RNA–Protein interactions for RNA: ENST00000577830.5

CUEDC1-206, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUEDC1, Length 3,621 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-206ENST00000577830 TRIM35Q9UPQ4 493 aa18.5■□□□□ 0.55
CUEDC1-206ENST00000577830 TRAK2O60296 914 aa18.5■□□□□ 0.55
CUEDC1-206ENST00000577830 RNF17Q9BXT8 1623 aaKnown RBP18.5■□□□□ 0.55
CUEDC1-206ENST00000577830 IQGAP1P46940 1657 aa18.49■□□□□ 0.55
CUEDC1-206ENST00000577830 FRMPD1Q5SYB0 1578 aa18.49■□□□□ 0.55
CUEDC1-206ENST00000577830 VWDEQ8N2E2 1590 aa18.49■□□□□ 0.55
CUEDC1-206ENST00000577830 IPO8O15397 1037 aaKnown RBP18.49■□□□□ 0.55
CUEDC1-206ENST00000577830 L1TD1Q5T7N2 865 aaKnown RBP18.49■□□□□ 0.55
CUEDC1-206ENST00000577830 HDGFL2Q7Z4V5 671 aaPredicted RBP18.49■□□□□ 0.55
CUEDC1-206ENST00000577830 NINLQ9Y2I6 1382 aa18.49■□□□□ 0.55
CUEDC1-206ENST00000577830 FYB1O15117 783 aa18.49■□□□□ 0.55
CUEDC1-206ENST00000577830 CHMP5Q9NZZ3 219 aa18.48■□□□□ 0.55
CUEDC1-206ENST00000577830 PKNOX2Q96KN3 472 aa18.48■□□□□ 0.55
CUEDC1-206ENST00000577830 WAPLQ7Z5K2 1190 aa18.48■□□□□ 0.55
CUEDC1-206ENST00000577830 NCLP19338 710 aaKnown RBP18.47■□□□□ 0.55
CUEDC1-206ENST00000577830 DCTN1Q14203 1278 aa18.47■□□□□ 0.55
CUEDC1-206ENST00000577830 ANTXR1Q9H6X2 564 aa18.47■□□□□ 0.55
CUEDC1-206ENST00000577830 HECW2Q9P2P5 1572 aa18.47■□□□□ 0.55
CUEDC1-206ENST00000577830 RBM42Q9BTD8 480 aaKnown RBP18.47■□□□□ 0.55
CUEDC1-206ENST00000577830 RRAGDQ9NQL2 400 aaPredicted RBP18.46■□□□□ 0.55
CUEDC1-206ENST00000577830 ESF1Q9H501 851 aaKnown RBP18.46■□□□□ 0.55
CUEDC1-206ENST00000577830 ABCA6Q8N139 1617 aa18.46■□□□□ 0.55
CUEDC1-206ENST00000577830 TSPYL6Q8N831 410 aa18.46■□□□□ 0.54
CUEDC1-206ENST00000577830 CDK19Q9BWU1 502 aa18.46■□□□□ 0.54
CUEDC1-206ENST00000577830 A0A1W2PP64 1363 aa18.45■□□□□ 0.54
CUEDC1-206ENST00000577830 XRCC6P12956 609 aaKnown RBP eCLIP18.45■□□□□ 0.54
CUEDC1-206ENST00000577830 ZRANB1Q9UGI0 708 aa18.45■□□□□ 0.54
CUEDC1-206ENST00000577830 TPRNQ4KMQ1 711 aa18.44■□□□□ 0.54
CUEDC1-206ENST00000577830 PHACTR3Q96KR7 559 aa18.44■□□□□ 0.54
CUEDC1-206ENST00000577830 ABCC3O15438 1527 aa18.44■□□□□ 0.54
CUEDC1-206ENST00000577830 EMILIN1Q9Y6C2 1016 aa18.43■□□□□ 0.54
CUEDC1-206ENST00000577830 MYOM1P52179 1685 aa18.43■□□□□ 0.54
CUEDC1-206ENST00000577830 FAM83GA6ND36 823 aa18.43■□□□□ 0.54
CUEDC1-206ENST00000577830 NEO1Q92859 1461 aa18.43■□□□□ 0.54
CUEDC1-206ENST00000577830 CHD1LQ86WJ1 897 aa18.43■□□□□ 0.54
CUEDC1-206ENST00000577830 MROH2AA6NES4 1674 aa18.43■□□□□ 0.54
CUEDC1-206ENST00000577830 CCDC27Q2M243 656 aa18.42■□□□□ 0.54
CUEDC1-206ENST00000577830 MAP3K4Q9Y6R4 1608 aa18.42■□□□□ 0.54
CUEDC1-206ENST00000577830 RRS1Q15050 365 aaKnown RBP18.42■□□□□ 0.54
CUEDC1-206ENST00000577830 FAM43AQ8N2R8 423 aa18.42■□□□□ 0.54
CUEDC1-206ENST00000577830 TSPOAP1O95153 1857 aa18.41■□□□□ 0.54
CUEDC1-206ENST00000577830 FOXD4L5Q5VV16 416 aaPredicted RBP18.41■□□□□ 0.54
CUEDC1-206ENST00000577830 FOXD4L4Q8WXT5 416 aaPredicted RBP18.41■□□□□ 0.54
CUEDC1-206ENST00000577830 PHF23Q9BUL5 403 aaPredicted RBP18.41■□□□□ 0.54
CUEDC1-206ENST00000577830 ANKRD36BQ8N2N9 1353 aa18.41■□□□□ 0.54
CUEDC1-206ENST00000577830 ATAD2Q6PL18 1390 aa18.41■□□□□ 0.54
CUEDC1-206ENST00000577830 KIF1BO60333 1816 aa18.4■□□□□ 0.54
CUEDC1-206ENST00000577830 ZBTB40Q9NUA8 1239 aa18.4■□□□□ 0.54
CUEDC1-206ENST00000577830 SLC52A1Q9NWF4 448 aa18.4■□□□□ 0.54
CUEDC1-206ENST00000577830 NCKAP5LQ9HCH0 1330 aa18.4■□□□□ 0.54
CUEDC1-206ENST00000577830 PLEKHF1Q96S99 279 aa18.4■□□□□ 0.54
CUEDC1-206ENST00000577830 KIF16BQ96L93 1317 aa18.39■□□□□ 0.54
CUEDC1-206ENST00000577830 RPGRIP1LQ68CZ1 1315 aa18.39■□□□□ 0.53
CUEDC1-206ENST00000577830 MYOM2P54296 1465 aa18.39■□□□□ 0.53
CUEDC1-206ENST00000577830 AAMPQ13685 434 aa18.39■□□□□ 0.53
CUEDC1-206ENST00000577830 HDAC1Q13547 482 aaPredicted RBP18.37■□□□□ 0.53
CUEDC1-206ENST00000577830 TRIM44Q96DX7 344 aaPredicted RBP18.37■□□□□ 0.53
CUEDC1-206ENST00000577830 NME9Q86XW9 330 aa18.37■□□□□ 0.53
CUEDC1-206ENST00000577830 PNNQ9H307 717 aaKnown RBP18.37■□□□□ 0.53
CUEDC1-206ENST00000577830 KRT24Q2M2I5 525 aa18.37■□□□□ 0.53
CUEDC1-206ENST00000577830 TNPO1Q92973 898 aaKnown RBP18.36■□□□□ 0.53
CUEDC1-206ENST00000577830 DIP2CQ9Y2E4 1556 aa18.36■□□□□ 0.53
CUEDC1-206ENST00000577830 CD2BP2O95400 341 aaKnown RBP18.36■□□□□ 0.53
CUEDC1-206ENST00000577830 SMC5Q8IY18 1101 aa18.36■□□□□ 0.53
CUEDC1-206ENST00000577830 ADGRB3O60242 1522 aa18.36■□□□□ 0.53
CUEDC1-206ENST00000577830 UBE2Q2Q8WVN8 375 aa18.35■□□□□ 0.53
CUEDC1-206ENST00000577830 LMTK2Q8IWU2 1503 aa18.35■□□□□ 0.53
CUEDC1-206ENST00000577830 NUCB1Q02818 461 aa18.35■□□□□ 0.53
CUEDC1-206ENST00000577830 NOL8Q76FK4 1167 aaKnown RBP18.35■□□□□ 0.53
CUEDC1-206ENST00000577830 C16orf71Q8IYS4 520 aaPredicted RBP18.35■□□□□ 0.53
CUEDC1-206ENST00000577830 CFAP74Q9C0B2 1584 aa18.35■□□□□ 0.53
CUEDC1-206ENST00000577830 TWISTNBQ3B726 338 aaPredicted RBP18.35■□□□□ 0.53
CUEDC1-206ENST00000577830 A0A0U1RQG5 324 aaPredicted RBP18.34■□□□□ 0.53
CUEDC1-206ENST00000577830 SLC4A10Q6U841 1118 aa18.34■□□□□ 0.53
CUEDC1-206ENST00000577830 SBNO2Q9Y2G9 1366 aa18.34■□□□□ 0.53
CUEDC1-206ENST00000577830 NLRP1Q9C000 1473 aa18.33■□□□□ 0.53
CUEDC1-206ENST00000577830 SMARCA5O60264 1052 aaPredicted RBP18.33■□□□□ 0.53
CUEDC1-206ENST00000577830 TBC1D9Q6ZT07 1266 aa18.33■□□□□ 0.53
CUEDC1-206ENST00000577830 ZBTB7CA1YPR0 619 aa18.33■□□□□ 0.52
CUEDC1-206ENST00000577830 C8orf58Q8NAV2 365 aa18.33■□□□□ 0.52
CUEDC1-206ENST00000577830 MIS18AQ9NYP9 233 aa18.33■□□□□ 0.52
CUEDC1-206ENST00000577830 POLKQ9UBT6 870 aa18.33■□□□□ 0.52
CUEDC1-206ENST00000577830 TXNDC2Q86VQ3 553 aa18.32■□□□□ 0.52
CUEDC1-206ENST00000577830 SSFA2P28290 1259 aa18.32■□□□□ 0.52
CUEDC1-206ENST00000577830 FOXD4L6Q3SYB3 417 aaPredicted RBP18.32■□□□□ 0.52
CUEDC1-206ENST00000577830 FOXD4L3Q6VB84 417 aaPredicted RBP18.32■□□□□ 0.52
CUEDC1-206ENST00000577830 MBIPQ9NS73 344 aa18.32■□□□□ 0.52
CUEDC1-206ENST00000577830 GBP4Q96PP9 640 aa18.32■□□□□ 0.52
CUEDC1-206ENST00000577830 RSPH6AQ9H0K4 717 aa18.32■□□□□ 0.52
CUEDC1-206ENST00000577830 DDX11L8A8MPP1 907 aa18.31■□□□□ 0.52
CUEDC1-206ENST00000577830 NECTIN2Q92692 538 aa18.31■□□□□ 0.52
CUEDC1-206ENST00000577830 GRPEL1Q9HAV7 217 aa18.31■□□□□ 0.52
CUEDC1-206ENST00000577830 CT47B1P0C2W7 299 aaPredicted RBP18.31■□□□□ 0.52
CUEDC1-206ENST00000577830 FCHSD2O94868 740 aa18.3■□□□□ 0.52
CUEDC1-206ENST00000577830 VAMP4O75379 141 aa18.3■□□□□ 0.52
CUEDC1-206ENST00000577830 CEBPAP49715 358 aaPredicted RBP18.3■□□□□ 0.52
CUEDC1-206ENST00000577830 NFE2L2Q16236 605 aa18.3■□□□□ 0.52
CUEDC1-206ENST00000577830 DDX49Q9Y6V7 483 aaKnown RBP18.29■□□□□ 0.52
CUEDC1-206ENST00000577830 IQSEC2Q5JU85 1478 aa18.29■□□□□ 0.52
CUEDC1-206ENST00000577830 OTUD7AQ8TE49 926 aaPredicted RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms