RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-215ENST00000574095 CABP2Q9NPB3 220 aa37.31■■■■□ 3.56
NPLOC4-215ENST00000574095 ACEP12821 1306 aa37.31■■■■□ 3.56
NPLOC4-215ENST00000574095 PLEKHG3A1L390 1219 aa37.29■■■■□ 3.56
NPLOC4-215ENST00000574095 POLR3AO14802 1390 aaPredicted RBP37.28■■■■□ 3.56
NPLOC4-215ENST00000574095 PLCH1Q4KWH8 1693 aa37.27■■■■□ 3.56
NPLOC4-215ENST00000574095 FAM83GA6ND36 823 aa37.26■■■■□ 3.56
NPLOC4-215ENST00000574095 PPIP5K1Q6PFW1 1433 aa37.23■■■■□ 3.55
NPLOC4-215ENST00000574095 TONSLQ96HA7 1378 aa37.23■■■■□ 3.55
NPLOC4-215ENST00000574095 NWD2Q9ULI1 1742 aa37.22■■■■□ 3.55
NPLOC4-215ENST00000574095 CRYBG1Q9Y4K1 1723 aa37.22■■■■□ 3.55
NPLOC4-215ENST00000574095 RALGAPBQ86X10 1494 aa37.2■■■■□ 3.55
NPLOC4-215ENST00000574095 GLI3P10071 1580 aa37.2■■■■□ 3.55
NPLOC4-215ENST00000574095 NUTM2GQ5VZR2 741 aa37.19■■■■□ 3.54
NPLOC4-215ENST00000574095 EVC2Q86UK5 1308 aa37.17■■■■□ 3.54
NPLOC4-215ENST00000574095 VPS72Q15906 364 aa37.17■■■■□ 3.54
NPLOC4-215ENST00000574095 BTG4Q9NY30 223 aa37.15■■■■□ 3.54
NPLOC4-215ENST00000574095 CABP1Q9NZU7 370 aa37.15■■■■□ 3.54
NPLOC4-215ENST00000574095 CCDC9Q9Y3X0 531 aaKnown RBP37.15■■■■□ 3.54
NPLOC4-215ENST00000574095 COL14A1Q05707 1796 aaKnown RBP37.14■■■■□ 3.54
NPLOC4-215ENST00000574095 ATAD2Q6PL18 1390 aa37.13■■■■□ 3.53
NPLOC4-215ENST00000574095 ABTB2Q8N961 1025 aa37.12■■■■□ 3.53
NPLOC4-215ENST00000574095 CARD11Q9BXL7 1154 aa37.12■■■■□ 3.53
NPLOC4-215ENST00000574095 PHRF1Q9P1Y6 1649 aaKnown RBP37.1■■■■□ 3.53
NPLOC4-215ENST00000574095 NRAPQ86VF7 1730 aa37.1■■■■□ 3.53
NPLOC4-215ENST00000574095 PRDM11Q9NQV5 511 aa37.09■■■■□ 3.53
NPLOC4-215ENST00000574095 ZC3H6P61129 1189 aaKnown RBP37.06■■■■□ 3.52
NPLOC4-215ENST00000574095 KIAA0232Q92628 1395 aa37.05■■■■□ 3.52
NPLOC4-215ENST00000574095 BRWD3Q6RI45 1802 aa37.03■■■■□ 3.52
NPLOC4-215ENST00000574095 CHRNA2Q15822 529 aa37.03■■■■□ 3.52
NPLOC4-215ENST00000574095 SEPT12Q8IYM1 358 aa37.03■■■■□ 3.52
NPLOC4-215ENST00000574095 USP6P35125 1406 aa37.02■■■■□ 3.52
NPLOC4-215ENST00000574095 ONECUT3O60422 494 aaPredicted RBP37■■■■□ 3.51
NPLOC4-215ENST00000574095 NLRP13Q86W25 1043 aa37■■■■□ 3.51
NPLOC4-215ENST00000574095 BRD4O60885 1362 aaPredicted RBP37■■■■□ 3.51
NPLOC4-215ENST00000574095 USP19O94966 1318 aa36.97■■■■□ 3.51
NPLOC4-215ENST00000574095 NRKQ7Z2Y5 1582 aa36.96■■■■□ 3.51
NPLOC4-215ENST00000574095 SBNO2Q9Y2G9 1366 aa36.96■■■■□ 3.51
NPLOC4-215ENST00000574095 EP400Q96L91 3159 aa36.96■■■■□ 3.51
NPLOC4-215ENST00000574095 FAM98CQ17RN3 349 aaKnown RBP36.95■■■■□ 3.51
NPLOC4-215ENST00000574095 SPATA31A5Q5VU36 1347 aa36.93■■■■□ 3.5
NPLOC4-215ENST00000574095 SPATA31A7Q8IWB4 1347 aa36.93■■■■□ 3.5
NPLOC4-215ENST00000574095 A0A0G2JS52 829 aa36.93■■■■□ 3.5
NPLOC4-215ENST00000574095 NLRP6P59044 892 aa36.93■■■■□ 3.5
NPLOC4-215ENST00000574095 MYT1Q01538 1121 aa36.93■■■■□ 3.5
NPLOC4-215ENST00000574095 SSH2Q76I76 1423 aa36.93■■■■□ 3.5
NPLOC4-215ENST00000574095 GCP02774 474 aa36.92■■■■□ 3.5
NPLOC4-215ENST00000574095 ZNF692Q9BU19 519 aaPredicted RBP36.92■■■■□ 3.5
NPLOC4-215ENST00000574095 STRN4Q9NRL3 753 aa36.92■■■■□ 3.5
NPLOC4-215ENST00000574095 AKAP12Q02952 1782 aa36.91■■■■□ 3.5
NPLOC4-215ENST00000574095 KRT27Q7Z3Y8 459 aa36.88■■■■□ 3.49
NPLOC4-215ENST00000574095 PCGF6Q9BYE7 350 aa36.88■■■■□ 3.49
NPLOC4-215ENST00000574095 CPDO75976 1380 aa36.88■■■■□ 3.49
NPLOC4-215ENST00000574095 PIK3C2AO00443 1686 aa36.86■■■■□ 3.49
NPLOC4-215ENST00000574095 TTC21BQ7Z4L5 1316 aa36.86■■■■□ 3.49
NPLOC4-215ENST00000574095 EVA1CP58658 441 aa36.86■■■■□ 3.49
NPLOC4-215ENST00000574095 CCDC125Q86Z20 511 aa36.86■■■■□ 3.49
NPLOC4-215ENST00000574095 CPSF1Q10570 1443 aaKnown RBP36.85■■■■□ 3.49
NPLOC4-215ENST00000574095 CAMTA1Q9Y6Y1 1673 aa36.84■■■■□ 3.49
NPLOC4-215ENST00000574095 SPATA31A1Q5TZJ5 1347 aa36.84■■■■□ 3.49
NPLOC4-215ENST00000574095 KTN1Q86UP2 1357 aaKnown RBP36.83■■■■□ 3.49
NPLOC4-215ENST00000574095 ZBTB7CA1YPR0 619 aa36.82■■■■□ 3.48
NPLOC4-215ENST00000574095 LMO7Q8WWI1 1683 aa36.82■■■■□ 3.48
NPLOC4-215ENST00000574095 SLIT3O75094 1523 aa36.81■■■■□ 3.48
NPLOC4-215ENST00000574095 TMC1Q8TDI8 760 aa36.81■■■■□ 3.48
NPLOC4-215ENST00000574095 ST20-MTHFSA0A0A6YYL1 179 aa36.8■■■■□ 3.48
NPLOC4-215ENST00000574095 USP35Q9P2H5 1018 aa36.79■■■■□ 3.48
NPLOC4-215ENST00000574095 TTC21AQ8NDW8 1320 aa36.78■■■■□ 3.48
NPLOC4-215ENST00000574095 MON2Q7Z3U7 1717 aa36.77■■■■□ 3.48
NPLOC4-215ENST00000574095 LARP1Q6PKG0 1096 aaKnown RBP36.77■■■■□ 3.48
NPLOC4-215ENST00000574095 SLC12A5Q9H2X9 1139 aa36.77■■■■□ 3.48
NPLOC4-215ENST00000574095 BLMP54132 1417 aaPredicted RBP36.76■■■■□ 3.48
NPLOC4-215ENST00000574095 TESK2Q96S53 571 aa36.76■■■■□ 3.48
NPLOC4-215ENST00000574095 THSD7AQ9UPZ6 1657 aa36.76■■■■□ 3.47
NPLOC4-215ENST00000574095 CD163L1Q9NR16 1453 aa36.75■■■■□ 3.47
NPLOC4-215ENST00000574095 SUGP2Q8IX01 1082 aaKnown RBP eCLIP36.73■■■■□ 3.47
NPLOC4-215ENST00000574095 SOX12O15370 315 aa36.72■■■■□ 3.47
NPLOC4-215ENST00000574095 FAM182BQ5T319 152 aa36.72■■■■□ 3.47
NPLOC4-215ENST00000574095 PUS7Q96PZ0 661 aaKnown RBP36.71■■■■□ 3.47
NPLOC4-215ENST00000574095 COL5A2P05997 1499 aaPredicted RBP36.7■■■■□ 3.47
NPLOC4-215ENST00000574095 AATKQ6ZMQ8 1374 aa36.7■■■■□ 3.47
NPLOC4-215ENST00000574095 HDGFL2Q7Z4V5 671 aaPredicted RBP36.7■■■■□ 3.47
NPLOC4-215ENST00000574095 SF3B2Q13435 895 aaKnown RBP36.69■■■■□ 3.46
NPLOC4-215ENST00000574095 KCNH5Q8NCM2 988 aa36.69■■■■□ 3.46
NPLOC4-215ENST00000574095 ZRANB1Q9UGI0 708 aa36.69■■■■□ 3.46
NPLOC4-215ENST00000574095 CLSPNQ9HAW4 1339 aa36.68■■■■□ 3.46
NPLOC4-215ENST00000574095 DEFB132Q7Z7B7 95 aa36.68■■■■□ 3.46
NPLOC4-215ENST00000574095 BARGINQ6ZT62 677 aa36.67■■■■□ 3.46
NPLOC4-215ENST00000574095 COL18A1P39060 1754 aa36.67■■■■□ 3.46
NPLOC4-215ENST00000574095 ARHGEF25Q86VW2 580 aa36.66■■■■□ 3.46
NPLOC4-215ENST00000574095 TCP11L2Q8N4U5 519 aa36.66■■■■□ 3.46
NPLOC4-215ENST00000574095 TIMELESSQ9UNS1 1208 aa36.66■■■■□ 3.46
NPLOC4-215ENST00000574095 NME9Q86XW9 330 aa36.65■■■■□ 3.46
NPLOC4-215ENST00000574095 TERF2IPQ9NYB0 399 aa36.65■■■■□ 3.46
NPLOC4-215ENST00000574095 USP47Q96K76 1375 aa36.65■■■■□ 3.46
NPLOC4-215ENST00000574095 AXIN2Q9Y2T1 843 aa36.64■■■■□ 3.46
NPLOC4-215ENST00000574095 SLC24A1O60721 1099 aa36.63■■■■□ 3.45
NPLOC4-215ENST00000574095 A0A1W2PP64 1363 aa36.63■■■■□ 3.45
NPLOC4-215ENST00000574095 USP31Q70CQ4 1352 aa36.61■■■■□ 3.45
NPLOC4-215ENST00000574095 CRB1P82279 1406 aa36.6■■■■□ 3.45
NPLOC4-215ENST00000574095 THRAP3Q9Y2W1 955 aaKnown RBP36.6■■■■□ 3.45
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms