RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 FBLN1P23142 703 aa18.05■□□□□ 0.48
SCARF1-209ENST00000576012 CYB5RLQ6IPT4 315 aa18.05■□□□□ 0.48
SCARF1-209ENST00000576012 KIF2CQ99661 725 aa18.05■□□□□ 0.48
SCARF1-209ENST00000576012 THUMPD2Q9BTF0 503 aaKnown RBP18.05■□□□□ 0.48
SCARF1-209ENST00000576012 NOL8Q76FK4 1167 aaKnown RBP18.04■□□□□ 0.48
SCARF1-209ENST00000576012 UQCRHLA0A096LP55 91 aa18.04■□□□□ 0.48
SCARF1-209ENST00000576012 UQCRHP07919 91 aa18.04■□□□□ 0.48
SCARF1-209ENST00000576012 PLCH2O75038 1416 aa18.04■□□□□ 0.48
SCARF1-209ENST00000576012 NGEFQ8N5V2 710 aa18.03■□□□□ 0.48
SCARF1-209ENST00000576012 RBSNQ9H1K0 784 aa18.03■□□□□ 0.48
SCARF1-209ENST00000576012 DDIT3P35638 169 aa18.03■□□□□ 0.48
SCARF1-209ENST00000576012 PRIM1P49642 420 aaKnown RBP18.03■□□□□ 0.48
SCARF1-209ENST00000576012 HDAC1Q13547 482 aaPredicted RBP18.03■□□□□ 0.48
SCARF1-209ENST00000576012 RBM25P49756 843 aaKnown RBP18.03■□□□□ 0.48
SCARF1-209ENST00000576012 GGT6Q6P531 493 aa18.03■□□□□ 0.48
SCARF1-209ENST00000576012 TSC1Q92574 1164 aa18.03■□□□□ 0.48
SCARF1-209ENST00000576012 NUCB1Q02818 461 aa18.02■□□□□ 0.48
SCARF1-209ENST00000576012 CABP2Q9NPB3 220 aa18.02■□□□□ 0.48
SCARF1-209ENST00000576012 ZBTB40Q9NUA8 1239 aa18.02■□□□□ 0.47
SCARF1-209ENST00000576012 POLR3AO14802 1390 aaPredicted RBP18.01■□□□□ 0.47
SCARF1-209ENST00000576012 OFD1O75665 1012 aa18.01■□□□□ 0.47
SCARF1-209ENST00000576012 ZHX1Q9UKY1 873 aaPredicted RBP18.01■□□□□ 0.47
SCARF1-209ENST00000576012 TRAPPC8Q9Y2L5 1435 aa18.01■□□□□ 0.47
SCARF1-209ENST00000576012 DNTTIP2Q5QJE6 756 aaKnown RBP18.01■□□□□ 0.47
SCARF1-209ENST00000576012 FAM177BA6PVY3 158 aa18■□□□□ 0.47
SCARF1-209ENST00000576012 AAMPQ13685 434 aa18■□□□□ 0.47
SCARF1-209ENST00000576012 SNX21Q969T3 373 aa18■□□□□ 0.47
SCARF1-209ENST00000576012 TMPOP42166 694 aaKnown RBP18■□□□□ 0.47
SCARF1-209ENST00000576012 ZSCAN23Q3MJ62 389 aa18■□□□□ 0.47
SCARF1-209ENST00000576012 PDZRN4Q6ZMN7 1036 aaPredicted RBP18■□□□□ 0.47
SCARF1-209ENST00000576012 ZGPATQ8N5A5 531 aaKnown RBP18■□□□□ 0.47
SCARF1-209ENST00000576012 STK26Q9P289 416 aa18■□□□□ 0.47
SCARF1-209ENST00000576012 ARHGEF5Q12774 1597 aa18■□□□□ 0.47
SCARF1-209ENST00000576012 PTMAP06454 111 aaKnown RBP17.99■□□□□ 0.47
SCARF1-209ENST00000576012 C16orf71Q8IYS4 520 aaPredicted RBP17.99■□□□□ 0.47
SCARF1-209ENST00000576012 ISY1Q9ULR0 285 aaKnown RBP17.99■□□□□ 0.47
SCARF1-209ENST00000576012 ATAD2Q6PL18 1390 aa17.99■□□□□ 0.47
SCARF1-209ENST00000576012 SYCE3A1L190 88 aa17.99■□□□□ 0.47
SCARF1-209ENST00000576012 CIZ1Q9ULV3 898 aaPredicted RBP17.98■□□□□ 0.47
SCARF1-209ENST00000576012 VIRMAQ69YN4 1812 aaKnown RBP17.97■□□□□ 0.47
SCARF1-209ENST00000576012 KLHL40Q2TBA0 621 aa17.97■□□□□ 0.47
SCARF1-209ENST00000576012 TRIM35Q9UPQ4 493 aa17.97■□□□□ 0.47
SCARF1-209ENST00000576012 NPC1L1Q9UHC9 1359 aa17.97■□□□□ 0.47
SCARF1-209ENST00000576012 EIF2AK4Q9P2K8 1649 aaKnown RBP17.97■□□□□ 0.47
SCARF1-209ENST00000576012 ERVK-7P63135 1459 aa17.96■□□□□ 0.47
SCARF1-209ENST00000576012 PHF23Q9BUL5 403 aaPredicted RBP17.96■□□□□ 0.47
SCARF1-209ENST00000576012 PPP1R9BQ96SB3 815 aa17.96■□□□□ 0.46
SCARF1-209ENST00000576012 NSFL1CQ9UNZ2 370 aaKnown RBP17.96■□□□□ 0.46
SCARF1-209ENST00000576012 SYNMO15061 1565 aa17.95■□□□□ 0.46
SCARF1-209ENST00000576012 IPO8O15397 1037 aaKnown RBP17.95■□□□□ 0.46
SCARF1-209ENST00000576012 ZNF830Q96NB3 372 aaPredicted RBP17.95■□□□□ 0.46
SCARF1-209ENST00000576012 FANCAO15360 1455 aa17.94■□□□□ 0.46
SCARF1-209ENST00000576012 HMOX1P09601 288 aa17.94■□□□□ 0.46
SCARF1-209ENST00000576012 PLCB2Q00722 1185 aa17.94■□□□□ 0.46
SCARF1-209ENST00000576012 BMP2KLQ5H9B9 411 aa17.94■□□□□ 0.46
SCARF1-209ENST00000576012 OTUD7AQ8TE49 926 aaPredicted RBP17.94■□□□□ 0.46
SCARF1-209ENST00000576012 AK9Q5TCS8 1911 aa17.93■□□□□ 0.46
SCARF1-209ENST00000576012 SCAPERQ9BY12 1400 aa17.93■□□□□ 0.46
SCARF1-209ENST00000576012 SRPK2P78362 688 aaKnown RBP17.93■□□□□ 0.46
SCARF1-209ENST00000576012 TSPYL6Q8N831 410 aa17.93■□□□□ 0.46
SCARF1-209ENST00000576012 SMARCA5O60264 1052 aaPredicted RBP17.92■□□□□ 0.46
SCARF1-209ENST00000576012 LMBRD1Q9NUN5 540 aa17.92■□□□□ 0.46
SCARF1-209ENST00000576012 C17orf53Q8N3J3 647 aaPredicted RBP17.91■□□□□ 0.46
SCARF1-209ENST00000576012 GDPD2Q9HCC8 539 aa17.91■□□□□ 0.46
SCARF1-209ENST00000576012 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.91■□□□□ 0.46
SCARF1-209ENST00000576012 KIF16BQ96L93 1317 aa17.91■□□□□ 0.46
SCARF1-209ENST00000576012 ABCC1P33527 1531 aa17.91■□□□□ 0.46
SCARF1-209ENST00000576012 DTNBO60941 627 aa17.91■□□□□ 0.46
SCARF1-209ENST00000576012 GPT2Q8TD30 523 aa17.91■□□□□ 0.46
SCARF1-209ENST00000576012 NCOA3Q9Y6Q9 1424 aa17.9■□□□□ 0.46
SCARF1-209ENST00000576012 CCDC27Q2M243 656 aa17.9■□□□□ 0.46
SCARF1-209ENST00000576012 UGGT1Q9NYU2 1555 aa17.9■□□□□ 0.46
SCARF1-209ENST00000576012 CDC45O75419 566 aa17.89■□□□□ 0.45
SCARF1-209ENST00000576012 GSPT1P15170 499 aaKnown RBP17.89■□□□□ 0.45
SCARF1-209ENST00000576012 SIRT2Q8IXJ6 389 aa17.89■□□□□ 0.45
SCARF1-209ENST00000576012 TMEM63CQ9P1W3 806 aa17.89■□□□□ 0.45
SCARF1-209ENST00000576012 ABCA9Q8IUA7 1624 aa17.89■□□□□ 0.45
SCARF1-209ENST00000576012 CFAP65Q6ZU64 1925 aaKnown RBP17.88■□□□□ 0.45
SCARF1-209ENST00000576012 NOL7Q9UMY1 257 aaKnown RBP17.88■□□□□ 0.45
SCARF1-209ENST00000576012 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.87■□□□□ 0.45
SCARF1-209ENST00000576012 PRDM4Q9UKN5 801 aa17.87■□□□□ 0.45
SCARF1-209ENST00000576012 ADGRL1O94910 1474 aa17.87■□□□□ 0.45
SCARF1-209ENST00000576012 PTPRTO14522 1441 aa17.87■□□□□ 0.45
SCARF1-209ENST00000576012 ZBTB7BO15156 539 aaPredicted RBP17.87■□□□□ 0.45
SCARF1-209ENST00000576012 PTMSP20962 102 aa17.87■□□□□ 0.45
SCARF1-209ENST00000576012 MADDQ8WXG6 1647 aa17.86■□□□□ 0.45
SCARF1-209ENST00000576012 CD109Q6YHK3 1445 aa17.86■□□□□ 0.45
SCARF1-209ENST00000576012 PRKAR2BP31323 418 aa17.86■□□□□ 0.45
SCARF1-209ENST00000576012 TSHZ3Q63HK5 1081 aa17.86■□□□□ 0.45
SCARF1-209ENST00000576012 RIMBP3CA6NJZ7 1639 aa17.86■□□□□ 0.45
SCARF1-209ENST00000576012 RIMBP3BA6NNM3 1639 aa17.86■□□□□ 0.45
SCARF1-209ENST00000576012 RIMBP3Q9UFD9 1639 aa17.86■□□□□ 0.45
SCARF1-209ENST00000576012 ZMYM3Q14202 1370 aa17.86■□□□□ 0.45
SCARF1-209ENST00000576012 LAMC1P11047 1609 aa17.85■□□□□ 0.45
SCARF1-209ENST00000576012 CBX1P83916 185 aa17.85■□□□□ 0.45
SCARF1-209ENST00000576012 ZKSCAN5Q9Y2L8 839 aa17.85■□□□□ 0.45
SCARF1-209ENST00000576012 ATP10AO60312 1499 aa17.85■□□□□ 0.45
SCARF1-209ENST00000576012 IGSF3O75054 1194 aa17.85■□□□□ 0.45
SCARF1-209ENST00000576012 PPIP5K1Q6PFW1 1433 aa17.85■□□□□ 0.45
SCARF1-209ENST00000576012 NUCB2P80303 420 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms