RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 GPR153Q6NV75 609 aa9.65□□□□□ -0.86
NUP88-212ENST00000576708 ARHGAP31Q2M1Z3 1444 aa9.65□□□□□ -0.87
NUP88-212ENST00000576708 IQGAP1P46940 1657 aa9.64□□□□□ -0.87
NUP88-212ENST00000576708 TXNDC2Q86VQ3 553 aa9.64□□□□□ -0.87
NUP88-212ENST00000576708 STRCP1A6NGW2 1772 aa9.64□□□□□ -0.87
NUP88-212ENST00000576708 KANK1Q14678 1352 aa9.63□□□□□ -0.87
NUP88-212ENST00000576708 ZNF316A6NFI3 1004 aaPredicted RBP9.63□□□□□ -0.87
NUP88-212ENST00000576708 TOM1O60784 492 aa9.63□□□□□ -0.87
NUP88-212ENST00000576708 IDI1Q13907 227 aa9.63□□□□□ -0.87
NUP88-212ENST00000576708 PPARGC1BQ86YN6 1023 aaKnown RBP9.63□□□□□ -0.87
NUP88-212ENST00000576708 PIK3C2BO00750 1634 aa9.63□□□□□ -0.87
NUP88-212ENST00000576708 SCAF11Q99590 1463 aaKnown RBP9.62□□□□□ -0.87
NUP88-212ENST00000576708 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.62□□□□□ -0.87
NUP88-212ENST00000576708 ZSWIM6Q9HCJ5 1215 aa9.62□□□□□ -0.87
NUP88-212ENST00000576708 ALKQ9UM73 1620 aa9.62□□□□□ -0.87
NUP88-212ENST00000576708 LRRC7Q96NW7 1537 aa9.61□□□□□ -0.87
NUP88-212ENST00000576708 ARHGAP23Q9P227 1491 aa9.61□□□□□ -0.87
NUP88-212ENST00000576708 TULP1O00294 542 aaPredicted RBP9.61□□□□□ -0.87
NUP88-212ENST00000576708 LMOD2Q6P5Q4 547 aa9.61□□□□□ -0.87
NUP88-212ENST00000576708 ANO8Q9HCE9 1232 aaPredicted RBP9.61□□□□□ -0.87
NUP88-212ENST00000576708 SLIT1O75093 1534 aa9.61□□□□□ -0.87
NUP88-212ENST00000576708 LMTK2Q8IWU2 1503 aa9.61□□□□□ -0.87
NUP88-212ENST00000576708 ADGRL2O95490 1459 aa9.6□□□□□ -0.87
NUP88-212ENST00000576708 SYNMO15061 1565 aa9.6□□□□□ -0.87
NUP88-212ENST00000576708 PRKCSHP14314 528 aaPredicted RBP9.6□□□□□ -0.87
NUP88-212ENST00000576708 RBM26Q5T8P6 1007 aaKnown RBP9.6□□□□□ -0.87
NUP88-212ENST00000576708 SMYD5Q6GMV2 418 aa9.6□□□□□ -0.87
NUP88-212ENST00000576708 EID1Q9Y6B2 187 aa9.6□□□□□ -0.87
NUP88-212ENST00000576708 TMEM2Q9UHN6 1383 aa9.6□□□□□ -0.87
NUP88-212ENST00000576708 SOCS7O14512 581 aa9.59□□□□□ -0.87
NUP88-212ENST00000576708 PTGER2P43116 358 aa9.59□□□□□ -0.87
NUP88-212ENST00000576708 TPRNQ4KMQ1 711 aa9.59□□□□□ -0.87
NUP88-212ENST00000576708 NOS1P29475 1434 aa9.58□□□□□ -0.88
NUP88-212ENST00000576708 ANKRD50Q9ULJ7 1429 aa9.58□□□□□ -0.88
NUP88-212ENST00000576708 EFCAB6Q5THR3 1501 aa9.58□□□□□ -0.88
NUP88-212ENST00000576708 HOXB1P14653 301 aaPredicted RBP9.58□□□□□ -0.88
NUP88-212ENST00000576708 ITGAEP38570 1179 aa9.58□□□□□ -0.88
NUP88-212ENST00000576708 RBM33Q96EV2 1170 aaKnown RBP9.58□□□□□ -0.88
NUP88-212ENST00000576708 SLC26A8Q96RN1 970 aa9.58□□□□□ -0.88
NUP88-212ENST00000576708 LHX6Q9UPM6 363 aa9.58□□□□□ -0.88
NUP88-212ENST00000576708 PRIM1P49642 420 aaKnown RBP9.57□□□□□ -0.88
NUP88-212ENST00000576708 OSBPP22059 807 aa9.56□□□□□ -0.88
NUP88-212ENST00000576708 MARVELD3Q96A59 401 aa9.56□□□□□ -0.88
NUP88-212ENST00000576708 MED1Q15648 1581 aaPredicted RBP9.55□□□□□ -0.88
NUP88-212ENST00000576708 ZNF454Q8N9F8 522 aa9.55□□□□□ -0.88
NUP88-212ENST00000576708 PCDHGA10Q9Y5H3 936 aa9.55□□□□□ -0.88
NUP88-212ENST00000576708 ADGRB3O60242 1522 aa9.55□□□□□ -0.88
NUP88-212ENST00000576708 XIRP1Q702N8 1843 aaKnown RBP9.54□□□□□ -0.88
NUP88-212ENST00000576708 NUTM2DQ5VT03 806 aaPredicted RBP9.54□□□□□ -0.88
NUP88-212ENST00000576708 SLC52A1Q9NWF4 448 aa9.54□□□□□ -0.88
NUP88-212ENST00000576708 TET3O43151 1660 aa9.54□□□□□ -0.88
NUP88-212ENST00000576708 TMEM94Q12767 1356 aa9.53□□□□□ -0.88
NUP88-212ENST00000576708 KDM5AP29375 1690 aaKnown RBP9.53□□□□□ -0.88
NUP88-212ENST00000576708 PHF14O94880 888 aa9.53□□□□□ -0.88
NUP88-212ENST00000576708 KCNA6P17658 529 aa9.53□□□□□ -0.88
NUP88-212ENST00000576708 PROSER2Q86WR7 435 aaPredicted RBP9.53□□□□□ -0.88
NUP88-212ENST00000576708 UNC13BO14795 1591 aa9.52□□□□□ -0.89
NUP88-212ENST00000576708 FOSBP53539 338 aa9.52□□□□□ -0.89
NUP88-212ENST00000576708 RPRD2Q5VT52 1461 aaKnown RBP9.52□□□□□ -0.89
NUP88-212ENST00000576708 MYO5BQ9ULV0 1848 aa9.52□□□□□ -0.89
NUP88-212ENST00000576708 ZFYVE9O95405 1425 aa9.51□□□□□ -0.89
NUP88-212ENST00000576708 RIMS2Q9UQ26 1411 aa9.51□□□□□ -0.89
NUP88-212ENST00000576708 NUTM2FA1L443 756 aa9.51□□□□□ -0.89
NUP88-212ENST00000576708 E9PCH4 1651 aa9.51□□□□□ -0.89
NUP88-212ENST00000576708 GCC2Q8IWJ2 1684 aa9.51□□□□□ -0.89
NUP88-212ENST00000576708 NUP155O75694 1391 aa9.5□□□□□ -0.89
NUP88-212ENST00000576708 ROCK1Q13464 1354 aa9.5□□□□□ -0.89
NUP88-212ENST00000576708 TMEM131LA2VDJ0 1609 aa9.5□□□□□ -0.89
NUP88-212ENST00000576708 PPP1R15AO75807 674 aaPredicted RBP9.5□□□□□ -0.89
NUP88-212ENST00000576708 TYW1BQ6NUM6 668 aa9.5□□□□□ -0.89
NUP88-212ENST00000576708 GPIHBP1Q8IV16 184 aa9.5□□□□□ -0.89
NUP88-212ENST00000576708 EPAS1Q99814 870 aa9.5□□□□□ -0.89
NUP88-212ENST00000576708 MAP3K7O43318 606 aa9.49□□□□□ -0.89
NUP88-212ENST00000576708 EMP3P54852 163 aa9.49□□□□□ -0.89
NUP88-212ENST00000576708 EN1Q05925 392 aaPredicted RBP9.49□□□□□ -0.89
NUP88-212ENST00000576708 ZC3H15Q8WU90 426 aaKnown RBP9.49□□□□□ -0.89
NUP88-212ENST00000576708 ERBB3P21860 1342 aa9.49□□□□□ -0.89
NUP88-212ENST00000576708 PLEKHG1Q9ULL1 1385 aa9.49□□□□□ -0.89
NUP88-212ENST00000576708 TSR1Q2NL82 804 aaKnown RBP9.48□□□□□ -0.89
NUP88-212ENST00000576708 ZDHHC16Q969W1 377 aa9.48□□□□□ -0.89
NUP88-212ENST00000576708 ADAM33Q9BZ11 813 aa9.48□□□□□ -0.89
NUP88-212ENST00000576708 CDHR5Q9HBB8 845 aa9.48□□□□□ -0.89
NUP88-212ENST00000576708 IQGAP3Q86VI3 1631 aa9.48□□□□□ -0.89
NUP88-212ENST00000576708 NWD1Q149M9 1564 aa9.47□□□□□ -0.89
NUP88-212ENST00000576708 POTEB3A0JP26 581 aa9.47□□□□□ -0.89
NUP88-212ENST00000576708 PPP4R3BQ5MIZ7 849 aa9.47□□□□□ -0.89
NUP88-212ENST00000576708 POTEBQ6S5H4 581 aa9.47□□□□□ -0.89
NUP88-212ENST00000576708 FAM135BQ49AJ0 1406 aa9.47□□□□□ -0.89
NUP88-212ENST00000576708 HDGFP51858 240 aaKnown RBP9.46□□□□□ -0.9
NUP88-212ENST00000576708 VARS2Q5ST30 1063 aaKnown RBP9.46□□□□□ -0.9
NUP88-212ENST00000576708 FBXW7Q969H0 707 aa9.46□□□□□ -0.9
NUP88-212ENST00000576708 KRTAP3-3Q9BYR6 98 aa9.46□□□□□ -0.9
NUP88-212ENST00000576708 KRTAP3-2Q9BYR7 98 aa9.46□□□□□ -0.9
NUP88-212ENST00000576708 RGS17Q9UGC6 210 aaPredicted RBP9.46□□□□□ -0.9
NUP88-212ENST00000576708 TBX22Q9Y458 520 aa9.46□□□□□ -0.9
NUP88-212ENST00000576708 ADAMTS13Q76LX8 1427 aa9.46□□□□□ -0.9
NUP88-212ENST00000576708 NKTRP30414 1462 aaKnown RBP9.46□□□□□ -0.9
NUP88-212ENST00000576708 ROBO1Q9Y6N7 1651 aa9.45□□□□□ -0.9
NUP88-212ENST00000576708 FAM205CA6NFA0 338 aa9.45□□□□□ -0.9
NUP88-212ENST00000576708 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms