RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 SULT6B1Q6IMI4 303 aa10.67□□□□□ -0.7
RPAIN-215ENST00000575112 PHACTR3Q96KR7 559 aa10.67□□□□□ -0.7
RPAIN-215ENST00000575112 AMPHP49418 695 aa10.67□□□□□ -0.7
RPAIN-215ENST00000575112 XPCQ01831 940 aaPredicted RBP10.67□□□□□ -0.7
RPAIN-215ENST00000575112 ZNF692Q9BU19 519 aaPredicted RBP10.67□□□□□ -0.7
RPAIN-215ENST00000575112 L1TD1Q5T7N2 865 aaKnown RBP10.66□□□□□ -0.7
RPAIN-215ENST00000575112 IPO8O15397 1037 aaKnown RBP10.66□□□□□ -0.7
RPAIN-215ENST00000575112 TTC37Q6PGP7 1564 aa10.66□□□□□ -0.7
RPAIN-215ENST00000575112 TRIM27P14373 513 aa10.66□□□□□ -0.7
RPAIN-215ENST00000575112 EIF2S2P20042 333 aaKnown RBP10.66□□□□□ -0.7
RPAIN-215ENST00000575112 CHAMP1Q96JM3 812 aa10.66□□□□□ -0.7
RPAIN-215ENST00000575112 ARID3AQ99856 593 aa10.66□□□□□ -0.7
RPAIN-215ENST00000575112 TSPYL6Q8N831 410 aa10.65□□□□□ -0.7
RPAIN-215ENST00000575112 GRPEL1Q9HAV7 217 aa10.65□□□□□ -0.7
RPAIN-215ENST00000575112 CCDC9Q9Y3X0 531 aaKnown RBP10.65□□□□□ -0.7
RPAIN-215ENST00000575112 RTF1Q92541 710 aaKnown RBP10.65□□□□□ -0.71
RPAIN-215ENST00000575112 MADDQ8WXG6 1647 aa10.64□□□□□ -0.71
RPAIN-215ENST00000575112 CLCN1P35523 988 aa10.64□□□□□ -0.71
RPAIN-215ENST00000575112 HSP90AA2PQ14568 343 aaPredicted RBP10.64□□□□□ -0.71
RPAIN-215ENST00000575112 AEBP1Q8IUX7 1158 aa10.64□□□□□ -0.71
RPAIN-215ENST00000575112 RNF17Q9BXT8 1623 aaKnown RBP10.64□□□□□ -0.71
RPAIN-215ENST00000575112 HSCBQ8IWL3 235 aa10.64□□□□□ -0.71
RPAIN-215ENST00000575112 TNPO1Q92973 898 aaKnown RBP10.64□□□□□ -0.71
RPAIN-215ENST00000575112 IQGAP1P46940 1657 aa10.64□□□□□ -0.71
RPAIN-215ENST00000575112 CLASP1Q7Z460 1538 aa10.63□□□□□ -0.71
RPAIN-215ENST00000575112 NGEFQ8N5V2 710 aa10.63□□□□□ -0.71
RPAIN-215ENST00000575112 ERVK-7P63135 1459 aa10.63□□□□□ -0.71
RPAIN-215ENST00000575112 ARHGEF5Q12774 1597 aa10.63□□□□□ -0.71
RPAIN-215ENST00000575112 MVPQ14764 893 aaKnown RBP10.63□□□□□ -0.71
RPAIN-215ENST00000575112 ATAD2Q6PL18 1390 aa10.63□□□□□ -0.71
RPAIN-215ENST00000575112 ABCC2Q92887 1545 aa10.63□□□□□ -0.71
RPAIN-215ENST00000575112 SMARCA5O60264 1052 aaPredicted RBP10.63□□□□□ -0.71
RPAIN-215ENST00000575112 ATF7IPQ6VMQ6 1270 aa10.63□□□□□ -0.71
RPAIN-215ENST00000575112 USHBP1Q8N6Y0 703 aa10.63□□□□□ -0.71
RPAIN-215ENST00000575112 LAMC1P11047 1609 aa10.63□□□□□ -0.71
RPAIN-215ENST00000575112 SYNMO15061 1565 aa10.62□□□□□ -0.71
RPAIN-215ENST00000575112 ESPNB1AK53 854 aa10.62□□□□□ -0.71
RPAIN-215ENST00000575112 CHMP5Q9NZZ3 219 aa10.62□□□□□ -0.71
RPAIN-215ENST00000575112 DTNBO60941 627 aa10.62□□□□□ -0.71
RPAIN-215ENST00000575112 TSHZ3Q63HK5 1081 aa10.62□□□□□ -0.71
RPAIN-215ENST00000575112 UNC13BO14795 1591 aa10.62□□□□□ -0.71
RPAIN-215ENST00000575112 F6X3S4 739 aa10.62□□□□□ -0.71
RPAIN-215ENST00000575112 CEP152O94986 1710 aa10.61□□□□□ -0.71
RPAIN-215ENST00000575112 TWISTNBQ3B726 338 aaPredicted RBP10.61□□□□□ -0.71
RPAIN-215ENST00000575112 NUDT16Q96DE0 195 aaKnown RBP10.61□□□□□ -0.71
RPAIN-215ENST00000575112 EIF2AK4Q9P2K8 1649 aaKnown RBP10.61□□□□□ -0.71
RPAIN-215ENST00000575112 DDX19BQ9UMR2 479 aa10.61□□□□□ -0.71
RPAIN-215ENST00000575112 IQGAP3Q86VI3 1631 aa10.61□□□□□ -0.71
RPAIN-215ENST00000575112 DUOX2Q9NRD8 1548 aa10.61□□□□□ -0.71
RPAIN-215ENST00000575112 RBM10P98175 930 aaKnown RBP10.61□□□□□ -0.71
RPAIN-215ENST00000575112 TRIM6-TRIM34B2RNG4 842 aa10.6□□□□□ -0.71
RPAIN-215ENST00000575112 PREX2Q70Z35 1606 aa10.6□□□□□ -0.71
RPAIN-215ENST00000575112 ATP10AO60312 1499 aa10.6□□□□□ -0.71
RPAIN-215ENST00000575112 NLRP6P59044 892 aa10.6□□□□□ -0.71
RPAIN-215ENST00000575112 SHPRHQ149N8 1683 aa10.6□□□□□ -0.71
RPAIN-215ENST00000575112 FOXO3O43524 673 aa10.6□□□□□ -0.71
RPAIN-215ENST00000575112 RILPL2Q969X0 211 aa10.6□□□□□ -0.71
RPAIN-215ENST00000575112 KIF2CQ99661 725 aa10.6□□□□□ -0.71
RPAIN-215ENST00000575112 SSFA2P28290 1259 aa10.59□□□□□ -0.71
RPAIN-215ENST00000575112 HSP90AB2PQ58FF8 381 aa10.59□□□□□ -0.71
RPAIN-215ENST00000575112 OS9Q13438 667 aaPredicted RBP10.59□□□□□ -0.71
RPAIN-215ENST00000575112 PKP1Q13835 747 aa10.59□□□□□ -0.71
RPAIN-215ENST00000575112 C16orf71Q8IYS4 520 aaPredicted RBP10.59□□□□□ -0.71
RPAIN-215ENST00000575112 CLTCL1P53675 1640 aa10.59□□□□□ -0.71
RPAIN-215ENST00000575112 MRE11P49959 708 aa10.59□□□□□ -0.71
RPAIN-215ENST00000575112 WDR63Q8IWG1 891 aa10.59□□□□□ -0.71
RPAIN-215ENST00000575112 SLC52A1Q9NWF4 448 aa10.59□□□□□ -0.71
RPAIN-215ENST00000575112 ZNF330Q9Y3S2 320 aaPredicted RBP10.59□□□□□ -0.71
RPAIN-215ENST00000575112 STAC3Q96MF2 364 aa10.58□□□□□ -0.72
RPAIN-215ENST00000575112 MAP4K4O95819 1239 aaPredicted RBP10.58□□□□□ -0.72
RPAIN-215ENST00000575112 C8orf58Q8NAV2 365 aa10.58□□□□□ -0.72
RPAIN-215ENST00000575112 PHF23Q9BUL5 403 aaPredicted RBP10.58□□□□□ -0.72
RPAIN-215ENST00000575112 POLKQ9UBT6 870 aa10.58□□□□□ -0.72
RPAIN-215ENST00000575112 SLC4A2P04920 1241 aa10.58□□□□□ -0.72
RPAIN-215ENST00000575112 DDIT3P35638 169 aa10.58□□□□□ -0.72
RPAIN-215ENST00000575112 MAST1Q9Y2H9 1570 aa10.57□□□□□ -0.72
RPAIN-215ENST00000575112 A0A1W2PP64 1363 aa10.57□□□□□ -0.72
RPAIN-215ENST00000575112 KDM5AP29375 1690 aaKnown RBP10.57□□□□□ -0.72
RPAIN-215ENST00000575112 GAS2L2Q8NHY3 880 aa10.57□□□□□ -0.72
RPAIN-215ENST00000575112 TSPYL4Q9UJ04 414 aa10.57□□□□□ -0.72
RPAIN-215ENST00000575112 FKBP5Q13451 457 aaPredicted RBP10.57□□□□□ -0.72
RPAIN-215ENST00000575112 ANXA1P04083 346 aa10.56□□□□□ -0.72
RPAIN-215ENST00000575112 TRIM35Q9UPQ4 493 aa10.56□□□□□ -0.72
RPAIN-215ENST00000575112 PLCB2Q00722 1185 aa10.56□□□□□ -0.72
RPAIN-215ENST00000575112 POLR3AO14802 1390 aaPredicted RBP10.56□□□□□ -0.72
RPAIN-215ENST00000575112 JARID2Q92833 1246 aaPredicted RBP10.56□□□□□ -0.72
RPAIN-215ENST00000575112 MPNDQ8N594 471 aa10.55□□□□□ -0.72
RPAIN-215ENST00000575112 MBIPQ9NS73 344 aa10.55□□□□□ -0.72
RPAIN-215ENST00000575112 IQSEC2Q5JU85 1478 aa10.55□□□□□ -0.72
RPAIN-215ENST00000575112 EXOC6BQ9Y2D4 811 aa10.55□□□□□ -0.72
RPAIN-215ENST00000575112 EID1Q9Y6B2 187 aa10.55□□□□□ -0.72
RPAIN-215ENST00000575112 KIAA1211Q6ZU35 1233 aa10.55□□□□□ -0.72
RPAIN-215ENST00000575112 TRIM44Q96DX7 344 aaPredicted RBP10.55□□□□□ -0.72
RPAIN-215ENST00000575112 LARP6Q9BRS8 491 aaKnown RBP10.55□□□□□ -0.72
RPAIN-215ENST00000575112 SPHKAPQ2M3C7 1700 aa10.54□□□□□ -0.72
RPAIN-215ENST00000575112 NPC1L1Q9UHC9 1359 aa10.54□□□□□ -0.72
RPAIN-215ENST00000575112 GNAI1P63096 354 aa10.54□□□□□ -0.72
RPAIN-215ENST00000575112 AIMP1Q12904 312 aaKnown RBP10.54□□□□□ -0.72
RPAIN-215ENST00000575112 STK31Q9BXU1 1019 aa10.54□□□□□ -0.72
RPAIN-215ENST00000575112 CCDC61Q9Y6R9 512 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms