RNA–Protein interactions for RNA: ENST00000577578.5

CSNK1D-206, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 928 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-206ENST00000577578 GLI3P10071 1580 aa17.83■□□□□ 0.45
CSNK1D-206ENST00000577578 ACEP12821 1306 aa17.83■□□□□ 0.44
CSNK1D-206ENST00000577578 HAP1P54257 671 aaPredicted RBP17.83■□□□□ 0.44
CSNK1D-206ENST00000577578 UPF1Q92900 1129 aaKnown RBP eCLIP17.83■□□□□ 0.442e-38■■■■■ 57.1
CSNK1D-206ENST00000577578 RALGAPBQ86X10 1494 aa17.82■□□□□ 0.44
CSNK1D-206ENST00000577578 PPIP5K1Q6PFW1 1433 aa17.82■□□□□ 0.44
CSNK1D-206ENST00000577578 COL14A1Q05707 1796 aaKnown RBP17.82■□□□□ 0.44
CSNK1D-206ENST00000577578 NRAPQ86VF7 1730 aa17.82■□□□□ 0.44
CSNK1D-206ENST00000577578 GJD4Q96KN9 370 aaPredicted RBP17.82■□□□□ 0.44
CSNK1D-206ENST00000577578 PHRF1Q9P1Y6 1649 aaKnown RBP17.82■□□□□ 0.44
CSNK1D-206ENST00000577578 TONSLQ96HA7 1378 aa17.81■□□□□ 0.44
CSNK1D-206ENST00000577578 SRPK2P78362 688 aaKnown RBP17.81■□□□□ 0.44
CSNK1D-206ENST00000577578 SBNO2Q9Y2G9 1366 aa17.8■□□□□ 0.44
CSNK1D-206ENST00000577578 FAM83GA6ND36 823 aa17.8■□□□□ 0.44
CSNK1D-206ENST00000577578 CABP2Q9NPB3 220 aa17.8■□□□□ 0.44
CSNK1D-206ENST00000577578 BRD4O60885 1362 aaPredicted RBP17.79■□□□□ 0.44
CSNK1D-206ENST00000577578 PAK3O75914 559 aaPredicted RBP17.79■□□□□ 0.44
CSNK1D-206ENST00000577578 EVC2Q86UK5 1308 aa17.78■□□□□ 0.44
CSNK1D-206ENST00000577578 VPS72Q15906 364 aa17.78■□□□□ 0.44
CSNK1D-206ENST00000577578 NRKQ7Z2Y5 1582 aa17.76■□□□□ 0.43
CSNK1D-206ENST00000577578 USP6P35125 1406 aa17.76■□□□□ 0.43
CSNK1D-206ENST00000577578 PLEKHG5O94827 1062 aa17.76■□□□□ 0.43
CSNK1D-206ENST00000577578 ATAD2Q6PL18 1390 aa17.76■□□□□ 0.43
CSNK1D-206ENST00000577578 SSH2Q76I76 1423 aa17.75■□□□□ 0.43
CSNK1D-206ENST00000577578 CARD11Q9BXL7 1154 aa17.75■□□□□ 0.43
CSNK1D-206ENST00000577578 CABP1Q9NZU7 370 aa17.75■□□□□ 0.43
CSNK1D-206ENST00000577578 AKAP12Q02952 1782 aa17.75■□□□□ 0.43
CSNK1D-206ENST00000577578 BRWD3Q6RI45 1802 aa17.75■□□□□ 0.43
CSNK1D-206ENST00000577578 USP19O94966 1318 aa17.74■□□□□ 0.43
CSNK1D-206ENST00000577578 ONECUT3O60422 494 aaPredicted RBP17.74■□□□□ 0.43
CSNK1D-206ENST00000577578 BTG4Q9NY30 223 aa17.73■□□□□ 0.43
CSNK1D-206ENST00000577578 KIAA0232Q92628 1395 aa17.72■□□□□ 0.43
CSNK1D-206ENST00000577578 ABTB2Q8N961 1025 aa17.72■□□□□ 0.43
CSNK1D-206ENST00000577578 CPDO75976 1380 aa17.71■□□□□ 0.43
CSNK1D-206ENST00000577578 PRDM11Q9NQV5 511 aa17.71■□□□□ 0.43
CSNK1D-206ENST00000577578 CPSF1Q10570 1443 aaKnown RBP17.71■□□□□ 0.43
CSNK1D-206ENST00000577578 PIK3C2AO00443 1686 aa17.71■□□□□ 0.42
CSNK1D-206ENST00000577578 LMO7Q8WWI1 1683 aa17.71■□□□□ 0.42
CSNK1D-206ENST00000577578 MON2Q7Z3U7 1717 aa17.69■□□□□ 0.42
CSNK1D-206ENST00000577578 SLIT3O75094 1523 aa17.69■□□□□ 0.42
CSNK1D-206ENST00000577578 NUTM2GQ5VZR2 741 aa17.69■□□□□ 0.42
CSNK1D-206ENST00000577578 NLRP13Q86W25 1043 aa17.69■□□□□ 0.42
CSNK1D-206ENST00000577578 ZNF692Q9BU19 519 aaPredicted RBP17.68■□□□□ 0.42
CSNK1D-206ENST00000577578 SPATA31A5Q5VU36 1347 aa17.68■□□□□ 0.42
CSNK1D-206ENST00000577578 SPATA31A7Q8IWB4 1347 aa17.68■□□□□ 0.42
CSNK1D-206ENST00000577578 CLSPNQ9HAW4 1339 aa17.68■□□□□ 0.42
CSNK1D-206ENST00000577578 SEPT12Q8IYM1 358 aa17.67■□□□□ 0.42
CSNK1D-206ENST00000577578 THSD7AQ9UPZ6 1657 aa17.67■□□□□ 0.42
CSNK1D-206ENST00000577578 GCP02774 474 aa17.66■□□□□ 0.42
CSNK1D-206ENST00000577578 ZC3H6P61129 1189 aaKnown RBP17.66■□□□□ 0.42
CSNK1D-206ENST00000577578 CCDC9Q9Y3X0 531 aaKnown RBP17.66■□□□□ 0.42
CSNK1D-206ENST00000577578 CAMTA1Q9Y6Y1 1673 aa17.66■□□□□ 0.42
CSNK1D-206ENST00000577578 CD163L1Q9NR16 1453 aa17.65■□□□□ 0.42
CSNK1D-206ENST00000577578 CHRNA2Q15822 529 aa17.65■□□□□ 0.42
CSNK1D-206ENST00000577578 CCDC125Q86Z20 511 aa17.65■□□□□ 0.42
CSNK1D-206ENST00000577578 PUS7Q96PZ0 661 aaKnown RBP17.65■□□□□ 0.42
CSNK1D-206ENST00000577578 TESK2Q96S53 571 aa17.64■□□□□ 0.41
CSNK1D-206ENST00000577578 TIMELESSQ9UNS1 1208 aa17.64■□□□□ 0.41
CSNK1D-206ENST00000577578 NLRP6P59044 892 aa17.63■□□□□ 0.41
CSNK1D-206ENST00000577578 USP54Q70EL1 1684 aa17.63■□□□□ 0.41
CSNK1D-206ENST00000577578 SPATA31A1Q5TZJ5 1347 aa17.63■□□□□ 0.41
CSNK1D-206ENST00000577578 TTC21BQ7Z4L5 1316 aa17.63■□□□□ 0.41
CSNK1D-206ENST00000577578 TTC21AQ8NDW8 1320 aa17.63■□□□□ 0.41
CSNK1D-206ENST00000577578 COL18A1P39060 1754 aa17.62■□□□□ 0.41
CSNK1D-206ENST00000577578 FAM98CQ17RN3 349 aaKnown RBP17.62■□□□□ 0.41
CSNK1D-206ENST00000577578 KTN1Q86UP2 1357 aaKnown RBP17.62■□□□□ 0.41
CSNK1D-206ENST00000577578 KRT27Q7Z3Y8 459 aa17.61■□□□□ 0.41
CSNK1D-206ENST00000577578 ST20-MTHFSA0A0A6YYL1 179 aa17.6■□□□□ 0.41
CSNK1D-206ENST00000577578 SLC24A1O60721 1099 aa17.6■□□□□ 0.41
CSNK1D-206ENST00000577578 AATKQ6ZMQ8 1374 aa17.6■□□□□ 0.41
CSNK1D-206ENST00000577578 BLMP54132 1417 aaPredicted RBP17.6■□□□□ 0.41
CSNK1D-206ENST00000577578 COL5A2P05997 1499 aaPredicted RBP17.6■□□□□ 0.41
CSNK1D-206ENST00000577578 NFAT5O94916 1531 aa17.58■□□□□ 0.41
CSNK1D-206ENST00000577578 USP31Q70CQ4 1352 aa17.58■□□□□ 0.4
CSNK1D-206ENST00000577578 NINLQ9Y2I6 1382 aa17.58■□□□□ 0.4
CSNK1D-206ENST00000577578 STRN4Q9NRL3 753 aa17.58■□□□□ 0.4
CSNK1D-206ENST00000577578 USP47Q96K76 1375 aa17.57■□□□□ 0.4
CSNK1D-206ENST00000577578 BARGINQ6ZT62 677 aa17.57■□□□□ 0.4
CSNK1D-206ENST00000577578 PCGF6Q9BYE7 350 aa17.57■□□□□ 0.4
CSNK1D-206ENST00000577578 KCNH5Q8NCM2 988 aa17.56■□□□□ 0.4
CSNK1D-206ENST00000577578 SLC12A5Q9H2X9 1139 aa17.56■□□□□ 0.4
CSNK1D-206ENST00000577578 ABCC6O95255 1503 aa17.56■□□□□ 0.4
CSNK1D-206ENST00000577578 EDC4Q6P2E9 1401 aaKnown RBP17.55■□□□□ 0.4
CSNK1D-206ENST00000577578 A0A1W2PP64 1363 aa17.55■□□□□ 0.4
CSNK1D-206ENST00000577578 EVA1CP58658 441 aa17.55■□□□□ 0.4
CSNK1D-206ENST00000577578 LARP1Q6PKG0 1096 aaKnown RBP17.55■□□□□ 0.4
CSNK1D-206ENST00000577578 ARHGEF25Q86VW2 580 aa17.55■□□□□ 0.4
CSNK1D-206ENST00000577578 RGPD5Q99666 1765 aa17.54■□□□□ 0.4
CSNK1D-206ENST00000577578 A0A0G2JS52 829 aa17.54■□□□□ 0.4
CSNK1D-206ENST00000577578 MYT1Q01538 1121 aa17.54■□□□□ 0.4
CSNK1D-206ENST00000577578 TMC1Q8TDI8 760 aa17.54■□□□□ 0.4
CSNK1D-206ENST00000577578 TERF2IPQ9NYB0 399 aa17.54■□□□□ 0.4
CSNK1D-206ENST00000577578 PARP4Q9UKK3 1724 aaKnown RBP17.54■□□□□ 0.4
CSNK1D-206ENST00000577578 CRB1P82279 1406 aa17.54■□□□□ 0.4
CSNK1D-206ENST00000577578 HDGFL2Q7Z4V5 671 aaPredicted RBP17.53■□□□□ 0.4
CSNK1D-206ENST00000577578 THRAP3Q9Y2W1 955 aaKnown RBP17.53■□□□□ 0.4
CSNK1D-206ENST00000577578 RGPD1P0DJD0 1748 aa17.52■□□□□ 0.4
CSNK1D-206ENST00000577578 SRCAPQ6ZRS2 3230 aa17.52■□□□□ 0.4
CSNK1D-206ENST00000577578 TCP11L2Q8N4U5 519 aa17.52■□□□□ 0.4
CSNK1D-206ENST00000577578 OVOS2A0A0J9YW53 1432 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms