RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 ITPRIPQ8IWB1 547 aa24.19■■□□□ 1.46
SCARF1-206ENST00000573852 HDAC1Q13547 482 aaPredicted RBP24.18■■□□□ 1.46
SCARF1-206ENST00000573852 ATF7IPQ6VMQ6 1270 aa24.18■■□□□ 1.46
SCARF1-206ENST00000573852 NPM1P06748 294 aaKnown RBP eCLIP24.18■■□□□ 1.46
SCARF1-206ENST00000573852 IDI1Q13907 227 aa24.18■■□□□ 1.46
SCARF1-206ENST00000573852 NOB1Q9ULX3 412 aaKnown RBP24.18■■□□□ 1.46
SCARF1-206ENST00000573852 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.17■■□□□ 1.46
SCARF1-206ENST00000573852 DDX19BQ9UMR2 479 aa24.17■■□□□ 1.46
SCARF1-206ENST00000573852 FYB1O15117 783 aa24.17■■□□□ 1.46
SCARF1-206ENST00000573852 SPRYD3Q8NCJ5 442 aa24.17■■□□□ 1.46
SCARF1-206ENST00000573852 C22orf23Q9BZE7 217 aa24.16■■□□□ 1.46
SCARF1-206ENST00000573852 RAPGEF3O95398 923 aa24.15■■□□□ 1.46
SCARF1-206ENST00000573852 MFAP1P55081 439 aaKnown RBP24.15■■□□□ 1.46
SCARF1-206ENST00000573852 IL16Q14005 1332 aa24.14■■□□□ 1.46
SCARF1-206ENST00000573852 RIPK4P57078 832 aa24.14■■□□□ 1.46
SCARF1-206ENST00000573852 TMEM57Q8N5G2 664 aa24.14■■□□□ 1.46
SCARF1-206ENST00000573852 SMC5Q8IY18 1101 aa24.13■■□□□ 1.45
SCARF1-206ENST00000573852 MINK1Q8N4C8 1332 aaPredicted RBP24.13■■□□□ 1.45
SCARF1-206ENST00000573852 CD163L1Q9NR16 1453 aa24.12■■□□□ 1.45
SCARF1-206ENST00000573852 ZBTB40Q9NUA8 1239 aa24.11■■□□□ 1.45
SCARF1-206ENST00000573852 ZFYVE9O95405 1425 aa24.11■■□□□ 1.45
SCARF1-206ENST00000573852 TERF2IPQ9NYB0 399 aa24.11■■□□□ 1.45
SCARF1-206ENST00000573852 PTPRMP28827 1452 aa24.11■■□□□ 1.45
SCARF1-206ENST00000573852 ANKRD26Q9UPS8 1709 aa24.1■■□□□ 1.45
SCARF1-206ENST00000573852 PRAM1Q96QH2 718 aa24.09■■□□□ 1.45
SCARF1-206ENST00000573852 MYO5BQ9ULV0 1848 aa24.09■■□□□ 1.45
SCARF1-206ENST00000573852 ATAD2Q6PL18 1390 aa24.09■■□□□ 1.45
SCARF1-206ENST00000573852 DIAPH1O60610 1272 aaKnown RBP24.09■■□□□ 1.45
SCARF1-206ENST00000573852 ARHGAP31Q2M1Z3 1444 aa24.08■■□□□ 1.45
SCARF1-206ENST00000573852 MED14O60244 1454 aa24.08■■□□□ 1.45
SCARF1-206ENST00000573852 FAM43AQ8N2R8 423 aa24.07■■□□□ 1.44
SCARF1-206ENST00000573852 DIP2CQ9Y2E4 1556 aa24.07■■□□□ 1.44
SCARF1-206ENST00000573852 PNPLA6Q8IY17 1366 aa24.06■■□□□ 1.44
SCARF1-206ENST00000573852 MCM4P33991 863 aa24.06■■□□□ 1.44
SCARF1-206ENST00000573852 KIF16BQ96L93 1317 aa24.06■■□□□ 1.44
SCARF1-206ENST00000573852 SLC52A1Q9NWF4 448 aa24.06■■□□□ 1.44
SCARF1-206ENST00000573852 IPO8O15397 1037 aaKnown RBP24.05■■□□□ 1.44
SCARF1-206ENST00000573852 CHMP5Q9NZZ3 219 aa24.04■■□□□ 1.44
SCARF1-206ENST00000573852 CLTCQ00610 1675 aaKnown RBP24.04■■□□□ 1.44
SCARF1-206ENST00000573852 NUCB1Q02818 461 aa24.03■■□□□ 1.44
SCARF1-206ENST00000573852 L1TD1Q5T7N2 865 aaKnown RBP24.03■■□□□ 1.44
SCARF1-206ENST00000573852 YTHDC2Q9H6S0 1430 aaKnown RBP24.03■■□□□ 1.44
SCARF1-206ENST00000573852 ALDH1L2Q3SY69 923 aa24.02■■□□□ 1.44
SCARF1-206ENST00000573852 HDGFL2Q7Z4V5 671 aaPredicted RBP24.02■■□□□ 1.44
SCARF1-206ENST00000573852 PNNQ9H307 717 aaKnown RBP24.02■■□□□ 1.44
SCARF1-206ENST00000573852 TMEM131LA2VDJ0 1609 aa24.01■■□□□ 1.43
SCARF1-206ENST00000573852 CDK19Q9BWU1 502 aa24.01■■□□□ 1.43
SCARF1-206ENST00000573852 LNPKQ9C0E8 428 aa24.01■■□□□ 1.43
SCARF1-206ENST00000573852 CABP1Q9NZU7 370 aa24.01■■□□□ 1.43
SCARF1-206ENST00000573852 FCHSD2O94868 740 aa24■■□□□ 1.43
SCARF1-206ENST00000573852 FBLN1P23142 703 aa24■■□□□ 1.43
SCARF1-206ENST00000573852 LRRC7Q96NW7 1537 aa24■■□□□ 1.43
SCARF1-206ENST00000573852 NEO1Q92859 1461 aa24■■□□□ 1.43
SCARF1-206ENST00000573852 PRKAR2BP31323 418 aa23.99■■□□□ 1.43
SCARF1-206ENST00000573852 RSPH6AQ9H0K4 717 aa23.98■■□□□ 1.43
SCARF1-206ENST00000573852 CHD1LQ86WJ1 897 aa23.98■■□□□ 1.43
SCARF1-206ENST00000573852 HSCBQ8IWL3 235 aa23.98■■□□□ 1.43
SCARF1-206ENST00000573852 ZNF692Q9BU19 519 aaPredicted RBP23.98■■□□□ 1.43
SCARF1-206ENST00000573852 GZF1Q9H116 711 aaPredicted RBP23.98■■□□□ 1.43
SCARF1-206ENST00000573852 KIF20BQ96Q89 1820 aa23.98■■□□□ 1.43
SCARF1-206ENST00000573852 ARXQ96QS3 562 aa23.97■■□□□ 1.43
SCARF1-206ENST00000573852 PREX1Q8TCU6 1659 aa23.97■■□□□ 1.43
SCARF1-206ENST00000573852 ARHGEF40Q8TER5 1519 aa23.97■■□□□ 1.43
SCARF1-206ENST00000573852 RBM25P49756 843 aaKnown RBP23.97■■□□□ 1.43
SCARF1-206ENST00000573852 CDC42BPGQ6DT37 1551 aa23.96■■□□□ 1.43
SCARF1-206ENST00000573852 FAM135BQ49AJ0 1406 aa23.96■■□□□ 1.43
SCARF1-206ENST00000573852 FSD2A1L4K1 749 aa23.96■■□□□ 1.43
SCARF1-206ENST00000573852 XRCC6P12956 609 aaKnown RBP eCLIP23.96■■□□□ 1.43
SCARF1-206ENST00000573852 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.96■■□□□ 1.43
SCARF1-206ENST00000573852 POLKQ9UBT6 870 aa23.96■■□□□ 1.43
SCARF1-206ENST00000573852 YEATS2Q9ULM3 1422 aa23.95■■□□□ 1.43
SCARF1-206ENST00000573852 BRPF1P55201 1214 aaPredicted RBP23.95■■□□□ 1.42
SCARF1-206ENST00000573852 PHACTR3Q96KR7 559 aa23.95■■□□□ 1.42
SCARF1-206ENST00000573852 GOLGA6L3A6NEY3 463 aa23.94■■□□□ 1.42
SCARF1-206ENST00000573852 TRAK2O60296 914 aa23.94■■□□□ 1.42
SCARF1-206ENST00000573852 THUMPD2Q9BTF0 503 aaKnown RBP23.94■■□□□ 1.42
SCARF1-206ENST00000573852 ZBTB7BO15156 539 aaPredicted RBP23.94■■□□□ 1.42
SCARF1-206ENST00000573852 ALKQ9UM73 1620 aa23.93■■□□□ 1.42
SCARF1-206ENST00000573852 FBXO31Q5XUX0 539 aaPredicted RBP23.93■■□□□ 1.42
SCARF1-206ENST00000573852 PPIP5K1Q6PFW1 1433 aa23.93■■□□□ 1.42
SCARF1-206ENST00000573852 NCOA3Q9Y6Q9 1424 aa23.93■■□□□ 1.42
SCARF1-206ENST00000573852 RICTORQ6R327 1708 aa23.92■■□□□ 1.42
SCARF1-206ENST00000573852 VAMP4O75379 141 aa23.92■■□□□ 1.42
SCARF1-206ENST00000573852 HMOX1P09601 288 aa23.92■■□□□ 1.42
SCARF1-206ENST00000573852 DDIT3P35638 169 aa23.92■■□□□ 1.42
SCARF1-206ENST00000573852 RRAGDQ9NQL2 400 aaPredicted RBP23.92■■□□□ 1.42
SCARF1-206ENST00000573852 MRPL50Q8N5N7 158 aaKnown RBP23.92■■□□□ 1.42
SCARF1-206ENST00000573852 ZNF428Q96B54 188 aa23.92■■□□□ 1.42
SCARF1-206ENST00000573852 C1orf115Q9H7X2 142 aa23.92■■□□□ 1.42
SCARF1-206ENST00000573852 TSPYL6Q8N831 410 aa23.91■■□□□ 1.42
SCARF1-206ENST00000573852 NFE2L2Q16236 605 aa23.91■■□□□ 1.42
SCARF1-206ENST00000573852 BMP2KLQ5H9B9 411 aa23.91■■□□□ 1.42
SCARF1-206ENST00000573852 ANKRD45Q5TZF3 282 aa23.91■■□□□ 1.42
SCARF1-206ENST00000573852 SNX21Q969T3 373 aa23.91■■□□□ 1.42
SCARF1-206ENST00000573852 PANK2Q9BZ23 570 aa23.88■■□□□ 1.41
SCARF1-206ENST00000573852 MAP2P11137 1827 aaKnown RBP23.88■■□□□ 1.41
SCARF1-206ENST00000573852 PIK3R4Q99570 1358 aa23.88■■□□□ 1.41
SCARF1-206ENST00000573852 ELL2O00472 640 aaPredicted RBP23.87■■□□□ 1.41
SCARF1-206ENST00000573852 WAPLQ7Z5K2 1190 aa23.87■■□□□ 1.41
SCARF1-206ENST00000573852 ARHGAP45Q92619 1136 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms