RNA–Protein interactions for RNA: ENST00000573872.5

TRAP1-208, Transcript of TNF receptor associated protein 1, humanhuman

TSL 3

Gene TRAP1, Length 656 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAP1-208ENST00000573872 C11orf95C9JLR9 678 aaPredicted RBP18.37■□□□□ 0.53
TRAP1-208ENST00000573872 ARHGEF10O15013 1369 aa18.37■□□□□ 0.53
TRAP1-208ENST00000573872 MED1Q15648 1581 aaPredicted RBP18.37■□□□□ 0.53
TRAP1-208ENST00000573872 TMC1Q8TDI8 760 aa18.36■□□□□ 0.53
TRAP1-208ENST00000573872 A0A1W2PP64 1363 aa18.35■□□□□ 0.53
TRAP1-208ENST00000573872 KTN1Q86UP2 1357 aaKnown RBP18.34■□□□□ 0.53
TRAP1-208ENST00000573872 ANKRD36BQ8N2N9 1353 aa18.33■□□□□ 0.53
TRAP1-208ENST00000573872 ABCA3Q99758 1704 aa18.33■□□□□ 0.52
TRAP1-208ENST00000573872 CRYBG1Q9Y4K1 1723 aa18.33■□□□□ 0.52
TRAP1-208ENST00000573872 TTC21BQ7Z4L5 1316 aa18.32■□□□□ 0.52
TRAP1-208ENST00000573872 PAK3O75914 559 aaPredicted RBP18.32■□□□□ 0.52
TRAP1-208ENST00000573872 TERF2IPQ9NYB0 399 aa18.32■□□□□ 0.52
TRAP1-208ENST00000573872 PIK3C2AO00443 1686 aa18.31■□□□□ 0.52
TRAP1-208ENST00000573872 HDGFL2Q7Z4V5 671 aaPredicted RBP18.31■□□□□ 0.52
TRAP1-208ENST00000573872 EDC4Q6P2E9 1401 aaKnown RBP18.31■□□□□ 0.52
TRAP1-208ENST00000573872 KIF7Q2M1P5 1343 aa18.3■□□□□ 0.52
TRAP1-208ENST00000573872 TTC21AQ8NDW8 1320 aa18.3■□□□□ 0.52
TRAP1-208ENST00000573872 LMOD2Q6P5Q4 547 aa18.3■□□□□ 0.52
TRAP1-208ENST00000573872 NUTM2BA6NNL0 878 aaPredicted RBP18.29■□□□□ 0.52
TRAP1-208ENST00000573872 NUTM2EB1AL46 878 aaPredicted RBP18.29■□□□□ 0.52
TRAP1-208ENST00000573872 NUTM2AQ8IVF1 878 aaPredicted RBP18.29■□□□□ 0.52
TRAP1-208ENST00000573872 USP19O94966 1318 aa18.28■□□□□ 0.52
TRAP1-208ENST00000573872 ABTB2Q8N961 1025 aa18.28■□□□□ 0.52
TRAP1-208ENST00000573872 CABLES1Q8TDN4 633 aa18.28■□□□□ 0.52
TRAP1-208ENST00000573872 MARF1Q9Y4F3 1742 aaKnown RBP18.28■□□□□ 0.52
TRAP1-208ENST00000573872 PHRF1Q9P1Y6 1649 aaKnown RBP18.27■□□□□ 0.52
TRAP1-208ENST00000573872 USP54Q70EL1 1684 aa18.27■□□□□ 0.52
TRAP1-208ENST00000573872 USP31Q70CQ4 1352 aa18.26■□□□□ 0.51
TRAP1-208ENST00000573872 CCDC7Q96M83 1385 aa18.26■□□□□ 0.51
TRAP1-208ENST00000573872 WASHC2AQ641Q2 1341 aa18.25■□□□□ 0.51
TRAP1-208ENST00000573872 SLIT3O75094 1523 aa18.25■□□□□ 0.51
TRAP1-208ENST00000573872 NUTM2GQ5VZR2 741 aa18.25■□□□□ 0.51
TRAP1-208ENST00000573872 NLRP13Q86W25 1043 aa18.25■□□□□ 0.51
TRAP1-208ENST00000573872 POLR3GLQ9BT43 218 aa18.25■□□□□ 0.51
TRAP1-208ENST00000573872 CARD14Q9BXL6 1004 aa18.25■□□□□ 0.51
TRAP1-208ENST00000573872 ADAMTS2O95450 1211 aa18.23■□□□□ 0.51
TRAP1-208ENST00000573872 NLRP6P59044 892 aa18.23■□□□□ 0.51
TRAP1-208ENST00000573872 NME9Q86XW9 330 aa18.23■□□□□ 0.51
TRAP1-208ENST00000573872 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.23■□□□□ 0.51
TRAP1-208ENST00000573872 RGS17Q9UGC6 210 aaPredicted RBP18.22■□□□□ 0.51
TRAP1-208ENST00000573872 OVOS2A0A0J9YW53 1432 aa18.22■□□□□ 0.51
TRAP1-208ENST00000573872 OVOS2Q6IE36 1432 aa18.22■□□□□ 0.51
TRAP1-208ENST00000573872 MEX3CQ5U5Q3 659 aaKnown RBP18.21■□□□□ 0.51
TRAP1-208ENST00000573872 ZRANB1Q9UGI0 708 aa18.21■□□□□ 0.51
TRAP1-208ENST00000573872 NSD3Q9BZ95 1437 aa18.21■□□□□ 0.51
TRAP1-208ENST00000573872 PLEKHG5O94827 1062 aa18.2■□□□□ 0.5
TRAP1-208ENST00000573872 GCP02774 474 aa18.2■□□□□ 0.5
TRAP1-208ENST00000573872 PANK3Q9H999 370 aa18.2■□□□□ 0.5
TRAP1-208ENST00000573872 HAP1P54257 671 aaPredicted RBP18.19■□□□□ 0.5
TRAP1-208ENST00000573872 FNBP4Q8N3X1 1017 aaPredicted RBP18.19■□□□□ 0.5
TRAP1-208ENST00000573872 C8orf37Q96NL8 207 aa18.19■□□□□ 0.5
TRAP1-208ENST00000573872 SLIT2O94813 1529 aa18.18■□□□□ 0.5
TRAP1-208ENST00000573872 NFAT5O94916 1531 aa18.18■□□□□ 0.5
TRAP1-208ENST00000573872 CPDO75976 1380 aa18.18■□□□□ 0.5
TRAP1-208ENST00000573872 FYB1O15117 783 aa18.18■□□□□ 0.5
TRAP1-208ENST00000573872 KIF20BQ96Q89 1820 aa18.17■□□□□ 0.5
TRAP1-208ENST00000573872 FAM83GA6ND36 823 aa18.17■□□□□ 0.5
TRAP1-208ENST00000573872 AFF2P51816 1311 aa18.17■□□□□ 0.5
TRAP1-208ENST00000573872 KIAA0232Q92628 1395 aa18.17■□□□□ 0.5
TRAP1-208ENST00000573872 BCL9LQ86UU0 1499 aa18.16■□□□□ 0.5
TRAP1-208ENST00000573872 NGLY1Q96IV0 654 aa18.16■□□□□ 0.5
TRAP1-208ENST00000573872 PHF23Q9BUL5 403 aaPredicted RBP18.16■□□□□ 0.5
TRAP1-208ENST00000573872 COL14A1Q05707 1796 aaKnown RBP18.16■□□□□ 0.5
TRAP1-208ENST00000573872 PLCH1Q4KWH8 1693 aa18.15■□□□□ 0.5
TRAP1-208ENST00000573872 KCNH5Q8NCM2 988 aa18.15■□□□□ 0.5
TRAP1-208ENST00000573872 NWD2Q9ULI1 1742 aa18.15■□□□□ 0.5
TRAP1-208ENST00000573872 ZC3H6P61129 1189 aaKnown RBP18.14■□□□□ 0.49
TRAP1-208ENST00000573872 LMO7Q8WWI1 1683 aa18.14■□□□□ 0.49
TRAP1-208ENST00000573872 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.14■□□□□ 0.49
TRAP1-208ENST00000573872 PER1O15534 1290 aaPredicted RBP18.13■□□□□ 0.49
TRAP1-208ENST00000573872 COG3Q96JB2 828 aa18.13■□□□□ 0.49
TRAP1-208ENST00000573872 GGNBP2Q9H3C7 697 aa18.13■□□□□ 0.49
TRAP1-208ENST00000573872 CGNL1Q0VF96 1302 aa18.13■□□□□ 0.49
TRAP1-208ENST00000573872 NRAPQ86VF7 1730 aa18.12■□□□□ 0.49
TRAP1-208ENST00000573872 COL18A1P39060 1754 aa18.12■□□□□ 0.49
TRAP1-208ENST00000573872 ZNF772Q68DY9 489 aaPredicted RBP18.12■□□□□ 0.49
TRAP1-208ENST00000573872 ARHGEF25Q86VW2 580 aa18.12■□□□□ 0.49
TRAP1-208ENST00000573872 PRDM11Q9NQV5 511 aa18.12■□□□□ 0.49
TRAP1-208ENST00000573872 POTEAQ6S8J7 498 aa18.11■□□□□ 0.49
TRAP1-208ENST00000573872 USP21Q9UK80 565 aa18.11■□□□□ 0.49
TRAP1-208ENST00000573872 ANKRD26Q9UPS8 1709 aa18.1■□□□□ 0.49
TRAP1-208ENST00000573872 ATRNO75882 1429 aa18.1■□□□□ 0.49
TRAP1-208ENST00000573872 AATKQ6ZMQ8 1374 aa18.1■□□□□ 0.49
TRAP1-208ENST00000573872 CHRNA2Q15822 529 aa18.1■□□□□ 0.49
TRAP1-208ENST00000573872 CAMTA1Q9Y6Y1 1673 aa18.09■□□□□ 0.49
TRAP1-208ENST00000573872 ABCC6O95255 1503 aa18.09■□□□□ 0.49
TRAP1-208ENST00000573872 NSD2O96028 1365 aa18.09■□□□□ 0.49
TRAP1-208ENST00000573872 AMER1Q5JTC6 1135 aaPredicted RBP18.09■□□□□ 0.49
TRAP1-208ENST00000573872 UNC5CLQ8IV45 518 aa18.09■□□□□ 0.49
TRAP1-208ENST00000573872 SOX12O15370 315 aa18.08■□□□□ 0.48
TRAP1-208ENST00000573872 BTG4Q9NY30 223 aa18.08■□□□□ 0.48
TRAP1-208ENST00000573872 KNSTRNQ9Y448 316 aa18.08■□□□□ 0.48
TRAP1-208ENST00000573872 LTN1O94822 1766 aa18.07■□□□□ 0.48
TRAP1-208ENST00000573872 TRPC5Q9UL62 973 aaPredicted RBP18.06■□□□□ 0.48
TRAP1-208ENST00000573872 NPC1L1Q9UHC9 1359 aa18.05■□□□□ 0.48
TRAP1-208ENST00000573872 FBLN1P23142 703 aa18.05■□□□□ 0.48
TRAP1-208ENST00000573872 QTRT2Q9H974 415 aaKnown RBP18.05■□□□□ 0.48
TRAP1-208ENST00000573872 AXIN2Q9Y2T1 843 aa18.05■□□□□ 0.48
TRAP1-208ENST00000573872 COL5A2P05997 1499 aaPredicted RBP18.05■□□□□ 0.48
TRAP1-208ENST00000573872 VPS72Q15906 364 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms