RNA–Protein interactions for RNA: ENST00000577134.1

SPOP-222, Transcript of speckle type BTB/POZ protein, human

TSL 2

Gene SPOP, Length 421 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPOP-222	ENST00000577134	NRK	Q7Z2Y5	1582 aa		13.69	□□□□□ -0.22
SPOP-222	ENST00000577134	TTC21B	Q7Z4L5	1316 aa		13.68	□□□□□ -0.22
SPOP-222	ENST00000577134	EDC4	Q6P2E9	1401 aa	Known RBP	13.68	□□□□□ -0.22
SPOP-222	ENST00000577134	SSH2	Q76I76	1423 aa		13.68	□□□□□ -0.22
SPOP-222	ENST00000577134	PER1	O15534	1290 aa	Predicted RBP	13.67	□□□□□ -0.22
SPOP-222	ENST00000577134	FBXO41	Q8TF61	875 aa		13.67	□□□□□ -0.22
SPOP-222	ENST00000577134	SBNO1	A3KN83	1393 aa		13.67	□□□□□ -0.22
SPOP-222	ENST00000577134	COL16A1	Q07092	1604 aa	Predicted RBP	13.67	□□□□□ -0.22
SPOP-222	ENST00000577134	HSPA1L	P34931	641 aa		13.66	□□□□□ -0.22
SPOP-222	ENST00000577134	LMOD2	Q6P5Q4	547 aa		13.66	□□□□□ -0.22
SPOP-222	ENST00000577134	KNSTRN	Q9Y448	316 aa		13.66	□□□□□ -0.22
SPOP-222	ENST00000577134	BRD4	O60885	1362 aa	Predicted RBP	13.66	□□□□□ -0.22
SPOP-222	ENST00000577134	SPATA31A3	Q5VYP0	1347 aa		13.65	□□□□□ -0.22
SPOP-222	ENST00000577134	NUTM2G	Q5VZR2	741 aa		13.65	□□□□□ -0.22
SPOP-222	ENST00000577134	NME9	Q86XW9	330 aa		13.65	□□□□□ -0.22
SPOP-222	ENST00000577134	ALS2	Q96Q42	1657 aa		13.65	□□□□□ -0.22
SPOP-222	ENST00000577134	TTC21A	Q8NDW8	1320 aa		13.64	□□□□□ -0.23
SPOP-222	ENST00000577134	TNS3	Q68CZ2	1445 aa		13.64	□□□□□ -0.23
SPOP-222	ENST00000577134	KIF20B	Q96Q89	1820 aa		13.64	□□□□□ -0.23
SPOP-222	ENST00000577134	PIK3C2A	O00443	1686 aa		13.64	□□□□□ -0.23
SPOP-222	ENST00000577134	ABTB2	Q8N961	1025 aa		13.64	□□□□□ -0.23
SPOP-222	ENST00000577134	LRRC59	Q96AG4	307 aa	Known RBP	13.64	□□□□□ -0.23
SPOP-222	ENST00000577134	ZRANB1	Q9UGI0	708 aa		13.64	□□□□□ -0.23
SPOP-222	ENST00000577134	FYB1	O15117	783 aa		13.63	□□□□□ -0.23
SPOP-222	ENST00000577134	PLEKHG5	O94827	1062 aa		13.63	□□□□□ -0.23
SPOP-222	ENST00000577134	CNGB1	Q14028	1251 aa	Predicted RBP	13.62	□□□□□ -0.23
SPOP-222	ENST00000577134	GGNBP2	Q9H3C7	697 aa		13.62	□□□□□ -0.23
SPOP-222	ENST00000577134	CGNL1	Q0VF96	1302 aa		13.62	□□□□□ -0.23
SPOP-222	ENST00000577134	NLRP6	P59044	892 aa		13.61	□□□□□ -0.23
SPOP-222	ENST00000577134	AMER1	Q5JTC6	1135 aa	Predicted RBP	13.61	□□□□□ -0.23
SPOP-222	ENST00000577134	CC2D1B	Q5T0F9	858 aa	Known RBP	13.61	□□□□□ -0.23
SPOP-222	ENST00000577134	MARF1	Q9Y4F3	1742 aa	Known RBP	13.61	□□□□□ -0.23
SPOP-222	ENST00000577134	ARHGEF10	O15013	1369 aa		13.6	□□□□□ -0.23
SPOP-222	ENST00000577134	USP31	Q70CQ4	1352 aa		13.59	□□□□□ -0.23
SPOP-222	ENST00000577134	PNPLA6	Q8IY17	1366 aa		13.59	□□□□□ -0.23
SPOP-222	ENST00000577134	ANKRD26	Q9UPS8	1709 aa		13.59	□□□□□ -0.23
SPOP-222	ENST00000577134	NLRP13	Q86W25	1043 aa		13.59	□□□□□ -0.23
SPOP-222	ENST00000577134	CABLES1	Q8TDN4	633 aa		13.59	□□□□□ -0.23
SPOP-222	ENST00000577134	COG3	Q96JB2	828 aa		13.58	□□□□□ -0.24
SPOP-222	ENST00000577134	SHPRH	Q149N8	1683 aa		13.58	□□□□□ -0.24
SPOP-222	ENST00000577134	USP54	Q70EL1	1684 aa		13.58	□□□□□ -0.24
SPOP-222	ENST00000577134	MED1	Q15648	1581 aa	Predicted RBP	13.58	□□□□□ -0.24
SPOP-222	ENST00000577134	JCAD	Q9P266	1359 aa		13.58	□□□□□ -0.24
SPOP-222	ENST00000577134	COL22A1	Q8NFW1	1626 aa	Predicted RBP	13.57	□□□□□ -0.24
SPOP-222	ENST00000577134	OVOS2	A0A0J9YW53	1432 aa		13.57	□□□□□ -0.24
SPOP-222	ENST00000577134	OVOS2	Q6IE36	1432 aa		13.57	□□□□□ -0.24
SPOP-222	ENST00000577134	CRYBG1	Q9Y4K1	1723 aa		13.57	□□□□□ -0.24
SPOP-222	ENST00000577134	NSD2	O96028	1365 aa		13.57	□□□□□ -0.24
SPOP-222	ENST00000577134	NPC1L1	Q9UHC9	1359 aa		13.57	□□□□□ -0.24
SPOP-222	ENST00000577134	SOX12	O15370	315 aa		13.56	□□□□□ -0.24
SPOP-222	ENST00000577134	MORC1	Q86VD1	984 aa		13.56	□□□□□ -0.24
SPOP-222	ENST00000577134	USP19	O94966	1318 aa		13.56	□□□□□ -0.24
SPOP-222	ENST00000577134	PHRF1	Q9P1Y6	1649 aa	Known RBP	13.56	□□□□□ -0.24
SPOP-222	ENST00000577134	ABCA3	Q99758	1704 aa		13.56	□□□□□ -0.24
SPOP-222	ENST00000577134	FBLN1	P23142	703 aa		13.55	□□□□□ -0.24
SPOP-222	ENST00000577134	TNNT2	P45379	298 aa	Predicted RBP	13.55	□□□□□ -0.24
SPOP-222	ENST00000577134	SLIT3	O75094	1523 aa		13.54	□□□□□ -0.24
SPOP-222	ENST00000577134	NUTM2B	A6NNL0	878 aa	Predicted RBP	13.54	□□□□□ -0.24
SPOP-222	ENST00000577134	NUTM2E	B1AL46	878 aa	Predicted RBP	13.54	□□□□□ -0.24
SPOP-222	ENST00000577134	GC	P02774	474 aa		13.54	□□□□□ -0.24
SPOP-222	ENST00000577134	HAP1	P54257	671 aa	Predicted RBP	13.54	□□□□□ -0.24
SPOP-222	ENST00000577134	NUTM2A	Q8IVF1	878 aa	Predicted RBP	13.54	□□□□□ -0.24
SPOP-222	ENST00000577134	DIEXF	Q68CQ4	756 aa	Known RBP	13.53	□□□□□ -0.24
SPOP-222	ENST00000577134	ZC3H6	P61129	1189 aa	Known RBP	13.52	□□□□□ -0.25
SPOP-222	ENST00000577134	ILDR1	Q86SU0	546 aa	Predicted RBP	13.52	□□□□□ -0.25
SPOP-222	ENST00000577134	KCNH5	Q8NCM2	988 aa		13.52	□□□□□ -0.25
SPOP-222	ENST00000577134	NFAT5	O94916	1531 aa		13.52	□□□□□ -0.25
SPOP-222	ENST00000577134	MAP2	P11137	1827 aa	Known RBP	13.51	□□□□□ -0.25
SPOP-222	ENST00000577134	PARD3	Q8TEW0	1356 aa		13.51	□□□□□ -0.25
SPOP-222	ENST00000577134	SPATA31A6	Q5VVP1	1343 aa		13.51	□□□□□ -0.25
SPOP-222	ENST00000577134	ZBTB7C	A1YPR0	619 aa		13.51	□□□□□ -0.25
SPOP-222	ENST00000577134	ADAMTS2	O95450	1211 aa		13.5	□□□□□ -0.25
SPOP-222	ENST00000577134	RRS1	Q15050	365 aa	Known RBP	13.5	□□□□□ -0.25
SPOP-222	ENST00000577134	RALBP1	Q15311	655 aa		13.5	□□□□□ -0.25
SPOP-222	ENST00000577134	PRKRIP1	Q9H875	184 aa	Predicted RBP	13.5	□□□□□ -0.25
SPOP-222	ENST00000577134	LTN1	O94822	1766 aa		13.5	□□□□□ -0.25
SPOP-222	ENST00000577134	AATK	Q6ZMQ8	1374 aa		13.49	□□□□□ -0.25
SPOP-222	ENST00000577134	ANP32C	O43423	234 aa		13.49	□□□□□ -0.25
SPOP-222	ENST00000577134	LRP6	O75581	1613 aa		13.49	□□□□□ -0.25
SPOP-222	ENST00000577134	KIAA0232	Q92628	1395 aa		13.48	□□□□□ -0.25
SPOP-222	ENST00000577134	PPP2R1A	P30153	589 aa		13.48	□□□□□ -0.25
SPOP-222	ENST00000577134	ARHGEF25	Q86VW2	580 aa		13.48	□□□□□ -0.25
SPOP-222	ENST00000577134	POLK	Q9UBT6	870 aa		13.48	□□□□□ -0.25
SPOP-222	ENST00000577134	EMILIN1	Q9Y6C2	1016 aa		13.48	□□□□□ -0.25
SPOP-222	ENST00000577134	MAP3K19	Q56UN5	1328 aa		13.47	□□□□□ -0.25
SPOP-222	ENST00000577134	FAM83G	A6ND36	823 aa		13.47	□□□□□ -0.25
SPOP-222	ENST00000577134	PPM1G	O15355	546 aa	Predicted RBP	13.47	□□□□□ -0.25
SPOP-222	ENST00000577134	CHRNA2	Q15822	529 aa		13.47	□□□□□ -0.25
SPOP-222	ENST00000577134	PRDM11	Q9NQV5	511 aa		13.47	□□□□□ -0.25
SPOP-222	ENST00000577134	CPD	O75976	1380 aa		13.46	□□□□□ -0.25
SPOP-222	ENST00000577134	AMPH	P49418	695 aa		13.46	□□□□□ -0.25
SPOP-222	ENST00000577134	MTHFS	P49914	203 aa		13.46	□□□□□ -0.25
SPOP-222	ENST00000577134	PEAK1	Q9H792	1746 aa		13.46	□□□□□ -0.25
SPOP-222	ENST00000577134	COL18A1	P39060	1754 aa		13.45	□□□□□ -0.26
SPOP-222	ENST00000577134	RGPD5	Q99666	1765 aa		13.45	□□□□□ -0.26
SPOP-222	ENST00000577134	MEX3C	Q5U5Q3	659 aa	Known RBP	13.45	□□□□□ -0.26
SPOP-222	ENST00000577134	MYBBP1A	Q9BQG0	1328 aa	Known RBP	13.44	□□□□□ -0.26
SPOP-222	ENST00000577134	HOXC9	P31274	260 aa		13.44	□□□□□ -0.26
SPOP-222	ENST00000577134	C8orf37	Q96NL8	207 aa		13.44	□□□□□ -0.26
SPOP-222	ENST00000577134	AXIN2	Q9Y2T1	843 aa		13.44	□□□□□ -0.26

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