RNA–Protein interactions for RNA: ENST00000577498.1

IFT20-204, Transcript of intraflagellar transport 20, humanhuman

TSL 4

Gene IFT20, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-204ENST00000577498 TTC21AQ8NDW8 1320 aa20.32■□□□□ 0.84
IFT20-204ENST00000577498 PHF8Q9UPP1 1060 aa20.31■□□□□ 0.84
IFT20-204ENST00000577498 HNRNPUQ00839 825 aaKnown RBP eCLIP20.3■□□□□ 0.84
IFT20-204ENST00000577498 PMFBP1Q8TBY8 1022 aa20.3■□□□□ 0.84
IFT20-204ENST00000577498 NME9Q86XW9 330 aa20.29■□□□□ 0.84
IFT20-204ENST00000577498 CFAP53Q96M91 514 aa20.29■□□□□ 0.84
IFT20-204ENST00000577498 TNNT2P45379 298 aaPredicted RBP20.28■□□□□ 0.84
IFT20-204ENST00000577498 COG3Q96JB2 828 aa20.28■□□□□ 0.84
IFT20-204ENST00000577498 AATKQ6ZMQ8 1374 aa20.27■□□□□ 0.84
IFT20-204ENST00000577498 ATF3P18847 181 aa20.27■□□□□ 0.84
IFT20-204ENST00000577498 MTHFSP49914 203 aa20.27■□□□□ 0.84
IFT20-204ENST00000577498 WDR43Q15061 677 aaKnown RBP eCLIP20.27■□□□□ 0.84
IFT20-204ENST00000577498 LRRC7Q96NW7 1537 aa20.27■□□□□ 0.83
IFT20-204ENST00000577498 C1orf167Q5SNV9 1468 aa20.26■□□□□ 0.83
IFT20-204ENST00000577498 MSH6P52701 1360 aa20.26■□□□□ 0.83
IFT20-204ENST00000577498 BLMP54132 1417 aaPredicted RBP20.26■□□□□ 0.83
IFT20-204ENST00000577498 USP31Q70CQ4 1352 aa20.25■□□□□ 0.83
IFT20-204ENST00000577498 CADPS2Q86UW7 1296 aa20.25■□□□□ 0.83
IFT20-204ENST00000577498 OVOS2A0A0J9YW53 1432 aa20.25■□□□□ 0.83
IFT20-204ENST00000577498 OVOS2Q6IE36 1432 aa20.25■□□□□ 0.83
IFT20-204ENST00000577498 KIF1AQ12756 1690 aa20.25■□□□□ 0.83
IFT20-204ENST00000577498 ZBED9Q6R2W3 1325 aa20.25■□□□□ 0.83
IFT20-204ENST00000577498 ZNF335Q9H4Z2 1342 aaPredicted RBP20.25■□□□□ 0.83
IFT20-204ENST00000577498 ESCO1Q5FWF5 840 aa20.24■□□□□ 0.83
IFT20-204ENST00000577498 MST1RQ04912 1400 aa20.24■□□□□ 0.83
IFT20-204ENST00000577498 SMG6Q86US8 1419 aaKnown RBP20.23■□□□□ 0.83
IFT20-204ENST00000577498 XIRP1Q702N8 1843 aaKnown RBP20.23■□□□□ 0.83
IFT20-204ENST00000577498 USP54Q70EL1 1684 aa20.22■□□□□ 0.83
IFT20-204ENST00000577498 ZRANB1Q9UGI0 708 aa20.21■□□□□ 0.83
IFT20-204ENST00000577498 ADAMTS8Q9UP79 889 aa20.21■□□□□ 0.83
IFT20-204ENST00000577498 PNPLA6Q8IY17 1366 aa20.21■□□□□ 0.83
IFT20-204ENST00000577498 PIK3C2AO00443 1686 aa20.19■□□□□ 0.82
IFT20-204ENST00000577498 SHPRHQ149N8 1683 aa20.19■□□□□ 0.82
IFT20-204ENST00000577498 COL3A1P02461 1466 aaPredicted RBP20.19■□□□□ 0.82
IFT20-204ENST00000577498 PSME1Q06323 249 aa20.18■□□□□ 0.82
IFT20-204ENST00000577498 ORAI2Q96SN7 254 aa20.18■□□□□ 0.82
IFT20-204ENST00000577498 POLKQ9UBT6 870 aa20.18■□□□□ 0.82
IFT20-204ENST00000577498 CDK12Q9NYV4 1490 aaPredicted RBP20.18■□□□□ 0.82
IFT20-204ENST00000577498 NUDCQ9Y266 331 aa20.15■□□□□ 0.82
IFT20-204ENST00000577498 MAP2P11137 1827 aaKnown RBP20.15■□□□□ 0.82
IFT20-204ENST00000577498 DIAPH1O60610 1272 aaKnown RBP20.13■□□□□ 0.81
IFT20-204ENST00000577498 NLRP6P59044 892 aa20.13■□□□□ 0.81
IFT20-204ENST00000577498 ABTB2Q8N961 1025 aa20.13■□□□□ 0.81
IFT20-204ENST00000577498 FOXO3O43524 673 aa20.12■□□□□ 0.81
IFT20-204ENST00000577498 PAK3O75914 559 aaPredicted RBP20.12■□□□□ 0.81
IFT20-204ENST00000577498 NGEFQ8N5V2 710 aa20.12■□□□□ 0.81
IFT20-204ENST00000577498 TRPM3Q9HCF6 1732 aaPredicted RBP20.12■□□□□ 0.81
IFT20-204ENST00000577498 MARF1Q9Y4F3 1742 aaKnown RBP20.11■□□□□ 0.81
IFT20-204ENST00000577498 KRT28Q7Z3Y7 464 aa20.11■□□□□ 0.81
IFT20-204ENST00000577498 EMILIN1Q9Y6C2 1016 aa20.11■□□□□ 0.81
IFT20-204ENST00000577498 SBNO1A3KN83 1393 aa20.09■□□□□ 0.81
IFT20-204ENST00000577498 KIF24Q5T7B8 1368 aa20.09■□□□□ 0.81
IFT20-204ENST00000577498 NPHP3Q7Z494 1330 aa20.09■□□□□ 0.81
IFT20-204ENST00000577498 FBLN1P23142 703 aa20.08■□□□□ 0.81
IFT20-204ENST00000577498 PDE3BQ13370 1112 aa20.08■□□□□ 0.81
IFT20-204ENST00000577498 RRS1Q15050 365 aaKnown RBP20.08■□□□□ 0.81
IFT20-204ENST00000577498 LTBP4Q8N2S1 1624 aa20.07■□□□□ 0.8
IFT20-204ENST00000577498 PPM1GO15355 546 aaPredicted RBP20.07■□□□□ 0.8
IFT20-204ENST00000577498 U2AF1L5P0DN76 240 aaPredicted RBP20.07■□□□□ 0.8
IFT20-204ENST00000577498 U2AF1Q01081 240 aaKnown RBP eCLIP20.07■□□□□ 0.8
IFT20-204ENST00000577498 SLAIN2Q9P270 581 aa20.07■□□□□ 0.8
IFT20-204ENST00000577498 RUNDC1Q96C34 613 aa20.06■□□□□ 0.8
IFT20-204ENST00000577498 PNNQ9H307 717 aaKnown RBP20.06■□□□□ 0.8
IFT20-204ENST00000577498 IL13P35225 146 aa20.05■□□□□ 0.8
IFT20-204ENST00000577498 NCBP3Q53F19 620 aaKnown RBP20.05■□□□□ 0.8
IFT20-204ENST00000577498 BRINP3Q76B58 766 aa20.05■□□□□ 0.8
IFT20-204ENST00000577498 KCNH5Q8NCM2 988 aa20.05■□□□□ 0.8
IFT20-204ENST00000577498 USP19O94966 1318 aa20.04■□□□□ 0.8
IFT20-204ENST00000577498 ALS2Q96Q42 1657 aa20.04■□□□□ 0.8
IFT20-204ENST00000577498 SLIT3O75094 1523 aa20.04■□□□□ 0.8
IFT20-204ENST00000577498 U2SURPO15042 1029 aaKnown RBP20.04■□□□□ 0.8
IFT20-204ENST00000577498 CCDC146Q8IYE0 955 aa20.04■□□□□ 0.8
IFT20-204ENST00000577498 FLT4P35916 1363 aa20.04■□□□□ 0.8
IFT20-204ENST00000577498 PEAK1Q9H792 1746 aa20.04■□□□□ 0.8
IFT20-204ENST00000577498 MAP3K19Q56UN5 1328 aa20.03■□□□□ 0.8
IFT20-204ENST00000577498 NFAT5O94916 1531 aa20.03■□□□□ 0.8
IFT20-204ENST00000577498 XPCQ01831 940 aaPredicted RBP20.03■□□□□ 0.8
IFT20-204ENST00000577498 NUTM2GQ5VZR2 741 aa20.03■□□□□ 0.8
IFT20-204ENST00000577498 RTL1A6NKG5 1358 aa20.03■□□□□ 0.8
IFT20-204ENST00000577498 PXDNQ92626 1479 aa20.03■□□□□ 0.8
IFT20-204ENST00000577498 APAF1O14727 1248 aa20.02■□□□□ 0.8
IFT20-204ENST00000577498 FCHSD2O94868 740 aa20.02■□□□□ 0.8
IFT20-204ENST00000577498 IQSEC2Q5JU85 1478 aa20.02■□□□□ 0.8
IFT20-204ENST00000577498 TNS3Q68CZ2 1445 aa20.01■□□□□ 0.79
IFT20-204ENST00000577498 ARHGEF10O15013 1369 aa19.99■□□□□ 0.79
IFT20-204ENST00000577498 PHRF1Q9P1Y6 1649 aaKnown RBP19.99■□□□□ 0.79
IFT20-204ENST00000577498 SOX12O15370 315 aa19.99■□□□□ 0.79
IFT20-204ENST00000577498 AMPHP49418 695 aa19.99■□□□□ 0.79
IFT20-204ENST00000577498 PLEKHF1Q96S99 279 aa19.99■□□□□ 0.79
IFT20-204ENST00000577498 ZNF521Q96K83 1311 aa19.99■□□□□ 0.79
IFT20-204ENST00000577498 EIF4A2Q14240 407 aaKnown RBP19.98■□□□□ 0.79
IFT20-204ENST00000577498 SOS2Q07890 1332 aaPredicted RBP19.98■□□□□ 0.79
IFT20-204ENST00000577498 SPATA31A3Q5VYP0 1347 aa19.98■□□□□ 0.79
IFT20-204ENST00000577498 HSP90AB2PQ58FF8 381 aa19.97■□□□□ 0.79
IFT20-204ENST00000577498 TCP11L2Q8N4U5 519 aa19.97■□□□□ 0.79
IFT20-204ENST00000577498 RSPH6AQ9H0K4 717 aa19.97■□□□□ 0.79
IFT20-204ENST00000577498 HOXC9P31274 260 aa19.96■□□□□ 0.79
IFT20-204ENST00000577498 CCDC27Q2M243 656 aa19.96■□□□□ 0.79
IFT20-204ENST00000577498 LMOD2Q6P5Q4 547 aa19.96■□□□□ 0.79
IFT20-204ENST00000577498 DDX17Q92841 729 aaKnown RBP19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms