RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 CCDC9Q9Y3X0 531 aaKnown RBP32.16■■■□□ 2.74
SNF8-216ENST00000573795 KIAA1210Q9ULL0 1709 aa32.16■■■□□ 2.74
SNF8-216ENST00000573795 TOPAZ1Q8N9V7 1692 aa32.15■■■□□ 2.74
SNF8-216ENST00000573795 NGDNQ8NEJ9 315 aaKnown RBP32.13■■■□□ 2.73
SNF8-216ENST00000573795 BTG4Q9NY30 223 aa32.13■■■□□ 2.73
SNF8-216ENST00000573795 NUDT16Q96DE0 195 aaKnown RBP32.11■■■□□ 2.73
SNF8-216ENST00000573795 PHRF1Q9P1Y6 1649 aaKnown RBP32.11■■■□□ 2.73
SNF8-216ENST00000573795 KRT27Q7Z3Y8 459 aa32.1■■■□□ 2.73
SNF8-216ENST00000573795 DEFB132Q7Z7B7 95 aa32.1■■■□□ 2.73
SNF8-216ENST00000573795 PAK3O75914 559 aaPredicted RBP32.07■■■□□ 2.72
SNF8-216ENST00000573795 FAM98CQ17RN3 349 aaKnown RBP32.06■■■□□ 2.72
SNF8-216ENST00000573795 CDK19Q9BWU1 502 aa32.05■■■□□ 2.72
SNF8-216ENST00000573795 THSD7AQ9UPZ6 1657 aa32.05■■■□□ 2.72
SNF8-216ENST00000573795 POLR3AO14802 1390 aaPredicted RBP32.04■■■□□ 2.72
SNF8-216ENST00000573795 SPATA31A5Q5VU36 1347 aa32.02■■■□□ 2.72
SNF8-216ENST00000573795 SPATA31A7Q8IWB4 1347 aa32.02■■■□□ 2.72
SNF8-216ENST00000573795 NBPF1Q3BBV0 1214 aa32.01■■■□□ 2.71
SNF8-216ENST00000573795 KIAA0232Q92628 1395 aa32■■■□□ 2.71
SNF8-216ENST00000573795 PRDM11Q9NQV5 511 aa32■■■□□ 2.71
SNF8-216ENST00000573795 A0A0G2JS52 829 aa31.99■■■□□ 2.71
SNF8-216ENST00000573795 MYT1Q01538 1121 aa31.99■■■□□ 2.71
SNF8-216ENST00000573795 ACEP12821 1306 aa31.99■■■□□ 2.71
SNF8-216ENST00000573795 SF3B2Q13435 895 aaKnown RBP31.98■■■□□ 2.71
SNF8-216ENST00000573795 NRKQ7Z2Y5 1582 aa31.97■■■□□ 2.71
SNF8-216ENST00000573795 CCDC61Q9Y6R9 512 aa31.96■■■□□ 2.71
SNF8-216ENST00000573795 PLEKHG3A1L390 1219 aa31.95■■■□□ 2.71
SNF8-216ENST00000573795 NBPF8Q3BBV2 869 aa31.95■■■□□ 2.71
SNF8-216ENST00000573795 RGPD1P0DJD0 1748 aa31.95■■■□□ 2.7
SNF8-216ENST00000573795 CHRNA2Q15822 529 aa31.94■■■□□ 2.7
SNF8-216ENST00000573795 NUTM2GQ5VZR2 741 aa31.94■■■□□ 2.7
SNF8-216ENST00000573795 TNS1Q9HBL0 1735 aaKnown RBP31.92■■■□□ 2.7
SNF8-216ENST00000573795 FAM182BQ5T319 152 aa31.91■■■□□ 2.7
SNF8-216ENST00000573795 QRICH2Q9H0J4 1663 aa31.91■■■□□ 2.7
SNF8-216ENST00000573795 SPATA31A1Q5TZJ5 1347 aa31.91■■■□□ 2.7
SNF8-216ENST00000573795 ZC3H6P61129 1189 aaKnown RBP31.9■■■□□ 2.7
SNF8-216ENST00000573795 LMO7Q8WWI1 1683 aa31.89■■■□□ 2.7
SNF8-216ENST00000573795 PPIP5K1Q6PFW1 1433 aa31.87■■■□□ 2.69
SNF8-216ENST00000573795 USP19O94966 1318 aa31.87■■■□□ 2.69
SNF8-216ENST00000573795 CENPJQ9HC77 1338 aaPredicted RBP31.87■■■□□ 2.69
SNF8-216ENST00000573795 BAG6P46379 1132 aa31.86■■■□□ 2.69
SNF8-216ENST00000573795 CAMTA1Q9Y6Y1 1673 aa31.86■■■□□ 2.69
SNF8-216ENST00000573795 STRN4Q9NRL3 753 aa31.85■■■□□ 2.69
SNF8-216ENST00000573795 LRP5O75197 1615 aa31.85■■■□□ 2.69
SNF8-216ENST00000573795 SSH2Q76I76 1423 aa31.84■■■□□ 2.69
SNF8-216ENST00000573795 CPDO75976 1380 aa31.83■■■□□ 2.69
SNF8-216ENST00000573795 CABP2Q9NPB3 220 aa31.83■■■□□ 2.69
SNF8-216ENST00000573795 DISP2A7MBM2 1401 aa31.83■■■□□ 2.69
SNF8-216ENST00000573795 SRPK2P78362 688 aaKnown RBP31.82■■■□□ 2.68
SNF8-216ENST00000573795 ABTB2Q8N961 1025 aa31.82■■■□□ 2.68
SNF8-216ENST00000573795 TRPM1Q7Z4N2 1603 aa31.81■■■□□ 2.68
SNF8-216ENST00000573795 EN1Q05925 392 aaPredicted RBP31.8■■■□□ 2.68
SNF8-216ENST00000573795 L3MBTL2Q969R5 705 aa31.79■■■□□ 2.68
SNF8-216ENST00000573795 PSDA5PKW4 1024 aaPredicted RBP31.77■■■□□ 2.68
SNF8-216ENST00000573795 USP6P35125 1406 aa31.75■■■□□ 2.67
SNF8-216ENST00000573795 LARP1Q6PKG0 1096 aaKnown RBP31.75■■■□□ 2.67
SNF8-216ENST00000573795 BARGINQ6ZT62 677 aa31.75■■■□□ 2.67
SNF8-216ENST00000573795 USP35Q9P2H5 1018 aa31.75■■■□□ 2.67
SNF8-216ENST00000573795 BRD4O60885 1362 aaPredicted RBP31.74■■■□□ 2.67
SNF8-216ENST00000573795 GCP02774 474 aa31.73■■■□□ 2.67
SNF8-216ENST00000573795 NLRP13Q86W25 1043 aa31.73■■■□□ 2.67
SNF8-216ENST00000573795 SLIT3O75094 1523 aa31.73■■■□□ 2.67
SNF8-216ENST00000573795 PIK3C2AO00443 1686 aa31.73■■■□□ 2.67
SNF8-216ENST00000573795 COL5A2P05997 1499 aaPredicted RBP31.72■■■□□ 2.67
SNF8-216ENST00000573795 EVA1CP58658 441 aa31.72■■■□□ 2.67
SNF8-216ENST00000573795 SIN3AQ96ST3 1273 aa31.72■■■□□ 2.67
SNF8-216ENST00000573795 CABP1Q9NZU7 370 aa31.72■■■□□ 2.67
SNF8-216ENST00000573795 FAM196AQ6ZSG2 479 aa31.71■■■□□ 2.67
SNF8-216ENST00000573795 PARP4Q9UKK3 1724 aaKnown RBP31.69■■■□□ 2.66
SNF8-216ENST00000573795 TRIM37O94972 964 aa31.69■■■□□ 2.66
SNF8-216ENST00000573795 EZH2Q15910 746 aaKnown RBP31.69■■■□□ 2.66
SNF8-216ENST00000573795 TCP11L2Q8N4U5 519 aa31.67■■■□□ 2.66
SNF8-216ENST00000573795 CAMKK2Q96RR4 588 aa31.67■■■□□ 2.66
SNF8-216ENST00000573795 RREB1Q92766 1687 aa31.67■■■□□ 2.66
SNF8-216ENST00000573795 COL18A1P39060 1754 aa31.66■■■□□ 2.66
SNF8-216ENST00000573795 AKAP12Q02952 1782 aa31.65■■■□□ 2.66
SNF8-216ENST00000573795 R3HDM1Q15032 1099 aaKnown RBP31.63■■■□□ 2.65
SNF8-216ENST00000573795 THRAP3Q9Y2W1 955 aaKnown RBP31.63■■■□□ 2.65
SNF8-216ENST00000573795 EVC2Q86UK5 1308 aa31.63■■■□□ 2.65
SNF8-216ENST00000573795 NLRP6P59044 892 aa31.62■■■□□ 2.65
SNF8-216ENST00000573795 CRB1P82279 1406 aa31.62■■■□□ 2.65
SNF8-216ENST00000573795 PDE3BQ13370 1112 aa31.62■■■□□ 2.65
SNF8-216ENST00000573795 AATKQ6ZMQ8 1374 aa31.62■■■□□ 2.65
SNF8-216ENST00000573795 NUP188Q5SRE5 1749 aa31.61■■■□□ 2.65
SNF8-216ENST00000573795 ROCK2O75116 1388 aaKnown RBP31.61■■■□□ 2.65
SNF8-216ENST00000573795 PEAK1Q9H792 1746 aa31.6■■■□□ 2.65
SNF8-216ENST00000573795 PARD3Q8TEW0 1356 aa31.59■■■□□ 2.65
SNF8-216ENST00000573795 APBA3O96018 575 aa31.59■■■□□ 2.65
SNF8-216ENST00000573795 LRRC37A3O60309 1634 aa31.59■■■□□ 2.65
SNF8-216ENST00000573795 NEUROD1Q13562 356 aa31.58■■■□□ 2.65
SNF8-216ENST00000573795 WNK3Q9BYP7 1800 aa31.58■■■□□ 2.65
SNF8-216ENST00000573795 ZBTB7CA1YPR0 619 aa31.56■■■□□ 2.64
SNF8-216ENST00000573795 TTC21BQ7Z4L5 1316 aa31.54■■■□□ 2.64
SNF8-216ENST00000573795 RGPD5Q99666 1765 aa31.54■■■□□ 2.64
SNF8-216ENST00000573795 CPSF1Q10570 1443 aaKnown RBP31.54■■■□□ 2.64
SNF8-216ENST00000573795 AXIN2Q9Y2T1 843 aa31.53■■■□□ 2.64
SNF8-216ENST00000573795 SBF2Q86WG5 1849 aa31.52■■■□□ 2.64
SNF8-216ENST00000573795 MON2Q7Z3U7 1717 aa31.52■■■□□ 2.64
SNF8-216ENST00000573795 NFAT5O94916 1531 aa31.5■■■□□ 2.63
SNF8-216ENST00000573795 ARHGEF25Q86VW2 580 aa31.49■■■□□ 2.63
SNF8-216ENST00000573795 ZNF692Q9BU19 519 aaPredicted RBP31.49■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms