RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 CNKSR2Q8WXI2 1034 aa19.06■□□□□ 0.64
RPAIN-213ENST00000573577 SLC24A1O60721 1099 aa19.05■□□□□ 0.64
RPAIN-213ENST00000573577 PAK3O75914 559 aaPredicted RBP19.05■□□□□ 0.64
RPAIN-213ENST00000573577 HAP1P54257 671 aaPredicted RBP19.05■□□□□ 0.64
RPAIN-213ENST00000573577 CABLES1Q8TDN4 633 aa19.04■□□□□ 0.64
RPAIN-213ENST00000573577 MARF1Q9Y4F3 1742 aaKnown RBP19.04■□□□□ 0.64
RPAIN-213ENST00000573577 USP47Q96K76 1375 aa19.04■□□□□ 0.64
RPAIN-213ENST00000573577 ABCA3Q99758 1704 aa19.03■□□□□ 0.64
RPAIN-213ENST00000573577 PLEKHG5O94827 1062 aa19.03■□□□□ 0.64
RPAIN-213ENST00000573577 FNBP4Q8N3X1 1017 aaPredicted RBP19.03■□□□□ 0.64
RPAIN-213ENST00000573577 CABP1Q9NZU7 370 aa19.03■□□□□ 0.64
RPAIN-213ENST00000573577 ATAD2Q6PL18 1390 aa19.03■□□□□ 0.64
RPAIN-213ENST00000573577 USP21Q9UK80 565 aa19.02■□□□□ 0.64
RPAIN-213ENST00000573577 ST20-MTHFSA0A0A6YYL1 179 aa19.01■□□□□ 0.63
RPAIN-213ENST00000573577 RXRBP28702 533 aa19■□□□□ 0.63
RPAIN-213ENST00000573577 QTRT2Q9H974 415 aaKnown RBP19■□□□□ 0.63
RPAIN-213ENST00000573577 BRD4O60885 1362 aaPredicted RBP18.99■□□□□ 0.63
RPAIN-213ENST00000573577 USP6P35125 1406 aa18.99■□□□□ 0.63
RPAIN-213ENST00000573577 BCL9LQ86UU0 1499 aa18.98■□□□□ 0.63
RPAIN-213ENST00000573577 CRYBG1Q9Y4K1 1723 aa18.98■□□□□ 0.63
RPAIN-213ENST00000573577 TESK2Q96S53 571 aa18.98■□□□□ 0.63
RPAIN-213ENST00000573577 SLIT2O94813 1529 aa18.98■□□□□ 0.63
RPAIN-213ENST00000573577 EIF4G2P78344 907 aaKnown RBP eCLIP18.97■□□□□ 0.63
RPAIN-213ENST00000573577 TRPC5Q9UL62 973 aaPredicted RBP18.97■□□□□ 0.63
RPAIN-213ENST00000573577 RBM6P78332 1123 aaKnown RBP18.96■□□□□ 0.63
RPAIN-213ENST00000573577 ATRNO75882 1429 aa18.96■□□□□ 0.63
RPAIN-213ENST00000573577 CDK12Q9NYV4 1490 aaPredicted RBP18.96■□□□□ 0.63
RPAIN-213ENST00000573577 NUTM2GQ5VZR2 741 aa18.95■□□□□ 0.62
RPAIN-213ENST00000573577 ABTB2Q8N961 1025 aa18.95■□□□□ 0.62
RPAIN-213ENST00000573577 CPSF1Q10570 1443 aaKnown RBP18.94■□□□□ 0.62
RPAIN-213ENST00000573577 SSH2Q76I76 1423 aa18.94■□□□□ 0.62
RPAIN-213ENST00000573577 PUS7Q96PZ0 661 aaKnown RBP18.94■□□□□ 0.62
RPAIN-213ENST00000573577 ZNF692Q9BU19 519 aaPredicted RBP18.94■□□□□ 0.62
RPAIN-213ENST00000573577 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.94■□□□□ 0.62
RPAIN-213ENST00000573577 PHRF1Q9P1Y6 1649 aaKnown RBP18.93■□□□□ 0.62
RPAIN-213ENST00000573577 PLCH1Q4KWH8 1693 aa18.93■□□□□ 0.62
RPAIN-213ENST00000573577 FAM83GA6ND36 823 aa18.93■□□□□ 0.62
RPAIN-213ENST00000573577 TMF1P82094 1093 aa18.93■□□□□ 0.62
RPAIN-213ENST00000573577 UNC5CLQ8IV45 518 aa18.93■□□□□ 0.62
RPAIN-213ENST00000573577 AKAP12Q02952 1782 aa18.92■□□□□ 0.62
RPAIN-213ENST00000573577 USP19O94966 1318 aa18.92■□□□□ 0.62
RPAIN-213ENST00000573577 RGS12O14924 1447 aa18.91■□□□□ 0.62
RPAIN-213ENST00000573577 NWD2Q9ULI1 1742 aa18.91■□□□□ 0.62
RPAIN-213ENST00000573577 CDCA8Q53HL2 280 aa18.91■□□□□ 0.62
RPAIN-213ENST00000573577 NLRP13Q86W25 1043 aa18.91■□□□□ 0.62
RPAIN-213ENST00000573577 KTN1Q86UP2 1357 aaKnown RBP18.91■□□□□ 0.62
RPAIN-213ENST00000573577 COL14A1Q05707 1796 aaKnown RBP18.91■□□□□ 0.62
RPAIN-213ENST00000573577 NRKQ7Z2Y5 1582 aa18.9■□□□□ 0.62
RPAIN-213ENST00000573577 TMC1Q8TDI8 760 aa18.9■□□□□ 0.62
RPAIN-213ENST00000573577 CD163L1Q9NR16 1453 aa18.9■□□□□ 0.62
RPAIN-213ENST00000573577 HSPA5P11021 654 aaKnown RBP18.89■□□□□ 0.61
RPAIN-213ENST00000573577 ZEB1P37275 1124 aaPredicted RBP18.89■□□□□ 0.61
RPAIN-213ENST00000573577 PRDM11Q9NQV5 511 aa18.89■□□□□ 0.61
RPAIN-213ENST00000573577 TTC21BQ7Z4L5 1316 aa18.89■□□□□ 0.61
RPAIN-213ENST00000573577 KIAA0232Q92628 1395 aa18.89■□□□□ 0.61
RPAIN-213ENST00000573577 PIK3C2AO00443 1686 aa18.89■□□□□ 0.61
RPAIN-213ENST00000573577 NPM3O75607 178 aaKnown RBP18.88■□□□□ 0.61
RPAIN-213ENST00000573577 NLRP6P59044 892 aa18.88■□□□□ 0.61
RPAIN-213ENST00000573577 GJD4Q96KN9 370 aaPredicted RBP18.88■□□□□ 0.61
RPAIN-213ENST00000573577 SLC12A5Q9H2X9 1139 aa18.88■□□□□ 0.61
RPAIN-213ENST00000573577 TTC21AQ8NDW8 1320 aa18.88■□□□□ 0.61
RPAIN-213ENST00000573577 NINLQ9Y2I6 1382 aa18.88■□□□□ 0.61
RPAIN-213ENST00000573577 MON2Q7Z3U7 1717 aa18.88■□□□□ 0.61
RPAIN-213ENST00000573577 HDGFL2Q7Z4V5 671 aaPredicted RBP18.87■□□□□ 0.61
RPAIN-213ENST00000573577 BTG4Q9NY30 223 aa18.87■□□□□ 0.61
RPAIN-213ENST00000573577 ZC3H6P61129 1189 aaKnown RBP18.86■□□□□ 0.61
RPAIN-213ENST00000573577 VPS72Q15906 364 aa18.86■□□□□ 0.61
RPAIN-213ENST00000573577 TERF2IPQ9NYB0 399 aa18.86■□□□□ 0.61
RPAIN-213ENST00000573577 NRAPQ86VF7 1730 aa18.86■□□□□ 0.61
RPAIN-213ENST00000573577 SLIT3O75094 1523 aa18.85■□□□□ 0.61
RPAIN-213ENST00000573577 A0A1W2PP64 1363 aa18.85■□□□□ 0.61
RPAIN-213ENST00000573577 CPDO75976 1380 aa18.85■□□□□ 0.61
RPAIN-213ENST00000573577 GCP02774 474 aa18.85■□□□□ 0.61
RPAIN-213ENST00000573577 GLI3P10071 1580 aa18.85■□□□□ 0.61
RPAIN-213ENST00000573577 CHRNA2Q15822 529 aa18.84■□□□□ 0.61
RPAIN-213ENST00000573577 EDC4Q6P2E9 1401 aaKnown RBP18.83■□□□□ 0.61
RPAIN-213ENST00000573577 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.82■□□□□ 0.6
RPAIN-213ENST00000573577 CCDC9Q9Y3X0 531 aaKnown RBP18.82■□□□□ 0.6
RPAIN-213ENST00000573577 LMO7Q8WWI1 1683 aa18.79■□□□□ 0.6
RPAIN-213ENST00000573577 NME9Q86XW9 330 aa18.79■□□□□ 0.6
RPAIN-213ENST00000573577 USP31Q70CQ4 1352 aa18.79■□□□□ 0.6
RPAIN-213ENST00000573577 ANKRD36BQ8N2N9 1353 aa18.79■□□□□ 0.6
RPAIN-213ENST00000573577 KCNH5Q8NCM2 988 aa18.78■□□□□ 0.6
RPAIN-213ENST00000573577 SPATA31A5Q5VU36 1347 aa18.77■□□□□ 0.6
RPAIN-213ENST00000573577 SPATA31A7Q8IWB4 1347 aa18.77■□□□□ 0.6
RPAIN-213ENST00000573577 USP54Q70EL1 1684 aa18.77■□□□□ 0.6
RPAIN-213ENST00000573577 CAMTA1Q9Y6Y1 1673 aa18.77■□□□□ 0.6
RPAIN-213ENST00000573577 STRN4Q9NRL3 753 aa18.77■□□□□ 0.6
RPAIN-213ENST00000573577 ZRANB1Q9UGI0 708 aa18.77■□□□□ 0.6
RPAIN-213ENST00000573577 AATKQ6ZMQ8 1374 aa18.77■□□□□ 0.6
RPAIN-213ENST00000573577 ZBTB7CA1YPR0 619 aa18.76■□□□□ 0.59
RPAIN-213ENST00000573577 NFAT5O94916 1531 aa18.75■□□□□ 0.59
RPAIN-213ENST00000573577 SOX12O15370 315 aa18.75■□□□□ 0.59
RPAIN-213ENST00000573577 ONECUT3O60422 494 aaPredicted RBP18.75■□□□□ 0.59
RPAIN-213ENST00000573577 POLR3GLQ9BT43 218 aa18.75■□□□□ 0.59
RPAIN-213ENST00000573577 MYOM1P52179 1685 aa18.74■□□□□ 0.59
RPAIN-213ENST00000573577 EVA1CP58658 441 aa18.74■□□□□ 0.59
RPAIN-213ENST00000573577 ARHGEF25Q86VW2 580 aa18.74■□□□□ 0.59
RPAIN-213ENST00000573577 SEPT12Q8IYM1 358 aa18.74■□□□□ 0.59
RPAIN-213ENST00000573577 UPF1Q92900 1129 aaKnown RBP eCLIP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms