 0.21
SMARCE1-214ENST00000578112 CDK19Q9BWU1 502 aa16.34■□□□□ 0.21
SMARCE1-214ENST00000578112 KIAA0232Q92628 1395 aa16.34■□□□□ 0.21
SMARCE1-214ENST00000578112 SSH2Q76I76 1423 aa16.34■□□□□ 0.21
SMARCE1-214ENST00000578112 PARP4Q9UKK3 1724 aaKnown RBP16.34■□□□□ 0.21
SMARCE1-214ENST00000578112 RGPD3A6NKT7 1758 aaPredicted RBP16.33■□□□□ 0.21
SMARCE1-214ENST00000578112 RGPD4Q7Z3J3 1758 aa16.33■□□□□ 0.21
SMARCE1-214ENST00000578112 A0A0G2JS52 829 aa16.33■□□□□ 0.2
SMARCE1-214ENST00000578112 PAK3O75914 559 aaPredicted RBP16.33■□□□□ 0.2
SMARCE1-214ENST00000578112 MYT1Q01538 1121 aa16.33■□□□□ 0.2
SMARCE1-214ENST00000578112 NBPF8Q3BBV2 869 aa16.31■□□□□ 0.2
SMARCE1-214ENST00000578112 SLIT3O75094 1523 aa16.31■□□□□ 0.2
SMARCE1-214ENST00000578112 ACEP12821 1306 aa16.31■□□□□ 0.2
SMARCE1-214ENST00000578112 QRICH2Q9H0J4 1663 aa16.3■□□□□ 0.2
SMARCE1-214ENST00000578112 NLRP13Q86W25 1043 aa16.29■□□□□ 0.2
SMARCE1-214ENST00000578112 ABCC6O95255 1503 aa16.29■□□□□ 0.2
SMARCE1-214ENST00000578112 PPIP5K1Q6PFW1 1433 aa16.28■□□□□ 0.2
SMARCE1-214ENST00000578112 CENPJQ9HC77 1338 aaPredicted RBP16.28■□□□□ 0.2
SMARCE1-214ENST00000578112 CAMTA1Q9Y6Y1 1673 aa16.28■□□□□ 0.2
SMARCE1-214ENST00000578112 TRPM1Q7Z4N2 1603 aa16.28■□□□□ 0.2
SMARCE1-214ENST00000578112 TCP11L2Q8N4U5 519 aa16.27■□□□□ 0.19
SMARCE1-214ENST00000578112 CAMKK2Q96RR4 588 aa16.27■□□□□ 0.19
SMARCE1-214ENST00000578112 NUP188Q5SRE5 1749 aa16.26■□□□□ 0.19
SMARCE1-214ENST00000578112 COL5A2P05997 1499 aaPredicted RBP16.26■□□□□ 0.19
SMARCE1-214ENST00000578112 EVA1CP58658 441 aa16.26■□□□□ 0.19
SMARCE1-214ENST00000578112 WNK3Q9BYP7 1800 aa16.25■□□□□ 0.19
SMARCE1-214ENST00000578112 AATKQ6ZMQ8 1374 aa16.25■□□□□ 0.19
SMARCE1-214ENST00000578112 EN1Q05925 392 aaPredicted RBP16.25■□□□□ 0.19
SMARCE1-214ENST00000578112 ABTB2Q8N961 1025 aa16.25■□□□□ 0.19
SMARCE1-214ENST00000578112 USP6P35125 1406 aa16.25■□□□□ 0.19
SMARCE1-214ENST00000578112 BCL9O00512 1426 aa16.24■□□□□ 0.19
SMARCE1-214ENST00000578112 CRB1P82279 1406 aa16.24■□□□□ 0.19
SMARCE1-214ENST00000578112 PEAK1Q9H792 1746 aa16.24■□□□□ 0.19
SMARCE1-214ENST00000578112 PLEKHG5O94827 1062 aa16.24■□□□□ 0.19
SMARCE1-214ENST00000578112 PDE3BQ13370 1112 aa16.24■□□□□ 0.19
SMARCE1-214ENST00000578112 CDCA7Q9BWT1 371 aaPredicted RBP16.23■□□□□ 0.19
SMARCE1-214ENST00000578112 AKAP12Q02952 1782 aa16.23■□□□□ 0.19
SMARCE1-214ENST00000578112 STRN4Q9NRL3 753 aa16.22■□□□□ 0.19
SMARCE1-214ENST00000578112 USP54Q70EL1 1684 aa16.22■□□□□ 0.19
SMARCE1-214ENST00000578112 COL18A1P39060 1754 aa16.22■□□□□ 0.19
SMARCE1-214ENST00000578112 ZC3H6P61129 1189 aaKnown RBP16.22■□□□□ 0.19
SMARCE1-214ENST00000578112 GCP02774 474 aa16.21■□□□□ 0.19
SMARCE1-214ENST00000578112 SRPK2P78362 688 aaKnown RBP16.21■□□□□ 0.19
SMARCE1-214ENST00000578112 CHRNA2Q15822 529 aa16.21■□□□□ 0.19
SMARCE1-214ENST00000578112 NBPF14Q5TI25 921 aa16.21■□□□□ 0.19
SMARCE1-214ENST00000578112 OVOS2A0A0G2JMS6 1433 aa16.21■□□□□ 0.19
SMARCE1-214ENST00000578112 OVOS2A0A0J9YW53 1432 aa16.21■□□□□ 0.19
SMARCE1-214ENST00000578112 OVOS2Q6IE36 1432 aa16.21■□□□□ 0.19
SMARCE1-214ENST00000578112 EVC2Q86UK5 1308 aa16.21■□□□□ 0.18
SMARCE1-214ENST00000578112 LRRC37A3O60309 1634 aa16.2■□□□□ 0.18
SMARCE1-214ENST00000578112 ZNF692Q9BU19 519 aaPredicted RBP16.2■□□□□ 0.18
SMARCE1-214ENST00000578112 PIK3C2AO00443 1686 aa16.2■□□□□ 0.18
SMARCE1-214ENST00000578112 EZH2Q15910 746 aaKnown RBP16.2■□□□□ 0.18
SMARCE1-214ENST00000578112 TTC21AQ8NDW8 1320 aa16.19■□□□□ 0.18
SMARCE1-214ENST00000578112 APBA3O96018 575 aa16.19■□□□□ 0.18
SMARCE1-214ENST00000578112 PSDA5PKW4 1024 aaPredicted RBP16.19■□□□□ 0.18
SMARCE1-214ENST00000578112 TRIM37O94972 964 aa16.19■□□□□ 0.18
SMARCE1-214ENST00000578112 LARP1Q6PKG0 1096 aaKnown RBP16.18■□□□□ 0.18
SMARCE1-214ENST00000578112 KCNH5Q8NCM2 988 aa16.18■□□□□ 0.18
SMARCE1-214ENST00000578112 SBNO2Q9Y2G9 1366 aa16.18■□□□□ 0.18
SMARCE1-214ENST00000578112 R3HDM1Q15032 1099 aaKnown RBP16.18■□□□□ 0.18
SMARCE1-214ENST00000578112 NBPF1Q3BBV0 1214 aa16.18■□□□□ 0.18
SMARCE1-214ENST00000578112 SBF2Q86WG5 1849 aa16.17■□□□□ 0.18
SMARCE1-214ENST00000578112 CPSF1Q10570 1443 aaKnown RBP16.16■□□□□ 0.18
SMARCE1-214ENST00000578112 PLSCR1O15162 318 aa16.16■□□□□ 0.18
SMARCE1-214ENST00000578112 MON2Q7Z3U7 1717 aa16.15■□□□□ 0.18
SMARCE1-214ENST00000578112 NUTM2GQ5VZR2 741 aa16.15■□□□□ 0.18
SMARCE1-214ENST00000578112 NINLQ9Y2I6 1382 aa16.14■□□□□ 0.17
SMARCE1-214ENST00000578112 WDR17Q8IZU2 1322 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms