RNA–Protein interactions for RNA: ENST00000573725.1

PRPF8-209, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 5

Gene PRPF8, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-209ENST00000573725 SIRT1Q96EB6 747 aa8.86□□□□□ -0.99
PRPF8-209ENST00000573725 GJD4Q96KN9 370 aaPredicted RBP8.86□□□□□ -0.99
PRPF8-209ENST00000573725 ADGRB1O14514 1584 aa8.86□□□□□ -0.99
PRPF8-209ENST00000573725 DLC1Q96QB1 1528 aa8.85□□□□□ -0.99
PRPF8-209ENST00000573725 KRT28Q7Z3Y7 464 aa8.85□□□□□ -0.99
PRPF8-209ENST00000573725 RTN4Q9NQC3 1192 aaKnown RBP8.85□□□□□ -0.99
PRPF8-209ENST00000573725 TNS3Q68CZ2 1445 aa8.85□□□□□ -0.99
PRPF8-209ENST00000573725 ITSN1Q15811 1721 aa8.85□□□□□ -0.99
PRPF8-209ENST00000573725 DHX57Q6P158 1386 aaKnown RBP8.85□□□□□ -0.99
PRPF8-209ENST00000573725 SAFB2Q14151 953 aaKnown RBP eCLIP8.84□□□□□ -0.99
PRPF8-209ENST00000573725 UNC5CLQ8IV45 518 aa8.84□□□□□ -0.99
PRPF8-209ENST00000573725 PHF8Q9UPP1 1060 aa8.84□□□□□ -0.99
PRPF8-209ENST00000573725 C11orf95C9JLR9 678 aaPredicted RBP8.83□□□□□ -1
PRPF8-209ENST00000573725 NCBP3Q53F19 620 aaKnown RBP8.83□□□□□ -1
PRPF8-209ENST00000573725 CABLES1Q8TDN4 633 aa8.83□□□□□ -1
PRPF8-209ENST00000573725 PRAM1Q96QH2 718 aa8.83□□□□□ -1
PRPF8-209ENST00000573725 COL14A1Q05707 1796 aaKnown RBP8.83□□□□□ -1
PRPF8-209ENST00000573725 RAB3GAP2Q9H2M9 1393 aa8.83□□□□□ -1
PRPF8-209ENST00000573725 GLIPR1L2Q4G1C9 344 aa8.82□□□□□ -1
PRPF8-209ENST00000573725 SBNO1A3KN83 1393 aa8.82□□□□□ -1
PRPF8-209ENST00000573725 ANKARQ7Z5J8 1434 aa8.81□□□□□ -1
PRPF8-209ENST00000573725 PSME1Q06323 249 aa8.81□□□□□ -1
PRPF8-209ENST00000573725 CCDC125Q86Z20 511 aa8.81□□□□□ -1
PRPF8-209ENST00000573725 PMFBP1Q8TBY8 1022 aa8.81□□□□□ -1
PRPF8-209ENST00000573725 BLMP54132 1417 aaPredicted RBP8.8□□□□□ -1
PRPF8-209ENST00000573725 TULP4Q9NRJ4 1543 aa8.8□□□□□ -1
PRPF8-209ENST00000573725 PHRF1Q9P1Y6 1649 aaKnown RBP8.8□□□□□ -1
PRPF8-209ENST00000573725 RGPD1P0DJD0 1748 aa8.8□□□□□ -1
PRPF8-209ENST00000573725 VPS72Q15906 364 aa8.8□□□□□ -1
PRPF8-209ENST00000573725 LMOD2Q6P5Q4 547 aa8.8□□□□□ -1
PRPF8-209ENST00000573725 HIRIP3Q9BW71 556 aaPredicted RBP8.8□□□□□ -1
PRPF8-209ENST00000573725 POGKQ9P215 609 aa8.8□□□□□ -1
PRPF8-209ENST00000573725 ZRANB1Q9UGI0 708 aa8.8□□□□□ -1
PRPF8-209ENST00000573725 NOP58Q9Y2X3 529 aaKnown RBP8.8□□□□□ -1
PRPF8-209ENST00000573725 ARHGEF10O15013 1369 aa8.8□□□□□ -1
PRPF8-209ENST00000573725 TOPAZ1Q8N9V7 1692 aa8.8□□□□□ -1
PRPF8-209ENST00000573725 TNS1Q9HBL0 1735 aaKnown RBP8.8□□□□□ -1
PRPF8-209ENST00000573725 PRR36Q9H6K5 1346 aa8.8□□□□□ -1
PRPF8-209ENST00000573725 FAM83GA6ND36 823 aa8.79□□□□□ -1
PRPF8-209ENST00000573725 HAP1P54257 671 aaPredicted RBP8.79□□□□□ -1
PRPF8-209ENST00000573725 SEPT12Q8IYM1 358 aa8.79□□□□□ -1
PRPF8-209ENST00000573725 ZMYND15Q9H091 742 aa8.79□□□□□ -1
PRPF8-209ENST00000573725 TRAK1Q9UPV9 953 aa8.79□□□□□ -1
PRPF8-209ENST00000573725 KIAA1210Q9ULL0 1709 aa8.79□□□□□ -1
PRPF8-209ENST00000573725 MINK1Q8N4C8 1332 aaPredicted RBP8.79□□□□□ -1
PRPF8-209ENST00000573725 THSD7AQ9UPZ6 1657 aa8.78□□□□□ -1
PRPF8-209ENST00000573725 ONECUT3O60422 494 aaPredicted RBP8.78□□□□□ -1
PRPF8-209ENST00000573725 MAPK8IP2Q13387 824 aaPredicted RBP8.78□□□□□ -1
PRPF8-209ENST00000573725 DEFB132Q7Z7B7 95 aa8.78□□□□□ -1
PRPF8-209ENST00000573725 KDM2AQ9Y2K7 1162 aa8.78□□□□□ -1
PRPF8-209ENST00000573725 LRP5O75197 1615 aa8.77□□□□□ -1.01
PRPF8-209ENST00000573725 NBR1Q14596 966 aa8.77□□□□□ -1.01
PRPF8-209ENST00000573725 DCAF11Q8TEB1 546 aa8.77□□□□□ -1.01
PRPF8-209ENST00000573725 CNKSR2Q8WXI2 1034 aa8.77□□□□□ -1.01
PRPF8-209ENST00000573725 RSPH6AQ9H0K4 717 aa8.77□□□□□ -1.01
PRPF8-209ENST00000573725 WASHC2AQ641Q2 1341 aa8.77□□□□□ -1.01
PRPF8-209ENST00000573725 ATP7BP35670 1465 aa8.77□□□□□ -1.01
PRPF8-209ENST00000573725 WASLO00401 505 aaPredicted RBP8.76□□□□□ -1.01
PRPF8-209ENST00000573725 RTL5Q5HYW3 569 aaPredicted RBP8.76□□□□□ -1.01
PRPF8-209ENST00000573725 KRT27Q7Z3Y8 459 aa8.76□□□□□ -1.01
PRPF8-209ENST00000573725 CCDC9Q9Y3X0 531 aaKnown RBP8.76□□□□□ -1.01
PRPF8-209ENST00000573725 EIF3AQ14152 1382 aaKnown RBP8.75□□□□□ -1.01
PRPF8-209ENST00000573725 GPRASP1Q5JY77 1395 aa8.75□□□□□ -1.01
PRPF8-209ENST00000573725 BTG4Q9NY30 223 aa8.75□□□□□ -1.01
PRPF8-209ENST00000573725 SBF2Q86WG5 1849 aa8.75□□□□□ -1.01
PRPF8-209ENST00000573725 RGPD5Q99666 1765 aa8.74□□□□□ -1.01
PRPF8-209ENST00000573725 PDE4CQ08493 712 aa8.74□□□□□ -1.01
PRPF8-209ENST00000573725 FAM98CQ17RN3 349 aaKnown RBP8.74□□□□□ -1.01
PRPF8-209ENST00000573725 QRICH2Q9H0J4 1663 aa8.74□□□□□ -1.01
PRPF8-209ENST00000573725 SF3B2Q13435 895 aaKnown RBP8.73□□□□□ -1.01
PRPF8-209ENST00000573725 VSIG10Q8N0Z9 540 aa8.73□□□□□ -1.01
PRPF8-209ENST00000573725 NGDNQ8NEJ9 315 aaKnown RBP8.73□□□□□ -1.01
PRPF8-209ENST00000573725 SPATA31A5Q5VU36 1347 aa8.73□□□□□ -1.01
PRPF8-209ENST00000573725 SPATA31A7Q8IWB4 1347 aa8.73□□□□□ -1.01
PRPF8-209ENST00000573725 NRKQ7Z2Y5 1582 aa8.73□□□□□ -1.01
PRPF8-209ENST00000573725 KAT6BQ8WYB5 2073 aa8.73□□□□□ -1.01
PRPF8-209ENST00000573725 LMO7Q8WWI1 1683 aa8.72□□□□□ -1.01
PRPF8-209ENST00000573725 A0A0G2JS52 829 aa8.72□□□□□ -1.01
PRPF8-209ENST00000573725 NPM3O75607 178 aaKnown RBP8.72□□□□□ -1.01
PRPF8-209ENST00000573725 PAK3O75914 559 aaPredicted RBP8.72□□□□□ -1.01
PRPF8-209ENST00000573725 FGD1P98174 961 aa8.72□□□□□ -1.01
PRPF8-209ENST00000573725 AAMPQ13685 434 aa8.72□□□□□ -1.01
PRPF8-209ENST00000573725 FAM182BQ5T319 152 aa8.72□□□□□ -1.01
PRPF8-209ENST00000573725 NUDT16Q96DE0 195 aaKnown RBP8.72□□□□□ -1.01
PRPF8-209ENST00000573725 STAC3Q96MF2 364 aa8.72□□□□□ -1.01
PRPF8-209ENST00000573725 RREB1Q92766 1687 aa8.72□□□□□ -1.01
PRPF8-209ENST00000573725 NUP188Q5SRE5 1749 aa8.71□□□□□ -1.01
PRPF8-209ENST00000573725 WNK3Q9BYP7 1800 aa8.71□□□□□ -1.01
PRPF8-209ENST00000573725 PRDM11Q9NQV5 511 aa8.71□□□□□ -1.02
PRPF8-209ENST00000573725 POLR3AO14802 1390 aaPredicted RBP8.71□□□□□ -1.02
PRPF8-209ENST00000573725 KIAA0232Q92628 1395 aa8.71□□□□□ -1.02
PRPF8-209ENST00000573725 CAMTA1Q9Y6Y1 1673 aa8.7□□□□□ -1.02
PRPF8-209ENST00000573725 PDIA4P13667 645 aaKnown RBP8.7□□□□□ -1.02
PRPF8-209ENST00000573725 BAG6P46379 1132 aa8.7□□□□□ -1.02
PRPF8-209ENST00000573725 CHRNA2Q15822 529 aa8.7□□□□□ -1.02
PRPF8-209ENST00000573725 NUTM2GQ5VZR2 741 aa8.7□□□□□ -1.02
PRPF8-209ENST00000573725 CDK19Q9BWU1 502 aa8.7□□□□□ -1.02
PRPF8-209ENST00000573725 TIMELESSQ9UNS1 1208 aa8.7□□□□□ -1.02
PRPF8-209ENST00000573725 PARP4Q9UKK3 1724 aaKnown RBP8.7□□□□□ -1.02
PRPF8-209ENST00000573725 COL18A1P39060 1754 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms