RNA–Protein interactions for RNA: ENST00000573846.1

LCAT-206, Transcript of lecithin-cholesterol acyltransferase, humanhuman

TSL 2

Gene LCAT, Length 568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCAT-206ENST00000573846 USP21Q9UK80 565 aa27.38■■□□□ 1.97
LCAT-206ENST00000573846 QTRT2Q9H974 415 aaKnown RBP27.36■■□□□ 1.97
LCAT-206ENST00000573846 RXRBP28702 533 aa27.35■■□□□ 1.97
LCAT-206ENST00000573846 FNBP4Q8N3X1 1017 aaPredicted RBP27.35■■□□□ 1.97
LCAT-206ENST00000573846 ALS2Q96Q42 1657 aa27.35■■□□□ 1.97
LCAT-206ENST00000573846 USP47Q96K76 1375 aa27.34■■□□□ 1.97
LCAT-206ENST00000573846 ABTB2Q8N961 1025 aa27.33■■□□□ 1.97
LCAT-206ENST00000573846 MARF1Q9Y4F3 1742 aaKnown RBP27.33■■□□□ 1.96
LCAT-206ENST00000573846 ZNF692Q9BU19 519 aaPredicted RBP27.32■■□□□ 1.96
LCAT-206ENST00000573846 BRD4O60885 1362 aaPredicted RBP27.32■■□□□ 1.96
LCAT-206ENST00000573846 NUTM2GQ5VZR2 741 aa27.31■■□□□ 1.96
LCAT-206ENST00000573846 TMC1Q8TDI8 760 aa27.3■■□□□ 1.96
LCAT-206ENST00000573846 TRPC5Q9UL62 973 aaPredicted RBP27.3■■□□□ 1.96
LCAT-206ENST00000573846 TESK2Q96S53 571 aa27.29■■□□□ 1.96
LCAT-206ENST00000573846 USP6P35125 1406 aa27.28■■□□□ 1.96
LCAT-206ENST00000573846 RBM6P78332 1123 aaKnown RBP27.28■■□□□ 1.96
LCAT-206ENST00000573846 PUS7Q96PZ0 661 aaKnown RBP27.28■■□□□ 1.96
LCAT-206ENST00000573846 NLRP13Q86W25 1043 aa27.27■■□□□ 1.96
LCAT-206ENST00000573846 TMF1P82094 1093 aa27.26■■□□□ 1.95
LCAT-206ENST00000573846 ABCA3Q99758 1704 aa27.26■■□□□ 1.95
LCAT-206ENST00000573846 UNC5CLQ8IV45 518 aa27.24■■□□□ 1.95
LCAT-206ENST00000573846 KTN1Q86UP2 1357 aaKnown RBP27.23■■□□□ 1.95
LCAT-206ENST00000573846 HDGFL2Q7Z4V5 671 aaPredicted RBP27.23■■□□□ 1.95
LCAT-206ENST00000573846 BCL9LQ86UU0 1499 aa27.23■■□□□ 1.95
LCAT-206ENST00000573846 SLIT2O94813 1529 aa27.22■■□□□ 1.95
LCAT-206ENST00000573846 FAM83GA6ND36 823 aa27.22■■□□□ 1.95
LCAT-206ENST00000573846 NLRP6P59044 892 aa27.22■■□□□ 1.95
LCAT-206ENST00000573846 SLC12A5Q9H2X9 1139 aa27.21■■□□□ 1.95
LCAT-206ENST00000573846 PRDM11Q9NQV5 511 aa27.21■■□□□ 1.95
LCAT-206ENST00000573846 TERF2IPQ9NYB0 399 aa27.21■■□□□ 1.95
LCAT-206ENST00000573846 ATRNO75882 1429 aa27.2■■□□□ 1.94
LCAT-206ENST00000573846 CPSF1Q10570 1443 aaKnown RBP27.2■■□□□ 1.94
LCAT-206ENST00000573846 CDCA8Q53HL2 280 aa27.2■■□□□ 1.94
LCAT-206ENST00000573846 TTC21BQ7Z4L5 1316 aa27.19■■□□□ 1.94
LCAT-206ENST00000573846 TTC21AQ8NDW8 1320 aa27.18■■□□□ 1.94
LCAT-206ENST00000573846 ZC3H6P61129 1189 aaKnown RBP27.18■■□□□ 1.94
LCAT-206ENST00000573846 CDK12Q9NYV4 1490 aaPredicted RBP27.18■■□□□ 1.94
LCAT-206ENST00000573846 CRYBG1Q9Y4K1 1723 aa27.17■■□□□ 1.94
LCAT-206ENST00000573846 BTG4Q9NY30 223 aa27.17■■□□□ 1.94
LCAT-206ENST00000573846 CCDC9Q9Y3X0 531 aaKnown RBP27.17■■□□□ 1.94
LCAT-206ENST00000573846 NINLQ9Y2I6 1382 aa27.17■■□□□ 1.94
LCAT-206ENST00000573846 AKAP12Q02952 1782 aa27.17■■□□□ 1.94
LCAT-206ENST00000573846 SSH2Q76I76 1423 aa27.16■■□□□ 1.94
LCAT-206ENST00000573846 EIF4G2P78344 907 aaKnown RBP eCLIP27.16■■□□□ 1.94
LCAT-206ENST00000573846 GJD4Q96KN9 370 aaPredicted RBP27.16■■□□□ 1.94
LCAT-206ENST00000573846 PHRF1Q9P1Y6 1649 aaKnown RBP27.16■■□□□ 1.94
LCAT-206ENST00000573846 USP19O94966 1318 aa27.16■■□□□ 1.94
LCAT-206ENST00000573846 PLCH1Q4KWH8 1693 aa27.15■■□□□ 1.94
LCAT-206ENST00000573846 KIAA0232Q92628 1395 aa27.15■■□□□ 1.94
LCAT-206ENST00000573846 GCP02774 474 aa27.15■■□□□ 1.94
LCAT-206ENST00000573846 COL14A1Q05707 1796 aaKnown RBP27.14■■□□□ 1.94
LCAT-206ENST00000573846 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.14■■□□□ 1.94
LCAT-206ENST00000573846 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.14■■□□□ 1.94
LCAT-206ENST00000573846 NWD2Q9ULI1 1742 aa27.13■■□□□ 1.93
LCAT-206ENST00000573846 CHRNA2Q15822 529 aa27.12■■□□□ 1.93
LCAT-206ENST00000573846 VPS72Q15906 364 aa27.12■■□□□ 1.93
LCAT-206ENST00000573846 CD163L1Q9NR16 1453 aa27.11■■□□□ 1.93
LCAT-206ENST00000573846 A0A1W2PP64 1363 aa27.1■■□□□ 1.93
LCAT-206ENST00000573846 MON2Q7Z3U7 1717 aa27.1■■□□□ 1.93
LCAT-206ENST00000573846 NRKQ7Z2Y5 1582 aa27.09■■□□□ 1.93
LCAT-206ENST00000573846 RGS12O14924 1447 aa27.09■■□□□ 1.93
LCAT-206ENST00000573846 ZBTB7CA1YPR0 619 aa27.09■■□□□ 1.93
LCAT-206ENST00000573846 EDC4Q6P2E9 1401 aaKnown RBP27.08■■□□□ 1.93
LCAT-206ENST00000573846 PIK3C2AO00443 1686 aa27.08■■□□□ 1.93
LCAT-206ENST00000573846 HSPA5P11021 654 aaKnown RBP27.08■■□□□ 1.93
LCAT-206ENST00000573846 KCNH5Q8NCM2 988 aa27.08■■□□□ 1.93
LCAT-206ENST00000573846 CPDO75976 1380 aa27.08■■□□□ 1.93
LCAT-206ENST00000573846 EVA1CP58658 441 aa27.06■■□□□ 1.92
LCAT-206ENST00000573846 SOX12O15370 315 aa27.05■■□□□ 1.92
LCAT-206ENST00000573846 STRN4Q9NRL3 753 aa27.05■■□□□ 1.92
LCAT-206ENST00000573846 NME9Q86XW9 330 aa27.04■■□□□ 1.92
LCAT-206ENST00000573846 POLR3GLQ9BT43 218 aa27.04■■□□□ 1.92
LCAT-206ENST00000573846 SLIT3O75094 1523 aa27.04■■□□□ 1.92
LCAT-206ENST00000573846 ANKRD36BQ8N2N9 1353 aa27.03■■□□□ 1.92
LCAT-206ENST00000573846 NRAPQ86VF7 1730 aa27.02■■□□□ 1.92
LCAT-206ENST00000573846 GLI3P10071 1580 aa27.01■■□□□ 1.92
LCAT-206ENST00000573846 A0A0G2JS52 829 aa27.01■■□□□ 1.91
LCAT-206ENST00000573846 MYT1Q01538 1121 aa27.01■■□□□ 1.91
LCAT-206ENST00000573846 ZRANB1Q9UGI0 708 aa27.01■■□□□ 1.91
LCAT-206ENST00000573846 USP31Q70CQ4 1352 aa27■■□□□ 1.91
LCAT-206ENST00000573846 SPATA31A5Q5VU36 1347 aa26.97■■□□□ 1.91
LCAT-206ENST00000573846 SPATA31A7Q8IWB4 1347 aa26.97■■□□□ 1.91
LCAT-206ENST00000573846 SEPT12Q8IYM1 358 aa26.97■■□□□ 1.91
LCAT-206ENST00000573846 AATKQ6ZMQ8 1374 aa26.97■■□□□ 1.91
LCAT-206ENST00000573846 FAM98CQ17RN3 349 aaKnown RBP26.96■■□□□ 1.91
LCAT-206ENST00000573846 ARHGEF25Q86VW2 580 aa26.96■■□□□ 1.91
LCAT-206ENST00000573846 COG3Q96JB2 828 aa26.95■■□□□ 1.9
LCAT-206ENST00000573846 CAMTA1Q9Y6Y1 1673 aa26.95■■□□□ 1.9
LCAT-206ENST00000573846 ONECUT3O60422 494 aaPredicted RBP26.94■■□□□ 1.9
LCAT-206ENST00000573846 USP35Q9P2H5 1018 aa26.94■■□□□ 1.9
LCAT-206ENST00000573846 SPATA31A1Q5TZJ5 1347 aa26.92■■□□□ 1.9
LCAT-206ENST00000573846 LMO7Q8WWI1 1683 aa26.92■■□□□ 1.9
LCAT-206ENST00000573846 LARP1Q6PKG0 1096 aaKnown RBP26.92■■□□□ 1.9
LCAT-206ENST00000573846 UPF1Q92900 1129 aaKnown RBP eCLIP26.92■■□□□ 1.9
LCAT-206ENST00000573846 USP54Q70EL1 1684 aa26.9■■□□□ 1.9
LCAT-206ENST00000573846 NFAT5O94916 1531 aa26.9■■□□□ 1.9
LCAT-206ENST00000573846 COL5A2P05997 1499 aaPredicted RBP26.89■■□□□ 1.9
LCAT-206ENST00000573846 OVOS2A0A0J9YW53 1432 aa26.89■■□□□ 1.89
LCAT-206ENST00000573846 OVOS2Q6IE36 1432 aa26.89■■□□□ 1.89
LCAT-206ENST00000573846 AXIN2Q9Y2T1 843 aa26.88■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms