RNA–Protein interactions for RNA: ENST00000574744.1

TOM1L1-219, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 3

Gene TOM1L1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-219ENST00000574744 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.48□□□□□ -0.41
TOM1L1-219ENST00000574744 TOPAZ1Q8N9V7 1692 aa12.48□□□□□ -0.41
TOM1L1-219ENST00000574744 CPSF1Q10570 1443 aaKnown RBP12.48□□□□□ -0.41
TOM1L1-219ENST00000574744 CNGB1Q14028 1251 aaPredicted RBP12.48□□□□□ -0.41
TOM1L1-219ENST00000574744 CHD2O14647 1828 aaKnown RBP12.47□□□□□ -0.41
TOM1L1-219ENST00000574744 KIF20BQ96Q89 1820 aa12.47□□□□□ -0.41
TOM1L1-219ENST00000574744 AKAP12Q02952 1782 aa12.47□□□□□ -0.41
TOM1L1-219ENST00000574744 MON2Q7Z3U7 1717 aa12.47□□□□□ -0.41
TOM1L1-219ENST00000574744 EDC4Q6P2E9 1401 aaKnown RBP12.46□□□□□ -0.41
TOM1L1-219ENST00000574744 MORC1Q86VD1 984 aa12.46□□□□□ -0.41
TOM1L1-219ENST00000574744 CLEC11AQ9Y240 323 aa12.46□□□□□ -0.41
TOM1L1-219ENST00000574744 AMOTL2Q9Y2J4 779 aa12.46□□□□□ -0.41
TOM1L1-219ENST00000574744 CCDC61Q9Y6R9 512 aa12.46□□□□□ -0.41
TOM1L1-219ENST00000574744 PPIP5K1Q6PFW1 1433 aa12.45□□□□□ -0.42
TOM1L1-219ENST00000574744 ITSN1Q15811 1721 aa12.45□□□□□ -0.42
TOM1L1-219ENST00000574744 PITPNM1O00562 1244 aa12.45□□□□□ -0.42
TOM1L1-219ENST00000574744 ANKARQ7Z5J8 1434 aa12.45□□□□□ -0.42
TOM1L1-219ENST00000574744 SMG6Q86US8 1419 aaKnown RBP12.45□□□□□ -0.42
TOM1L1-219ENST00000574744 PDE3BQ13370 1112 aa12.44□□□□□ -0.42
TOM1L1-219ENST00000574744 NGEFQ8N5V2 710 aa12.44□□□□□ -0.42
TOM1L1-219ENST00000574744 NUDT16Q96DE0 195 aaKnown RBP12.44□□□□□ -0.42
TOM1L1-219ENST00000574744 SLC26A8Q96RN1 970 aa12.44□□□□□ -0.42
TOM1L1-219ENST00000574744 CABP1Q9NZU7 370 aa12.44□□□□□ -0.42
TOM1L1-219ENST00000574744 NPHP4O75161 1426 aaPredicted RBP12.44□□□□□ -0.42
TOM1L1-219ENST00000574744 NWD1Q149M9 1564 aa12.43□□□□□ -0.42
TOM1L1-219ENST00000574744 WDR43Q15061 677 aaKnown RBP eCLIP12.43□□□□□ -0.42
TOM1L1-219ENST00000574744 PLEKHG3A1L390 1219 aa12.42□□□□□ -0.42
TOM1L1-219ENST00000574744 RTN4Q9NQC3 1192 aaKnown RBP12.42□□□□□ -0.42
TOM1L1-219ENST00000574744 CFAP53Q96M91 514 aa12.41□□□□□ -0.42
TOM1L1-219ENST00000574744 SHPRHQ149N8 1683 aa12.41□□□□□ -0.42
TOM1L1-219ENST00000574744 FMN2Q9NZ56 1722 aa12.4□□□□□ -0.42
TOM1L1-219ENST00000574744 NRKQ7Z2Y5 1582 aa12.4□□□□□ -0.42
TOM1L1-219ENST00000574744 FYB1O15117 783 aa12.4□□□□□ -0.42
TOM1L1-219ENST00000574744 NUDCQ9Y266 331 aa12.4□□□□□ -0.42
TOM1L1-219ENST00000574744 PRR36Q9H6K5 1346 aa12.39□□□□□ -0.43
TOM1L1-219ENST00000574744 PRR29P0C7W0 189 aa12.39□□□□□ -0.43
TOM1L1-219ENST00000574744 ADAMTS8Q9UP79 889 aa12.39□□□□□ -0.43
TOM1L1-219ENST00000574744 PLCD3Q8N3E9 789 aa12.38□□□□□ -0.43
TOM1L1-219ENST00000574744 AATKQ6ZMQ8 1374 aa12.38□□□□□ -0.43
TOM1L1-219ENST00000574744 NKTRP30414 1462 aaKnown RBP12.38□□□□□ -0.43
TOM1L1-219ENST00000574744 NEFLP07196 543 aa12.37□□□□□ -0.43
TOM1L1-219ENST00000574744 KCNA6P17658 529 aa12.37□□□□□ -0.43
TOM1L1-219ENST00000574744 ERICH6BQ5W0A0 696 aa12.37□□□□□ -0.43
TOM1L1-219ENST00000574744 PNPLA6Q8IY17 1366 aa12.37□□□□□ -0.43
TOM1L1-219ENST00000574744 COL3A1P02461 1466 aaPredicted RBP12.37□□□□□ -0.43
TOM1L1-219ENST00000574744 LRRC7Q96NW7 1537 aa12.37□□□□□ -0.43
TOM1L1-219ENST00000574744 ADGRL3Q9HAR2 1447 aa12.37□□□□□ -0.43
TOM1L1-219ENST00000574744 MTHFSP49914 203 aa12.36□□□□□ -0.43
TOM1L1-219ENST00000574744 NALCNQ8IZF0 1738 aa12.36□□□□□ -0.43
TOM1L1-219ENST00000574744 USP6P35125 1406 aa12.36□□□□□ -0.43
TOM1L1-219ENST00000574744 SSH2Q76I76 1423 aa12.36□□□□□ -0.43
TOM1L1-219ENST00000574744 GGNBP2Q9H3C7 697 aa12.35□□□□□ -0.43
TOM1L1-219ENST00000574744 USP54Q70EL1 1684 aa12.35□□□□□ -0.43
TOM1L1-219ENST00000574744 TTC21AQ8NDW8 1320 aa12.35□□□□□ -0.43
TOM1L1-219ENST00000574744 NCOA3Q9Y6Q9 1424 aa12.34□□□□□ -0.43
TOM1L1-219ENST00000574744 ZNF521Q96K83 1311 aa12.34□□□□□ -0.43
TOM1L1-219ENST00000574744 CDK12Q9NYV4 1490 aaPredicted RBP12.34□□□□□ -0.43
TOM1L1-219ENST00000574744 CREBZFQ9NS37 354 aa12.33□□□□□ -0.44
TOM1L1-219ENST00000574744 OVOS2A0A0J9YW53 1432 aa12.33□□□□□ -0.44
TOM1L1-219ENST00000574744 OVOS2Q6IE36 1432 aa12.33□□□□□ -0.44
TOM1L1-219ENST00000574744 ACEP12821 1306 aa12.33□□□□□ -0.44
TOM1L1-219ENST00000574744 RNF123Q5XPI4 1314 aa12.33□□□□□ -0.44
TOM1L1-219ENST00000574744 TTC21BQ7Z4L5 1316 aa12.33□□□□□ -0.44
TOM1L1-219ENST00000574744 SUPT16HQ9Y5B9 1047 aaKnown RBP12.32□□□□□ -0.44
TOM1L1-219ENST00000574744 IQSEC2Q5JU85 1478 aa12.32□□□□□ -0.44
TOM1L1-219ENST00000574744 USP31Q70CQ4 1352 aa12.31□□□□□ -0.44
TOM1L1-219ENST00000574744 KLHL34Q8N239 644 aa12.31□□□□□ -0.44
TOM1L1-219ENST00000574744 RUNDC1Q96C34 613 aa12.31□□□□□ -0.44
TOM1L1-219ENST00000574744 COG3Q96JB2 828 aa12.31□□□□□ -0.44
TOM1L1-219ENST00000574744 MAP2P11137 1827 aaKnown RBP12.3□□□□□ -0.44
TOM1L1-219ENST00000574744 TNNT2P45379 298 aaPredicted RBP12.3□□□□□ -0.44
TOM1L1-219ENST00000574744 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.3□□□□□ -0.44
TOM1L1-219ENST00000574744 PNNQ9H307 717 aaKnown RBP12.3□□□□□ -0.44
TOM1L1-219ENST00000574744 RGPD8O14715 1765 aaPredicted RBP12.3□□□□□ -0.44
TOM1L1-219ENST00000574744 CCDC27Q2M243 656 aa12.29□□□□□ -0.44
TOM1L1-219ENST00000574744 POLKQ9UBT6 870 aa12.29□□□□□ -0.44
TOM1L1-219ENST00000574744 NCKAP5LQ9HCH0 1330 aa12.29□□□□□ -0.44
TOM1L1-219ENST00000574744 DCCP43146 1447 aa12.28□□□□□ -0.44
TOM1L1-219ENST00000574744 NME9Q86XW9 330 aa12.28□□□□□ -0.44
TOM1L1-219ENST00000574744 DIAPH1O60610 1272 aaKnown RBP12.27□□□□□ -0.45
TOM1L1-219ENST00000574744 GOLGA2Q08379 1002 aa12.27□□□□□ -0.45
TOM1L1-219ENST00000574744 KIF24Q5T7B8 1368 aa12.27□□□□□ -0.45
TOM1L1-219ENST00000574744 LMTK3Q96Q04 1460 aa12.27□□□□□ -0.45
TOM1L1-219ENST00000574744 KIF1AQ12756 1690 aa12.26□□□□□ -0.45
TOM1L1-219ENST00000574744 APAF1O14727 1248 aa12.26□□□□□ -0.45
TOM1L1-219ENST00000574744 MNX1P50219 401 aaPredicted RBP12.26□□□□□ -0.45
TOM1L1-219ENST00000574744 NGDNQ8NEJ9 315 aaKnown RBP12.26□□□□□ -0.45
TOM1L1-219ENST00000574744 PIK3C2AO00443 1686 aa12.26□□□□□ -0.45
TOM1L1-219ENST00000574744 PLEKHG5O94827 1062 aa12.25□□□□□ -0.45
TOM1L1-219ENST00000574744 TRMT2AQ8IZ69 625 aaKnown RBP12.25□□□□□ -0.45
TOM1L1-219ENST00000574744 SPOCK2Q92563 424 aa12.25□□□□□ -0.45
TOM1L1-219ENST00000574744 KDM4FA0A1W2PPD8 638 aa12.24□□□□□ -0.45
TOM1L1-219ENST00000574744 E9PSI1 815 aa12.24□□□□□ -0.45
TOM1L1-219ENST00000574744 FCHSD2O94868 740 aa12.24□□□□□ -0.45
TOM1L1-219ENST00000574744 U2AF1L5P0DN76 240 aaPredicted RBP12.24□□□□□ -0.45
TOM1L1-219ENST00000574744 U2AF1Q01081 240 aaKnown RBP eCLIP12.24□□□□□ -0.45
TOM1L1-219ENST00000574744 PHF8Q9UPP1 1060 aa12.24□□□□□ -0.45
TOM1L1-219ENST00000574744 SLFN5Q08AF3 891 aa12.23□□□□□ -0.45
TOM1L1-219ENST00000574744 CHRDL2Q6WN34 429 aa12.23□□□□□ -0.45
TOM1L1-219ENST00000574744 WDR63Q8IWG1 891 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms