RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 CCDC61Q9Y6R9 512 aa30.46■■■□□ 2.47
CHRNB1-206ENST00000574054 CENPJQ9HC77 1338 aaPredicted RBP30.46■■■□□ 2.47
CHRNB1-206ENST00000574054 SIN3AQ96ST3 1273 aa30.45■■■□□ 2.47
CHRNB1-206ENST00000574054 ACEP12821 1306 aa30.44■■■□□ 2.46
CHRNB1-206ENST00000574054 A0A0G2JS52 829 aa30.43■■■□□ 2.46
CHRNB1-206ENST00000574054 SRPK2P78362 688 aaKnown RBP30.43■■■□□ 2.46
CHRNB1-206ENST00000574054 MYT1Q01538 1121 aa30.43■■■□□ 2.46
CHRNB1-206ENST00000574054 NEUROD1Q13562 356 aa30.43■■■□□ 2.46
CHRNB1-206ENST00000574054 CCDC125Q86Z20 511 aa30.43■■■□□ 2.46
CHRNB1-206ENST00000574054 PRDM11Q9NQV5 511 aa30.43■■■□□ 2.46
CHRNB1-206ENST00000574054 COL14A1Q05707 1796 aaKnown RBP30.42■■■□□ 2.46
CHRNB1-206ENST00000574054 NUTM2GQ5VZR2 741 aa30.42■■■□□ 2.46
CHRNB1-206ENST00000574054 TOPAZ1Q8N9V7 1692 aa30.42■■■□□ 2.46
CHRNB1-206ENST00000574054 POLR3AO14802 1390 aaPredicted RBP30.41■■■□□ 2.46
CHRNB1-206ENST00000574054 NBPF8Q3BBV2 869 aa30.41■■■□□ 2.46
CHRNB1-206ENST00000574054 PLEKHG3A1L390 1219 aa30.4■■■□□ 2.46
CHRNB1-206ENST00000574054 NRAPQ86VF7 1730 aa30.39■■■□□ 2.46
CHRNB1-206ENST00000574054 BRWD3Q6RI45 1802 aa30.39■■■□□ 2.46
CHRNB1-206ENST00000574054 CRYBG1Q9Y4K1 1723 aa30.39■■■□□ 2.45
CHRNB1-206ENST00000574054 ONECUT3O60422 494 aaPredicted RBP30.38■■■□□ 2.45
CHRNB1-206ENST00000574054 FAM98CQ17RN3 349 aaKnown RBP30.37■■■□□ 2.45
CHRNB1-206ENST00000574054 CABP2Q9NPB3 220 aa30.37■■■□□ 2.45
CHRNB1-206ENST00000574054 KRT27Q7Z3Y8 459 aa30.36■■■□□ 2.45
CHRNB1-206ENST00000574054 KIAA0232Q92628 1395 aa30.36■■■□□ 2.45
CHRNB1-206ENST00000574054 PPIP5K1Q6PFW1 1433 aa30.35■■■□□ 2.45
CHRNB1-206ENST00000574054 QRICH2Q9H0J4 1663 aa30.35■■■□□ 2.45
CHRNB1-206ENST00000574054 BLMP54132 1417 aaPredicted RBP30.34■■■□□ 2.45
CHRNB1-206ENST00000574054 CHRNA2Q15822 529 aa30.34■■■□□ 2.45
CHRNB1-206ENST00000574054 SRCAPQ6ZRS2 3230 aa30.33■■■□□ 2.45
CHRNB1-206ENST00000574054 ZC3H6P61129 1189 aaKnown RBP30.33■■■□□ 2.45
CHRNB1-206ENST00000574054 ABTB2Q8N961 1025 aa30.32■■■□□ 2.44
CHRNB1-206ENST00000574054 PHRF1Q9P1Y6 1649 aaKnown RBP30.32■■■□□ 2.44
CHRNB1-206ENST00000574054 SPATA31A5Q5VU36 1347 aa30.31■■■□□ 2.44
CHRNB1-206ENST00000574054 SPATA31A7Q8IWB4 1347 aa30.31■■■□□ 2.44
CHRNB1-206ENST00000574054 SF3B2Q13435 895 aaKnown RBP30.31■■■□□ 2.44
CHRNB1-206ENST00000574054 ZRANB1Q9UGI0 708 aa30.31■■■□□ 2.44
CHRNB1-206ENST00000574054 ROCK2O75116 1388 aaKnown RBP30.3■■■□□ 2.44
CHRNB1-206ENST00000574054 STRN4Q9NRL3 753 aa30.29■■■□□ 2.44
CHRNB1-206ENST00000574054 TRPM1Q7Z4N2 1603 aa30.29■■■□□ 2.44
CHRNB1-206ENST00000574054 DEFB132Q7Z7B7 95 aa30.26■■■□□ 2.43
CHRNB1-206ENST00000574054 CABP1Q9NZU7 370 aa30.26■■■□□ 2.43
CHRNB1-206ENST00000574054 EVC2Q86UK5 1308 aa30.25■■■□□ 2.43
CHRNB1-206ENST00000574054 NLRP13Q86W25 1043 aa30.23■■■□□ 2.43
CHRNB1-206ENST00000574054 USP19O94966 1318 aa30.22■■■□□ 2.43
CHRNB1-206ENST00000574054 NRKQ7Z2Y5 1582 aa30.22■■■□□ 2.43
CHRNB1-206ENST00000574054 EVA1CP58658 441 aa30.21■■■□□ 2.43
CHRNB1-206ENST00000574054 SPATA31A1Q5TZJ5 1347 aa30.21■■■□□ 2.43
CHRNB1-206ENST00000574054 BRD4O60885 1362 aaPredicted RBP30.19■■■□□ 2.42
CHRNB1-206ENST00000574054 USP6P35125 1406 aa30.19■■■□□ 2.42
CHRNB1-206ENST00000574054 CPDO75976 1380 aa30.18■■■□□ 2.42
CHRNB1-206ENST00000574054 FAM182BQ5T319 152 aa30.18■■■□□ 2.42
CHRNB1-206ENST00000574054 USP35Q9P2H5 1018 aa30.18■■■□□ 2.42
CHRNB1-206ENST00000574054 GCP02774 474 aa30.17■■■□□ 2.42
CHRNB1-206ENST00000574054 THSD7AQ9UPZ6 1657 aa30.17■■■□□ 2.42
CHRNB1-206ENST00000574054 SSH2Q76I76 1423 aa30.15■■■□□ 2.42
CHRNB1-206ENST00000574054 ZBTB7CA1YPR0 619 aa30.15■■■□□ 2.42
CHRNB1-206ENST00000574054 NLRP6P59044 892 aa30.15■■■□□ 2.42
CHRNB1-206ENST00000574054 BAG6P46379 1132 aa30.13■■■□□ 2.41
CHRNB1-206ENST00000574054 LARP1Q6PKG0 1096 aaKnown RBP30.13■■■□□ 2.41
CHRNB1-206ENST00000574054 CAMTA1Q9Y6Y1 1673 aa30.13■■■□□ 2.41
CHRNB1-206ENST00000574054 TONSLQ96HA7 1378 aa30.11■■■□□ 2.41
CHRNB1-206ENST00000574054 LMO7Q8WWI1 1683 aa30.09■■■□□ 2.41
CHRNB1-206ENST00000574054 CARD11Q9BXL7 1154 aa30.09■■■□□ 2.41
CHRNB1-206ENST00000574054 TCP11L2Q8N4U5 519 aa30.07■■■□□ 2.4
CHRNB1-206ENST00000574054 BARGINQ6ZT62 677 aa30.06■■■□□ 2.4
CHRNB1-206ENST00000574054 ZNF692Q9BU19 519 aaPredicted RBP30.06■■■□□ 2.4
CHRNB1-206ENST00000574054 PIK3C2AO00443 1686 aa30.04■■■□□ 2.4
CHRNB1-206ENST00000574054 TTC21BQ7Z4L5 1316 aa30.04■■■□□ 2.4
CHRNB1-206ENST00000574054 SLIT3O75094 1523 aa30.04■■■□□ 2.4
CHRNB1-206ENST00000574054 COL5A2P05997 1499 aaPredicted RBP30.04■■■□□ 2.4
CHRNB1-206ENST00000574054 RGPD1P0DJD0 1748 aa30.03■■■□□ 2.4
CHRNB1-206ENST00000574054 EN1Q05925 392 aaPredicted RBP30.03■■■□□ 2.4
CHRNB1-206ENST00000574054 PDE3BQ13370 1112 aa30.03■■■□□ 2.4
CHRNB1-206ENST00000574054 FAM196AQ6ZSG2 479 aa30.03■■■□□ 2.4
CHRNB1-206ENST00000574054 AATKQ6ZMQ8 1374 aa30.02■■■□□ 2.4
CHRNB1-206ENST00000574054 KTN1Q86UP2 1357 aaKnown RBP30.01■■■□□ 2.39
CHRNB1-206ENST00000574054 SBNO2Q9Y2G9 1366 aa30.01■■■□□ 2.39
CHRNB1-206ENST00000574054 SOX12O15370 315 aa30■■■□□ 2.39
CHRNB1-206ENST00000574054 TRIM37O94972 964 aa30■■■□□ 2.39
CHRNB1-206ENST00000574054 THRAP3Q9Y2W1 955 aaKnown RBP30■■■□□ 2.39
CHRNB1-206ENST00000574054 TTC21AQ8NDW8 1320 aa29.99■■■□□ 2.39
CHRNB1-206ENST00000574054 AKAP12Q02952 1782 aa29.99■■■□□ 2.39
CHRNB1-206ENST00000574054 TRIM26Q12899 539 aaPredicted RBP29.98■■■□□ 2.39
CHRNB1-206ENST00000574054 CRB1P82279 1406 aa29.97■■■□□ 2.39
CHRNB1-206ENST00000574054 CPSF1Q10570 1443 aaKnown RBP29.97■■■□□ 2.39
CHRNB1-206ENST00000574054 KCNH5Q8NCM2 988 aa29.96■■■□□ 2.39
CHRNB1-206ENST00000574054 PSDA5PKW4 1024 aaPredicted RBP29.95■■■□□ 2.39
CHRNB1-206ENST00000574054 TMC1Q8TDI8 760 aa29.95■■■□□ 2.39
CHRNB1-206ENST00000574054 TNS1Q9HBL0 1735 aaKnown RBP29.95■■■□□ 2.38
CHRNB1-206ENST00000574054 TOM1L2Q6ZVM7 507 aa29.94■■■□□ 2.38
CHRNB1-206ENST00000574054 DISP2A7MBM2 1401 aa29.94■■■□□ 2.38
CHRNB1-206ENST00000574054 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.93■■■□□ 2.38
CHRNB1-206ENST00000574054 APBA3O96018 575 aa29.92■■■□□ 2.38
CHRNB1-206ENST00000574054 ARHGEF25Q86VW2 580 aa29.92■■■□□ 2.38
CHRNB1-206ENST00000574054 AXIN2Q9Y2T1 843 aa29.92■■■□□ 2.38
CHRNB1-206ENST00000574054 EZH2Q15910 746 aaKnown RBP29.91■■■□□ 2.38
CHRNB1-206ENST00000574054 COL18A1P39060 1754 aa29.89■■■□□ 2.38
CHRNB1-206ENST00000574054 WDR17Q8IZU2 1322 aa29.89■■■□□ 2.38
CHRNB1-206ENST00000574054 MON2Q7Z3U7 1717 aa29.88■■■□□ 2.37
CHRNB1-206ENST00000574054 CSB-PGBD3P0DP91 1061 aa29.88■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms