RNA–Protein interactions for RNA: ENST00000575261.5

TVP23B-208, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 697 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-208ENST00000575261 FAM83GA6ND36 823 aa15.25■□□□□ 0.03
TVP23B-208ENST00000575261 NGDNQ8NEJ9 315 aaKnown RBP15.25■□□□□ 0.03
TVP23B-208ENST00000575261 TOPAZ1Q8N9V7 1692 aa15.25■□□□□ 0.03
TVP23B-208ENST00000575261 ONECUT3O60422 494 aaPredicted RBP15.24■□□□□ 0.03
TVP23B-208ENST00000575261 SF3B2Q13435 895 aaKnown RBP15.24■□□□□ 0.03
TVP23B-208ENST00000575261 A0A0G2JS52 829 aa15.23■□□□□ 0.03
TVP23B-208ENST00000575261 MYT1Q01538 1121 aa15.23■□□□□ 0.03
TVP23B-208ENST00000575261 KRT27Q7Z3Y8 459 aa15.23■□□□□ 0.03
TVP23B-208ENST00000575261 BTG4Q9NY30 223 aa15.23■□□□□ 0.03
TVP23B-208ENST00000575261 PHRF1Q9P1Y6 1649 aaKnown RBP15.23■□□□□ 0.03
TVP23B-208ENST00000575261 PAK3O75914 559 aaPredicted RBP15.22■□□□□ 0.03
TVP23B-208ENST00000575261 FAM98CQ17RN3 349 aaKnown RBP15.2■□□□□ 0.02
TVP23B-208ENST00000575261 DEFB132Q7Z7B7 95 aa15.2■□□□□ 0.02
TVP23B-208ENST00000575261 NUDT16Q96DE0 195 aaKnown RBP15.2■□□□□ 0.02
TVP23B-208ENST00000575261 THSD7AQ9UPZ6 1657 aa15.19■□□□□ 0.02
TVP23B-208ENST00000575261 PRDM11Q9NQV5 511 aa15.19■□□□□ 0.02
TVP23B-208ENST00000575261 POLR3AO14802 1390 aaPredicted RBP15.19■□□□□ 0.02
TVP23B-208ENST00000575261 RGPD1P0DJD0 1748 aa15.18■□□□□ 0.02
TVP23B-208ENST00000575261 SPATA31A5Q5VU36 1347 aa15.17■□□□□ 0.02
TVP23B-208ENST00000575261 SPATA31A7Q8IWB4 1347 aa15.17■□□□□ 0.02
TVP23B-208ENST00000575261 KIAA0232Q92628 1395 aa15.17■□□□□ 0.02
TVP23B-208ENST00000575261 CDK19Q9BWU1 502 aa15.17■□□□□ 0.02
TVP23B-208ENST00000575261 NRKQ7Z2Y5 1582 aa15.16■□□□□ 0.02
TVP23B-208ENST00000575261 CCDC61Q9Y6R9 512 aa15.16■□□□□ 0.02
TVP23B-208ENST00000575261 BAG6P46379 1132 aa15.15■□□□□ 0.02
TVP23B-208ENST00000575261 ACEP12821 1306 aa15.15■□□□□ 0.02
TVP23B-208ENST00000575261 QRICH2Q9H0J4 1663 aa15.14■□□□□ 0.01
TVP23B-208ENST00000575261 TNS1Q9HBL0 1735 aaKnown RBP15.14■□□□□ 0.01
TVP23B-208ENST00000575261 LRP5O75197 1615 aa15.14■□□□□ 0.01
TVP23B-208ENST00000575261 SPATA31A1Q5TZJ5 1347 aa15.13■□□□□ 0.01
TVP23B-208ENST00000575261 PPIP5K1Q6PFW1 1433 aa15.12■□□□□ 0.01
TVP23B-208ENST00000575261 PLEKHG3A1L390 1219 aa15.12■□□□□ 0.01
TVP23B-208ENST00000575261 CHRNA2Q15822 529 aa15.12■□□□□ 0.01
TVP23B-208ENST00000575261 NBPF1Q3BBV0 1214 aa15.12■□□□□ 0.01
TVP23B-208ENST00000575261 NBPF8Q3BBV2 869 aa15.12■□□□□ 0.01
TVP23B-208ENST00000575261 CENPJQ9HC77 1338 aaPredicted RBP15.12■□□□□ 0.01
TVP23B-208ENST00000575261 DISP2A7MBM2 1401 aa15.11■□□□□ 0.01
TVP23B-208ENST00000575261 ZC3H6P61129 1189 aaKnown RBP15.11■□□□□ 0.01
TVP23B-208ENST00000575261 NUTM2GQ5VZR2 741 aa15.11■□□□□ 0.01
TVP23B-208ENST00000575261 STRN4Q9NRL3 753 aa15.11■□□□□ 0.01
TVP23B-208ENST00000575261 LMO7Q8WWI1 1683 aa15.11■□□□□ 0.01
TVP23B-208ENST00000575261 SSH2Q76I76 1423 aa15.1■□□□□ 0.01
TVP23B-208ENST00000575261 SRPK2P78362 688 aaKnown RBP15.1■□□□□ 0.01
TVP23B-208ENST00000575261 ABTB2Q8N961 1025 aa15.1■□□□□ 0.01
TVP23B-208ENST00000575261 USP19O94966 1318 aa15.1■□□□□ 0.01
TVP23B-208ENST00000575261 CPDO75976 1380 aa15.1■□□□□ 0.01
TVP23B-208ENST00000575261 FAM182BQ5T319 152 aa15.09■□□□□ 0.01
TVP23B-208ENST00000575261 BRD4O60885 1362 aaPredicted RBP15.09■□□□□ 0.01
TVP23B-208ENST00000575261 CAMTA1Q9Y6Y1 1673 aa15.08■□□□□ 0
TVP23B-208ENST00000575261 TRPM1Q7Z4N2 1603 aa15.07■□□□□ 0
TVP23B-208ENST00000575261 EVA1CP58658 441 aa15.07■□□□□ 0
TVP23B-208ENST00000575261 EN1Q05925 392 aaPredicted RBP15.07■□□□□ 0
TVP23B-208ENST00000575261 BARGINQ6ZT62 677 aa15.06■□□□□ 0
TVP23B-208ENST00000575261 NLRP13Q86W25 1043 aa15.06■□□□□ 0
TVP23B-208ENST00000575261 CABP2Q9NPB3 220 aa15.06■□□□□ 0
TVP23B-208ENST00000575261 USP35Q9P2H5 1018 aa15.06■□□□□ 0
TVP23B-208ENST00000575261 USP6P35125 1406 aa15.06■□□□□ 0
TVP23B-208ENST00000575261 PSDA5PKW4 1024 aaPredicted RBP15.05■□□□□ -0
TVP23B-208ENST00000575261 FAM196AQ6ZSG2 479 aa15.05■□□□□ -0
TVP23B-208ENST00000575261 COL5A2P05997 1499 aaPredicted RBP15.05■□□□□ -0
TVP23B-208ENST00000575261 PARP4Q9UKK3 1724 aaKnown RBP15.04■□□□□ -0
TVP23B-208ENST00000575261 SLIT3O75094 1523 aa15.04■□□□□ -0
TVP23B-208ENST00000575261 PARD3Q8TEW0 1356 aa15.04■□□□□ -0
TVP23B-208ENST00000575261 LARP1Q6PKG0 1096 aaKnown RBP15.04■□□□□ -0
TVP23B-208ENST00000575261 PIK3C2AO00443 1686 aa15.03■□□□□ -0
TVP23B-208ENST00000575261 GCP02774 474 aa15.03■□□□□ -0
TVP23B-208ENST00000575261 TCP11L2Q8N4U5 519 aa15.03■□□□□ -0
TVP23B-208ENST00000575261 L3MBTL2Q969R5 705 aa15.03■□□□□ -0
TVP23B-208ENST00000575261 TRIM37O94972 964 aa15.02■□□□□ -0
TVP23B-208ENST00000575261 PDE3BQ13370 1112 aa15.02■□□□□ -0
TVP23B-208ENST00000575261 THRAP3Q9Y2W1 955 aaKnown RBP15.02■□□□□ -0
TVP23B-208ENST00000575261 RREB1Q92766 1687 aa15.02□□□□□ -0.01
TVP23B-208ENST00000575261 ROCK2O75116 1388 aaKnown RBP15.01□□□□□ -0.01
TVP23B-208ENST00000575261 EVC2Q86UK5 1308 aa15.01□□□□□ -0.01
TVP23B-208ENST00000575261 EZH2Q15910 746 aaKnown RBP15.01□□□□□ -0.01
TVP23B-208ENST00000575261 CABP1Q9NZU7 370 aa15.01□□□□□ -0.01
TVP23B-208ENST00000575261 CRB1P82279 1406 aa15□□□□□ -0.01
TVP23B-208ENST00000575261 R3HDM1Q15032 1099 aaKnown RBP15□□□□□ -0.01
TVP23B-208ENST00000575261 AKAP12Q02952 1782 aa15□□□□□ -0.01
TVP23B-208ENST00000575261 LRRC37A3O60309 1634 aa14.99□□□□□ -0.01
TVP23B-208ENST00000575261 AATKQ6ZMQ8 1374 aa14.99□□□□□ -0.01
TVP23B-208ENST00000575261 APBA3O96018 575 aa14.99□□□□□ -0.01
TVP23B-208ENST00000575261 NLRP6P59044 892 aa14.99□□□□□ -0.01
TVP23B-208ENST00000575261 CAMKK2Q96RR4 588 aa14.99□□□□□ -0.01
TVP23B-208ENST00000575261 NUP188Q5SRE5 1749 aa14.99□□□□□ -0.01
TVP23B-208ENST00000575261 WNK3Q9BYP7 1800 aa14.99□□□□□ -0.01
TVP23B-208ENST00000575261 ZBTB7CA1YPR0 619 aa14.98□□□□□ -0.01
TVP23B-208ENST00000575261 SIN3AQ96ST3 1273 aa14.97□□□□□ -0.01
TVP23B-208ENST00000575261 COL18A1P39060 1754 aa14.97□□□□□ -0.01
TVP23B-208ENST00000575261 OVOS2A0A0G2JMS6 1433 aa14.97□□□□□ -0.01
TVP23B-208ENST00000575261 OVOS2A0A0J9YW53 1432 aa14.97□□□□□ -0.01
TVP23B-208ENST00000575261 CPSF1Q10570 1443 aaKnown RBP14.97□□□□□ -0.01
TVP23B-208ENST00000575261 OVOS2Q6IE36 1432 aa14.97□□□□□ -0.01
TVP23B-208ENST00000575261 C11orf95C9JLR9 678 aaPredicted RBP14.96□□□□□ -0.01
TVP23B-208ENST00000575261 PEAK1Q9H792 1746 aa14.96□□□□□ -0.01
TVP23B-208ENST00000575261 RGPD3A6NKT7 1758 aaPredicted RBP14.96□□□□□ -0.02
TVP23B-208ENST00000575261 RGPD4Q7Z3J3 1758 aa14.96□□□□□ -0.02
TVP23B-208ENST00000575261 ZNF692Q9BU19 519 aaPredicted RBP14.95□□□□□ -0.02
TVP23B-208ENST00000575261 MON2Q7Z3U7 1717 aa14.95□□□□□ -0.02
TVP23B-208ENST00000575261 NEUROD1Q13562 356 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms