RNA–Protein interactions for RNA: ENST00000577990.1

SMARCD2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-206ENST00000577990 USP47Q96K76 1375 aa31.31■■■□□ 2.6
SMARCD2-206ENST00000577990 PLEKHG5O94827 1062 aa31.31■■■□□ 2.6
SMARCD2-206ENST00000577990 ST20-MTHFSA0A0A6YYL1 179 aa31.3■■■□□ 2.6
SMARCD2-206ENST00000577990 LMOD2Q6P5Q4 547 aa31.29■■■□□ 2.6
SMARCD2-206ENST00000577990 ALS2Q96Q42 1657 aa31.29■■■□□ 2.6
SMARCD2-206ENST00000577990 ATAD2Q6PL18 1390 aa31.28■■■□□ 2.6
SMARCD2-206ENST00000577990 ATRNO75882 1429 aa31.27■■■□□ 2.6
SMARCD2-206ENST00000577990 CABP1Q9NZU7 370 aa31.27■■■□□ 2.6
SMARCD2-206ENST00000577990 BCL9LQ86UU0 1499 aa31.27■■■□□ 2.6
SMARCD2-206ENST00000577990 CABLES1Q8TDN4 633 aa31.26■■■□□ 2.59
SMARCD2-206ENST00000577990 UPF1Q92900 1129 aaKnown RBP eCLIP31.26■■■□□ 2.59
SMARCD2-206ENST00000577990 TESK2Q96S53 571 aa31.26■■■□□ 2.59
SMARCD2-206ENST00000577990 TRPC5Q9UL62 973 aaPredicted RBP31.26■■■□□ 2.59
SMARCD2-206ENST00000577990 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.25■■■□□ 2.59
SMARCD2-206ENST00000577990 PAK3O75914 559 aaPredicted RBP31.24■■■□□ 2.59
SMARCD2-206ENST00000577990 HAP1P54257 671 aaPredicted RBP31.22■■■□□ 2.59
SMARCD2-206ENST00000577990 SLC24A1O60721 1099 aa31.21■■■□□ 2.59
SMARCD2-206ENST00000577990 PLCH1Q4KWH8 1693 aa31.21■■■□□ 2.59
SMARCD2-206ENST00000577990 SLIT2O94813 1529 aa31.19■■■□□ 2.58
SMARCD2-206ENST00000577990 PUS7Q96PZ0 661 aaKnown RBP31.17■■■□□ 2.58
SMARCD2-206ENST00000577990 BRD4O60885 1362 aaPredicted RBP31.17■■■□□ 2.58
SMARCD2-206ENST00000577990 USP6P35125 1406 aa31.16■■■□□ 2.58
SMARCD2-206ENST00000577990 AKAP12Q02952 1782 aa31.15■■■□□ 2.58
SMARCD2-206ENST00000577990 NWD2Q9ULI1 1742 aa31.13■■■□□ 2.57
SMARCD2-206ENST00000577990 CRYBG1Q9Y4K1 1723 aa31.13■■■□□ 2.57
SMARCD2-206ENST00000577990 GLI3P10071 1580 aa31.13■■■□□ 2.57
SMARCD2-206ENST00000577990 TMF1P82094 1093 aa31.12■■■□□ 2.57
SMARCD2-206ENST00000577990 UNC5CLQ8IV45 518 aa31.12■■■□□ 2.57
SMARCD2-206ENST00000577990 ZNF692Q9BU19 519 aaPredicted RBP31.12■■■□□ 2.57
SMARCD2-206ENST00000577990 EP400Q96L91 3159 aa31.12■■■□□ 2.57
SMARCD2-206ENST00000577990 CPSF1Q10570 1443 aaKnown RBP31.11■■■□□ 2.57
SMARCD2-206ENST00000577990 TMC1Q8TDI8 760 aa31.1■■■□□ 2.57
SMARCD2-206ENST00000577990 GJD4Q96KN9 370 aaPredicted RBP31.1■■■□□ 2.57
SMARCD2-206ENST00000577990 SSH2Q76I76 1423 aa31.09■■■□□ 2.57
SMARCD2-206ENST00000577990 ABTB2Q8N961 1025 aa31.09■■■□□ 2.57
SMARCD2-206ENST00000577990 NUTM2GQ5VZR2 741 aa31.08■■■□□ 2.57
SMARCD2-206ENST00000577990 MON2Q7Z3U7 1717 aa31.07■■■□□ 2.56
SMARCD2-206ENST00000577990 KTN1Q86UP2 1357 aaKnown RBP31.06■■■□□ 2.56
SMARCD2-206ENST00000577990 PHRF1Q9P1Y6 1649 aaKnown RBP31.06■■■□□ 2.56
SMARCD2-206ENST00000577990 SLC12A5Q9H2X9 1139 aa31.06■■■□□ 2.56
SMARCD2-206ENST00000577990 CD163L1Q9NR16 1453 aa31.06■■■□□ 2.56
SMARCD2-206ENST00000577990 NINLQ9Y2I6 1382 aa31.05■■■□□ 2.56
SMARCD2-206ENST00000577990 BRWD3Q6RI45 1802 aa31.05■■■□□ 2.56
SMARCD2-206ENST00000577990 NRKQ7Z2Y5 1582 aa31.05■■■□□ 2.56
SMARCD2-206ENST00000577990 NRAPQ86VF7 1730 aa31.05■■■□□ 2.56
SMARCD2-206ENST00000577990 EIF4G2P78344 907 aaKnown RBP eCLIP31.04■■■□□ 2.56
SMARCD2-206ENST00000577990 TTC21BQ7Z4L5 1316 aa31.03■■■□□ 2.56
SMARCD2-206ENST00000577990 FAM83GA6ND36 823 aa31.03■■■□□ 2.56
SMARCD2-206ENST00000577990 CDCA8Q53HL2 280 aa31.03■■■□□ 2.56
SMARCD2-206ENST00000577990 HDGFL2Q7Z4V5 671 aaPredicted RBP31.03■■■□□ 2.56
SMARCD2-206ENST00000577990 COL14A1Q05707 1796 aaKnown RBP31.02■■■□□ 2.56
SMARCD2-206ENST00000577990 PIK3C2AO00443 1686 aa31.02■■■□□ 2.56
SMARCD2-206ENST00000577990 USP19O94966 1318 aa31.01■■■□□ 2.56
SMARCD2-206ENST00000577990 NLRP13Q86W25 1043 aa31.01■■■□□ 2.55
SMARCD2-206ENST00000577990 TERF2IPQ9NYB0 399 aa31.01■■■□□ 2.55
SMARCD2-206ENST00000577990 TTC21AQ8NDW8 1320 aa31■■■□□ 2.55
SMARCD2-206ENST00000577990 HSPA5P11021 654 aaKnown RBP31■■■□□ 2.55
SMARCD2-206ENST00000577990 A0A1W2PP64 1363 aa30.99■■■□□ 2.55
SMARCD2-206ENST00000577990 VPS72Q15906 364 aa30.98■■■□□ 2.55
SMARCD2-206ENST00000577990 CCDC9Q9Y3X0 531 aaKnown RBP30.98■■■□□ 2.55
SMARCD2-206ENST00000577990 NLRP6P59044 892 aa30.97■■■□□ 2.55
SMARCD2-206ENST00000577990 BTG4Q9NY30 223 aa30.95■■■□□ 2.55
SMARCD2-206ENST00000577990 EDC4Q6P2E9 1401 aaKnown RBP30.95■■■□□ 2.54
SMARCD2-206ENST00000577990 KIAA0232Q92628 1395 aa30.94■■■□□ 2.54
SMARCD2-206ENST00000577990 SLIT3O75094 1523 aa30.93■■■□□ 2.54
SMARCD2-206ENST00000577990 PRDM11Q9NQV5 511 aa30.93■■■□□ 2.54
SMARCD2-206ENST00000577990 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.92■■■□□ 2.54
SMARCD2-206ENST00000577990 ANKRD36BQ8N2N9 1353 aa30.92■■■□□ 2.54
SMARCD2-206ENST00000577990 GCP02774 474 aa30.91■■■□□ 2.54
SMARCD2-206ENST00000577990 ZC3H6P61129 1189 aaKnown RBP30.91■■■□□ 2.54
SMARCD2-206ENST00000577990 SEPT12Q8IYM1 358 aa30.89■■■□□ 2.54
SMARCD2-206ENST00000577990 MYOM1P52179 1685 aa30.89■■■□□ 2.54
SMARCD2-206ENST00000577990 CPDO75976 1380 aa30.89■■■□□ 2.54
SMARCD2-206ENST00000577990 USP54Q70EL1 1684 aa30.87■■■□□ 2.53
SMARCD2-206ENST00000577990 CHRNA2Q15822 529 aa30.86■■■□□ 2.53
SMARCD2-206ENST00000577990 NME9Q86XW9 330 aa30.86■■■□□ 2.53
SMARCD2-206ENST00000577990 USP31Q70CQ4 1352 aa30.86■■■□□ 2.53
SMARCD2-206ENST00000577990 A0A0G2JS52 829 aa30.83■■■□□ 2.53
SMARCD2-206ENST00000577990 MYT1Q01538 1121 aa30.83■■■□□ 2.53
SMARCD2-206ENST00000577990 ZRANB1Q9UGI0 708 aa30.83■■■□□ 2.53
SMARCD2-206ENST00000577990 FAM98CQ17RN3 349 aaKnown RBP30.82■■■□□ 2.52
SMARCD2-206ENST00000577990 KCNH5Q8NCM2 988 aa30.82■■■□□ 2.52
SMARCD2-206ENST00000577990 ONECUT3O60422 494 aaPredicted RBP30.81■■■□□ 2.52
SMARCD2-206ENST00000577990 POLR3GLQ9BT43 218 aa30.81■■■□□ 2.52
SMARCD2-206ENST00000577990 LMO7Q8WWI1 1683 aa30.8■■■□□ 2.52
SMARCD2-206ENST00000577990 NFAT5O94916 1531 aa30.78■■■□□ 2.52
SMARCD2-206ENST00000577990 SPATA31A5Q5VU36 1347 aa30.78■■■□□ 2.52
SMARCD2-206ENST00000577990 SPATA31A7Q8IWB4 1347 aa30.78■■■□□ 2.52
SMARCD2-206ENST00000577990 OVOS2A0A0J9YW53 1432 aa30.78■■■□□ 2.52
SMARCD2-206ENST00000577990 OVOS2Q6IE36 1432 aa30.78■■■□□ 2.52
SMARCD2-206ENST00000577990 ZBTB7CA1YPR0 619 aa30.77■■■□□ 2.52
SMARCD2-206ENST00000577990 SOX12O15370 315 aa30.77■■■□□ 2.52
SMARCD2-206ENST00000577990 KRT27Q7Z3Y8 459 aa30.76■■■□□ 2.51
SMARCD2-206ENST00000577990 STRN4Q9NRL3 753 aa30.76■■■□□ 2.51
SMARCD2-206ENST00000577990 THSD7AQ9UPZ6 1657 aa30.76■■■□□ 2.51
SMARCD2-206ENST00000577990 CAMTA1Q9Y6Y1 1673 aa30.76■■■□□ 2.51
SMARCD2-206ENST00000577990 AATKQ6ZMQ8 1374 aa30.75■■■□□ 2.51
SMARCD2-206ENST00000577990 BLMP54132 1417 aaPredicted RBP30.73■■■□□ 2.51
SMARCD2-206ENST00000577990 C11orf95C9JLR9 678 aaPredicted RBP30.73■■■□□ 2.51
SMARCD2-206ENST00000577990 ARHGEF25Q86VW2 580 aa30.73■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms