RNA–Protein interactions for RNA: ENST00000573270.1

LINC01996-201, Transcript of long intergenic non-protein coding RNA 1996, humanhuman

TSL 1 (best) BASIC

Gene LINC01996, Length 1,273 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01996-201ENST00000573270 DDX17Q92841 729 aaKnown RBP18.65■□□□□ 0.58
LINC01996-201ENST00000573270 ABCA3Q99758 1704 aa18.65■□□□□ 0.58
LINC01996-201ENST00000573270 CRYBG1Q9Y4K1 1723 aa18.64■□□□□ 0.57
LINC01996-201ENST00000573270 DDX10Q13206 875 aaKnown RBP18.64■□□□□ 0.57
LINC01996-201ENST00000573270 TERF2IPQ9NYB0 399 aa18.64■□□□□ 0.57
LINC01996-201ENST00000573270 XPCQ01831 940 aaPredicted RBP18.63■□□□□ 0.57
LINC01996-201ENST00000573270 PANK3Q9H999 370 aa18.63■□□□□ 0.57
LINC01996-201ENST00000573270 SSH2Q76I76 1423 aa18.63■□□□□ 0.57
LINC01996-201ENST00000573270 PHRF1Q9P1Y6 1649 aaKnown RBP18.63■□□□□ 0.57
LINC01996-201ENST00000573270 FOXO3O43524 673 aa18.62■□□□□ 0.57
LINC01996-201ENST00000573270 NPHP3Q7Z494 1330 aa18.62■□□□□ 0.57
LINC01996-201ENST00000573270 TNS3Q68CZ2 1445 aa18.61■□□□□ 0.57
LINC01996-201ENST00000573270 MED1Q15648 1581 aaPredicted RBP18.6■□□□□ 0.57
LINC01996-201ENST00000573270 CARD14Q9BXL6 1004 aa18.6■□□□□ 0.57
LINC01996-201ENST00000573270 SHPRHQ149N8 1683 aa18.58■□□□□ 0.57
LINC01996-201ENST00000573270 COL22A1Q8NFW1 1626 aaPredicted RBP18.58■□□□□ 0.56
LINC01996-201ENST00000573270 OVOS2A0A0J9YW53 1432 aa18.57■□□□□ 0.56
LINC01996-201ENST00000573270 OVOS2Q6IE36 1432 aa18.57■□□□□ 0.56
LINC01996-201ENST00000573270 SBNO1A3KN83 1393 aa18.56■□□□□ 0.56
LINC01996-201ENST00000573270 BRD4O60885 1362 aaPredicted RBP18.56■□□□□ 0.56
LINC01996-201ENST00000573270 TTC21BQ7Z4L5 1316 aa18.56■□□□□ 0.56
LINC01996-201ENST00000573270 PSME1Q06323 249 aa18.56■□□□□ 0.56
LINC01996-201ENST00000573270 KRT28Q7Z3Y7 464 aa18.56■□□□□ 0.56
LINC01996-201ENST00000573270 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.56■□□□□ 0.56
LINC01996-201ENST00000573270 SOS2Q07890 1332 aaPredicted RBP18.55■□□□□ 0.56
LINC01996-201ENST00000573270 ZNF692Q9BU19 519 aaPredicted RBP18.55■□□□□ 0.56
LINC01996-201ENST00000573270 TTC21AQ8NDW8 1320 aa18.54■□□□□ 0.56
LINC01996-201ENST00000573270 PAK3O75914 559 aaPredicted RBP18.54■□□□□ 0.56
LINC01996-201ENST00000573270 SLIT3O75094 1523 aa18.54■□□□□ 0.56
LINC01996-201ENST00000573270 NME9Q86XW9 330 aa18.53■□□□□ 0.56
LINC01996-201ENST00000573270 PIAS4Q8N2W9 510 aaPredicted RBP18.53■□□□□ 0.56
LINC01996-201ENST00000573270 KNSTRNQ9Y448 316 aa18.53■□□□□ 0.56
LINC01996-201ENST00000573270 CGNL1Q0VF96 1302 aa18.52■□□□□ 0.56
LINC01996-201ENST00000573270 PER1O15534 1290 aaPredicted RBP18.52■□□□□ 0.56
LINC01996-201ENST00000573270 NSD2O96028 1365 aa18.52■□□□□ 0.55
LINC01996-201ENST00000573270 CNGB1Q14028 1251 aaPredicted RBP18.51■□□□□ 0.55
LINC01996-201ENST00000573270 ARHGEF10O15013 1369 aa18.51■□□□□ 0.55
LINC01996-201ENST00000573270 SPATA31A3Q5VYP0 1347 aa18.5■□□□□ 0.55
LINC01996-201ENST00000573270 LTN1O94822 1766 aa18.5■□□□□ 0.55
LINC01996-201ENST00000573270 NFAT5O94916 1531 aa18.5■□□□□ 0.55
LINC01996-201ENST00000573270 AMER1Q5JTC6 1135 aaPredicted RBP18.5■□□□□ 0.55
LINC01996-201ENST00000573270 ZRANB1Q9UGI0 708 aa18.5■□□□□ 0.55
LINC01996-201ENST00000573270 GGNBP2Q9H3C7 697 aa18.49■□□□□ 0.55
LINC01996-201ENST00000573270 PNPLA6Q8IY17 1366 aa18.49■□□□□ 0.55
LINC01996-201ENST00000573270 NPC1L1Q9UHC9 1359 aa18.49■□□□□ 0.55
LINC01996-201ENST00000573270 USP31Q70CQ4 1352 aa18.48■□□□□ 0.55
LINC01996-201ENST00000573270 CC2D1BQ5T0F9 858 aaKnown RBP18.48■□□□□ 0.55
LINC01996-201ENST00000573270 NUTM2GQ5VZR2 741 aa18.48■□□□□ 0.55
LINC01996-201ENST00000573270 LMOD2Q6P5Q4 547 aa18.48■□□□□ 0.55
LINC01996-201ENST00000573270 FYB1O15117 783 aa18.46■□□□□ 0.55
LINC01996-201ENST00000573270 PLEKHG5O94827 1062 aa18.46■□□□□ 0.55
LINC01996-201ENST00000573270 ABTB2Q8N961 1025 aa18.46■□□□□ 0.55
LINC01996-201ENST00000573270 USP19O94966 1318 aa18.46■□□□□ 0.55
LINC01996-201ENST00000573270 HSPA1LP34931 641 aa18.45■□□□□ 0.54
LINC01996-201ENST00000573270 PEAK1Q9H792 1746 aa18.45■□□□□ 0.54
LINC01996-201ENST00000573270 PARD3Q8TEW0 1356 aa18.44■□□□□ 0.54
LINC01996-201ENST00000573270 NLRP6P59044 892 aa18.43■□□□□ 0.54
LINC01996-201ENST00000573270 COG3Q96JB2 828 aa18.43■□□□□ 0.54
LINC01996-201ENST00000573270 MAP2P11137 1827 aaKnown RBP18.42■□□□□ 0.54
LINC01996-201ENST00000573270 DIEXFQ68CQ4 756 aaKnown RBP18.42■□□□□ 0.54
LINC01996-201ENST00000573270 JCADQ9P266 1359 aa18.42■□□□□ 0.54
LINC01996-201ENST00000573270 PLCH1Q4KWH8 1693 aa18.41■□□□□ 0.54
LINC01996-201ENST00000573270 LRRC59Q96AG4 307 aaKnown RBP18.41■□□□□ 0.54
LINC01996-201ENST00000573270 SOX12O15370 315 aa18.4■□□□□ 0.54
LINC01996-201ENST00000573270 MORC1Q86VD1 984 aa18.4■□□□□ 0.54
LINC01996-201ENST00000573270 LRP6O75581 1613 aa18.4■□□□□ 0.54
LINC01996-201ENST00000573270 SMG6Q86US8 1419 aaKnown RBP18.4■□□□□ 0.54
LINC01996-201ENST00000573270 TNNT2P45379 298 aaPredicted RBP18.39■□□□□ 0.53
LINC01996-201ENST00000573270 NLRP13Q86W25 1043 aa18.39■□□□□ 0.53
LINC01996-201ENST00000573270 CABLES1Q8TDN4 633 aa18.39■□□□□ 0.53
LINC01996-201ENST00000573270 LMO7Q8WWI1 1683 aa18.38■□□□□ 0.53
LINC01996-201ENST00000573270 RGPD5Q99666 1765 aa18.37■□□□□ 0.53
LINC01996-201ENST00000573270 COL18A1P39060 1754 aa18.37■□□□□ 0.53
LINC01996-201ENST00000573270 COL14A1Q05707 1796 aaKnown RBP18.37■□□□□ 0.53
LINC01996-201ENST00000573270 ANP32CO43423 234 aa18.36■□□□□ 0.53
LINC01996-201ENST00000573270 ABCC6O95255 1503 aa18.36■□□□□ 0.53
LINC01996-201ENST00000573270 PRKRIP1Q9H875 184 aaPredicted RBP18.36■□□□□ 0.53
LINC01996-201ENST00000573270 CDK12Q9NYV4 1490 aaPredicted RBP18.35■□□□□ 0.53
LINC01996-201ENST00000573270 AATKQ6ZMQ8 1374 aa18.35■□□□□ 0.53
LINC01996-201ENST00000573270 NRAPQ86VF7 1730 aa18.35■□□□□ 0.53
LINC01996-201ENST00000573270 FBLN1P23142 703 aa18.34■□□□□ 0.53
LINC01996-201ENST00000573270 HAP1P54257 671 aaPredicted RBP18.33■□□□□ 0.52
LINC01996-201ENST00000573270 COL3A1P02461 1466 aaPredicted RBP18.33■□□□□ 0.52
LINC01996-201ENST00000573270 RTL1A6NKG5 1358 aa18.32■□□□□ 0.52
LINC01996-201ENST00000573270 KIAA0232Q92628 1395 aa18.32■□□□□ 0.52
LINC01996-201ENST00000573270 MYBBP1AQ9BQG0 1328 aaKnown RBP18.32■□□□□ 0.52
LINC01996-201ENST00000573270 ZBTB7CA1YPR0 619 aa18.32■□□□□ 0.52
LINC01996-201ENST00000573270 GCP02774 474 aa18.32■□□□□ 0.52
LINC01996-201ENST00000573270 RRS1Q15050 365 aaKnown RBP18.32■□□□□ 0.52
LINC01996-201ENST00000573270 RALBP1Q15311 655 aa18.32■□□□□ 0.52
LINC01996-201ENST00000573270 KCNH5Q8NCM2 988 aa18.32■□□□□ 0.52
LINC01996-201ENST00000573270 MAP3K19Q56UN5 1328 aa18.31■□□□□ 0.52
LINC01996-201ENST00000573270 PPP2R1AP30153 589 aa18.31■□□□□ 0.52
LINC01996-201ENST00000573270 EMILIN1Q9Y6C2 1016 aa18.31■□□□□ 0.52
LINC01996-201ENST00000573270 NWD2Q9ULI1 1742 aa18.31■□□□□ 0.52
LINC01996-201ENST00000573270 FAM208AQ9UK61 1670 aaKnown RBP18.31■□□□□ 0.52
LINC01996-201ENST00000573270 CPDO75976 1380 aa18.3■□□□□ 0.52
LINC01996-201ENST00000573270 SPATA31A6Q5VVP1 1343 aa18.3■□□□□ 0.52
LINC01996-201ENST00000573270 NUTM2BA6NNL0 878 aaPredicted RBP18.3■□□□□ 0.52
LINC01996-201ENST00000573270 NUTM2EB1AL46 878 aaPredicted RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms