RNA–Protein interactions for RNA: ENST00000578009.5

IFT20-205, Transcript of intraflagellar transport 20, humanhuman

TSL 3

Gene IFT20, Length 611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-205ENST00000578009 ZNF511Q8NB15 262 aa8.86□□□□□ -0.99
IFT20-205ENST00000578009 VARSP26640 1264 aaKnown RBP8.85□□□□□ -0.99
IFT20-205ENST00000578009 MTMR2Q13614 643 aa8.85□□□□□ -0.99
IFT20-205ENST00000578009 ERBB4Q15303 1308 aa8.84□□□□□ -0.99
IFT20-205ENST00000578009 CTHP32929 405 aa8.84□□□□□ -0.99
IFT20-205ENST00000578009 SCARF1Q14162 830 aa8.84□□□□□ -0.99
IFT20-205ENST00000578009 MRPL14Q6P1L8 145 aaKnown RBP8.83□□□□□ -1
IFT20-205ENST00000578009 PURBQ96QR8 312 aaKnown RBP8.83□□□□□ -1
IFT20-205ENST00000578009 SPDYE5A6NIY4 337 aa8.82□□□□□ -1
IFT20-205ENST00000578009 LORP23490 312 aaPredicted RBP8.82□□□□□ -1
IFT20-205ENST00000578009 WDR4P57081 412 aaKnown RBP8.82□□□□□ -1
IFT20-205ENST00000578009 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.82□□□□□ -1
IFT20-205ENST00000578009 TIMP2P16035 220 aa8.81□□□□□ -1
IFT20-205ENST00000578009 DESI1Q6ICB0 168 aa8.81□□□□□ -1
IFT20-205ENST00000578009 VSIG10Q8N0Z9 540 aa8.81□□□□□ -1
IFT20-205ENST00000578009 SOBPA7XYQ1 873 aa8.8□□□□□ -1
IFT20-205ENST00000578009 ADH1CP00326 375 aa8.8□□□□□ -1
IFT20-205ENST00000578009 ARID5BQ14865 1188 aa8.8□□□□□ -1
IFT20-205ENST00000578009 MPNDQ8N594 471 aa8.8□□□□□ -1
IFT20-205ENST00000578009 FAM174AQ8TBP5 190 aa8.8□□□□□ -1
IFT20-205ENST00000578009 GIGYF2Q6Y7W6 1299 aaKnown RBP8.79□□□□□ -1
IFT20-205ENST00000578009 BEGAINQ9BUH8 593 aa8.79□□□□□ -1
IFT20-205ENST00000578009 DCAF1Q9Y4B6 1507 aa8.79□□□□□ -1
IFT20-205ENST00000578009 LYPD8Q6UX82 237 aa8.77□□□□□ -1.01
IFT20-205ENST00000578009 FOXJ1Q92949 421 aa8.77□□□□□ -1.01
IFT20-205ENST00000578009 TBC1D2Q9BYX2 928 aa8.77□□□□□ -1.01
IFT20-205ENST00000578009 AGERQ15109 404 aa8.76□□□□□ -1.01
IFT20-205ENST00000578009 AMHR2Q16671 573 aa8.76□□□□□ -1.01
IFT20-205ENST00000578009 BARGINQ6ZT62 677 aa8.76□□□□□ -1.01
IFT20-205ENST00000578009 MAP10Q9P2G4 905 aa8.76□□□□□ -1.01
IFT20-205ENST00000578009 PCDHB15Q9Y5E8 787 aa8.76□□□□□ -1.01
IFT20-205ENST00000578009 CFAP99D6REC4 459 aa8.75□□□□□ -1.01
IFT20-205ENST00000578009 ZIC2O95409 532 aaPredicted RBP8.75□□□□□ -1.01
IFT20-205ENST00000578009 C6orf118Q5T5N4 469 aa8.75□□□□□ -1.01
IFT20-205ENST00000578009 RSBN1LQ6PCB5 846 aaPredicted RBP8.75□□□□□ -1.01
IFT20-205ENST00000578009 KLF16Q9BXK1 252 aaPredicted RBP8.75□□□□□ -1.01
IFT20-205ENST00000578009 ZFAND3Q9H8U3 227 aa8.75□□□□□ -1.01
IFT20-205ENST00000578009 MAN1A2O60476 641 aa8.74□□□□□ -1.01
IFT20-205ENST00000578009 CDK15Q96Q40 435 aa8.74□□□□□ -1.01
IFT20-205ENST00000578009 ZMYND10O75800 440 aa8.73□□□□□ -1.01
IFT20-205ENST00000578009 HRCP23327 699 aa8.73□□□□□ -1.01
IFT20-205ENST00000578009 GJA5P36382 358 aa8.73□□□□□ -1.01
IFT20-205ENST00000578009 DIXDC1Q155Q3 683 aa8.73□□□□□ -1.01
IFT20-205ENST00000578009 ITPKCQ96DU7 683 aa8.73□□□□□ -1.01
IFT20-205ENST00000578009 ZBTB3Q9H5J0 574 aa8.73□□□□□ -1.01
IFT20-205ENST00000578009 CSPP1Q1MSJ5 1256 aa8.72□□□□□ -1.01
IFT20-205ENST00000578009 SPTLC1O15269 473 aa8.71□□□□□ -1.02
IFT20-205ENST00000578009 F12P00748 615 aaPredicted RBP8.71□□□□□ -1.02
IFT20-205ENST00000578009 NR3C2P08235 984 aa8.71□□□□□ -1.02
IFT20-205ENST00000578009 BMP2P12643 396 aa8.71□□□□□ -1.02
IFT20-205ENST00000578009 NR5A1Q13285 461 aa8.71□□□□□ -1.02
IFT20-205ENST00000578009 CABLES1Q8TDN4 633 aa8.71□□□□□ -1.02
IFT20-205ENST00000578009 TSC1Q92574 1164 aa8.71□□□□□ -1.02
IFT20-205ENST00000578009 UPP2O95045 317 aa8.7□□□□□ -1.02
IFT20-205ENST00000578009 VSIG8P0DPA2 414 aa8.7□□□□□ -1.02
IFT20-205ENST00000578009 GRM5P41594 1212 aa8.69□□□□□ -1.02
IFT20-205ENST00000578009 C4orf48Q5BLP8 95 aa8.69□□□□□ -1.02
IFT20-205ENST00000578009 RIC3Q7Z5B4 369 aa8.69□□□□□ -1.02
IFT20-205ENST00000578009 BPHLQ86WA6 291 aaPredicted RBP8.69□□□□□ -1.02
IFT20-205ENST00000578009 PARP9Q8IXQ6 854 aa8.69□□□□□ -1.02
IFT20-205ENST00000578009 ZC3H15Q8WU90 426 aaKnown RBP8.69□□□□□ -1.02
IFT20-205ENST00000578009 PER1O15534 1290 aaPredicted RBP8.68□□□□□ -1.02
IFT20-205ENST00000578009 PPFIA3O75145 1194 aa8.67□□□□□ -1.02
IFT20-205ENST00000578009 PRPF38BQ5VTL8 546 aaKnown RBP8.67□□□□□ -1.02
IFT20-205ENST00000578009 LINC00528Q8N1L1 170 aa8.67□□□□□ -1.02
IFT20-205ENST00000578009 MYO15BQ96JP2 1530 aa8.67□□□□□ -1.02
IFT20-205ENST00000578009 NUTM2BA6NNL0 878 aaPredicted RBP8.66□□□□□ -1.02
IFT20-205ENST00000578009 NUTM2EB1AL46 878 aaPredicted RBP8.66□□□□□ -1.02
IFT20-205ENST00000578009 NUTM2DQ5VT03 806 aaPredicted RBP8.66□□□□□ -1.02
IFT20-205ENST00000578009 NUTM2AQ8IVF1 878 aaPredicted RBP8.66□□□□□ -1.02
IFT20-205ENST00000578009 FSHRP23945 695 aa8.65□□□□□ -1.02
IFT20-205ENST00000578009 MEIOBQ8N635 442 aa8.65□□□□□ -1.02
IFT20-205ENST00000578009 TRIM66O15016 1216 aa8.64□□□□□ -1.03
IFT20-205ENST00000578009 VASH1Q7L8A9 365 aaPredicted RBP8.64□□□□□ -1.03
IFT20-205ENST00000578009 ARMC2Q8NEN0 867 aa8.64□□□□□ -1.03
IFT20-205ENST00000578009 DNMT3LQ9UJW3 386 aa8.63□□□□□ -1.03
IFT20-205ENST00000578009 SOS2Q07890 1332 aaPredicted RBP8.62□□□□□ -1.03
IFT20-205ENST00000578009 MAGEB6P1A0A0J9YX57 407 aa8.62□□□□□ -1.03
IFT20-205ENST00000578009 QPCTQ16769 361 aa8.62□□□□□ -1.03
IFT20-205ENST00000578009 LIMD1Q9UGP4 676 aa8.62□□□□□ -1.03
IFT20-205ENST00000578009 NBPF14Q5TI25 921 aa8.61□□□□□ -1.03
IFT20-205ENST00000578009 TSEN34Q9BSV6 310 aaKnown RBP8.61□□□□□ -1.03
IFT20-205ENST00000578009 C1QTNF2Q9BXJ5 285 aa8.61□□□□□ -1.03
IFT20-205ENST00000578009 CARD14Q9BXL6 1004 aa8.6□□□□□ -1.03
IFT20-205ENST00000578009 EMILIN1Q9Y6C2 1016 aa8.6□□□□□ -1.03
IFT20-205ENST00000578009 TTLL8A6PVC2 850 aa8.59□□□□□ -1.03
IFT20-205ENST00000578009 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.59□□□□□ -1.03
IFT20-205ENST00000578009 MYSM1Q5VVJ2 828 aa8.59□□□□□ -1.03
IFT20-205ENST00000578009 SH3RF1Q7Z6J0 888 aa8.59□□□□□ -1.03
IFT20-205ENST00000578009 CCDC116Q8IYX3 515 aa8.59□□□□□ -1.03
IFT20-205ENST00000578009 HELBQ8NG08 1087 aaPredicted RBP8.59□□□□□ -1.03
IFT20-205ENST00000578009 AK7Q96M32 723 aa8.59□□□□□ -1.03
IFT20-205ENST00000578009 MAP4K5Q9Y4K4 846 aa8.59□□□□□ -1.03
IFT20-205ENST00000578009 FIGNL2A6NMB9 653 aa8.58□□□□□ -1.04
IFT20-205ENST00000578009 KCNMA1Q12791 1236 aa8.58□□□□□ -1.04
IFT20-205ENST00000578009 SH3BP5LQ7L8J4 393 aa8.58□□□□□ -1.04
IFT20-205ENST00000578009 KCTD17Q8N5Z5 321 aa8.58□□□□□ -1.04
IFT20-205ENST00000578009 GPR161Q8N6U8 529 aaKnown RBP8.58□□□□□ -1.04
IFT20-205ENST00000578009 CNTNAP3BQ96NU0 1288 aa8.58□□□□□ -1.04
IFT20-205ENST00000578009 CNTNAP3Q9BZ76 1288 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms