RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 UNC5CLQ8IV45 518 aa24.94■■□□□ 1.58
SMG6-212ENST00000573153 ACEP12821 1306 aa24.93■■□□□ 1.58
SMG6-212ENST00000573153 NGDNQ8NEJ9 315 aaKnown RBP24.93■■□□□ 1.58
SMG6-212ENST00000573153 ROCK2O75116 1388 aaKnown RBP24.93■■□□□ 1.58
SMG6-212ENST00000573153 FAM83GA6ND36 823 aa24.92■■□□□ 1.58
SMG6-212ENST00000573153 GJD4Q96KN9 370 aaPredicted RBP24.92■■□□□ 1.58
SMG6-212ENST00000573153 LMOD2Q6P5Q4 547 aa24.91■■□□□ 1.58
SMG6-212ENST00000573153 PPIP5K1Q6PFW1 1433 aa24.91■■□□□ 1.58
SMG6-212ENST00000573153 COL14A1Q05707 1796 aaKnown RBP24.9■■□□□ 1.58
SMG6-212ENST00000573153 CABP2Q9NPB3 220 aa24.9■■□□□ 1.58
SMG6-212ENST00000573153 NRKQ7Z2Y5 1582 aa24.89■■□□□ 1.58
SMG6-212ENST00000573153 PLEKHG5O94827 1062 aa24.88■■□□□ 1.57
SMG6-212ENST00000573153 SSH2Q76I76 1423 aa24.87■■□□□ 1.57
SMG6-212ENST00000573153 VPS72Q15906 364 aa24.86■■□□□ 1.57
SMG6-212ENST00000573153 EP400Q96L91 3159 aa24.86■■□□□ 1.57
SMG6-212ENST00000573153 SBNO2Q9Y2G9 1366 aa24.85■■□□□ 1.57
SMG6-212ENST00000573153 BRWD3Q6RI45 1802 aa24.84■■□□□ 1.57
SMG6-212ENST00000573153 USP19O94966 1318 aa24.84■■□□□ 1.57
SMG6-212ENST00000573153 HAP1P54257 671 aaPredicted RBP24.83■■□□□ 1.57
SMG6-212ENST00000573153 SRPK2P78362 688 aaKnown RBP24.83■■□□□ 1.57
SMG6-212ENST00000573153 USP6P35125 1406 aa24.83■■□□□ 1.57
SMG6-212ENST00000573153 PAK3O75914 559 aaPredicted RBP24.82■■□□□ 1.56
SMG6-212ENST00000573153 LMO7Q8WWI1 1683 aa24.81■■□□□ 1.56
SMG6-212ENST00000573153 ONECUT3O60422 494 aaPredicted RBP24.81■■□□□ 1.56
SMG6-212ENST00000573153 ATAD2Q6PL18 1390 aa24.8■■□□□ 1.56
SMG6-212ENST00000573153 KIAA0232Q92628 1395 aa24.8■■□□□ 1.56
SMG6-212ENST00000573153 TONSLQ96HA7 1378 aa24.8■■□□□ 1.56
SMG6-212ENST00000573153 CABP1Q9NZU7 370 aa24.8■■□□□ 1.56
SMG6-212ENST00000573153 PIK3C2AO00443 1686 aa24.8■■□□□ 1.56
SMG6-212ENST00000573153 AKAP12Q02952 1782 aa24.8■■□□□ 1.56
SMG6-212ENST00000573153 EVC2Q86UK5 1308 aa24.79■■□□□ 1.56
SMG6-212ENST00000573153 BRD4O60885 1362 aaPredicted RBP24.79■■□□□ 1.56
SMG6-212ENST00000573153 NUTM2GQ5VZR2 741 aa24.78■■□□□ 1.56
SMG6-212ENST00000573153 BTG4Q9NY30 223 aa24.78■■□□□ 1.56
SMG6-212ENST00000573153 SLIT3O75094 1523 aa24.77■■□□□ 1.56
SMG6-212ENST00000573153 THSD7AQ9UPZ6 1657 aa24.77■■□□□ 1.56
SMG6-212ENST00000573153 CPSF1Q10570 1443 aaKnown RBP24.77■■□□□ 1.56
SMG6-212ENST00000573153 CPDO75976 1380 aa24.75■■□□□ 1.55
SMG6-212ENST00000573153 CD163L1Q9NR16 1453 aa24.75■■□□□ 1.55
SMG6-212ENST00000573153 CARD11Q9BXL7 1154 aa24.74■■□□□ 1.55
SMG6-212ENST00000573153 CAMTA1Q9Y6Y1 1673 aa24.74■■□□□ 1.55
SMG6-212ENST00000573153 PRDM11Q9NQV5 511 aa24.73■■□□□ 1.55
SMG6-212ENST00000573153 MON2Q7Z3U7 1717 aa24.72■■□□□ 1.55
SMG6-212ENST00000573153 SPATA31A5Q5VU36 1347 aa24.72■■□□□ 1.55
SMG6-212ENST00000573153 SPATA31A7Q8IWB4 1347 aa24.72■■□□□ 1.55
SMG6-212ENST00000573153 CHRNA2Q15822 529 aa24.72■■□□□ 1.55
SMG6-212ENST00000573153 SEPT12Q8IYM1 358 aa24.72■■□□□ 1.55
SMG6-212ENST00000573153 ABTB2Q8N961 1025 aa24.72■■□□□ 1.55
SMG6-212ENST00000573153 ZC3H6P61129 1189 aaKnown RBP24.69■■□□□ 1.54
SMG6-212ENST00000573153 COL18A1P39060 1754 aa24.68■■□□□ 1.54
SMG6-212ENST00000573153 TESK2Q96S53 571 aa24.68■■□□□ 1.54
SMG6-212ENST00000573153 USP54Q70EL1 1684 aa24.67■■□□□ 1.54
SMG6-212ENST00000573153 GCP02774 474 aa24.67■■□□□ 1.54
SMG6-212ENST00000573153 SPATA31A1Q5TZJ5 1347 aa24.66■■□□□ 1.54
SMG6-212ENST00000573153 TTC21BQ7Z4L5 1316 aa24.65■■□□□ 1.54
SMG6-212ENST00000573153 FAM98CQ17RN3 349 aaKnown RBP24.65■■□□□ 1.54
SMG6-212ENST00000573153 NLRP13Q86W25 1043 aa24.65■■□□□ 1.54
SMG6-212ENST00000573153 CCDC9Q9Y3X0 531 aaKnown RBP24.64■■□□□ 1.54
SMG6-212ENST00000573153 COL5A2P05997 1499 aaPredicted RBP24.64■■□□□ 1.53
SMG6-212ENST00000573153 NFAT5O94916 1531 aa24.63■■□□□ 1.53
SMG6-212ENST00000573153 BLMP54132 1417 aaPredicted RBP24.61■■□□□ 1.53
SMG6-212ENST00000573153 NLRP6P59044 892 aa24.6■■□□□ 1.53
SMG6-212ENST00000573153 KRT27Q7Z3Y8 459 aa24.6■■□□□ 1.53
SMG6-212ENST00000573153 ZNF692Q9BU19 519 aaPredicted RBP24.6■■□□□ 1.53
SMG6-212ENST00000573153 AATKQ6ZMQ8 1374 aa24.59■■□□□ 1.53
SMG6-212ENST00000573153 TTC21AQ8NDW8 1320 aa24.59■■□□□ 1.53
SMG6-212ENST00000573153 KTN1Q86UP2 1357 aaKnown RBP24.58■■□□□ 1.53
SMG6-212ENST00000573153 ST20-MTHFSA0A0A6YYL1 179 aa24.58■■□□□ 1.53
SMG6-212ENST00000573153 PUS7Q96PZ0 661 aaKnown RBP24.58■■□□□ 1.53
SMG6-212ENST00000573153 USP31Q70CQ4 1352 aa24.57■■□□□ 1.52
SMG6-212ENST00000573153 LARP1Q6PKG0 1096 aaKnown RBP24.57■■□□□ 1.52
SMG6-212ENST00000573153 CCDC125Q86Z20 511 aa24.57■■□□□ 1.52
SMG6-212ENST00000573153 STRN4Q9NRL3 753 aa24.57■■□□□ 1.52
SMG6-212ENST00000573153 CLSPNQ9HAW4 1339 aa24.57■■□□□ 1.52
SMG6-212ENST00000573153 SLC12A5Q9H2X9 1139 aa24.56■■□□□ 1.52
SMG6-212ENST00000573153 A0A1W2PP64 1363 aa24.55■■□□□ 1.52
SMG6-212ENST00000573153 ZRANB1Q9UGI0 708 aa24.55■■□□□ 1.52
SMG6-212ENST00000573153 BARGINQ6ZT62 677 aa24.54■■□□□ 1.52
SMG6-212ENST00000573153 TNS1Q9HBL0 1735 aaKnown RBP24.53■■□□□ 1.52
SMG6-212ENST00000573153 ARHGEF25Q86VW2 580 aa24.53■■□□□ 1.52
SMG6-212ENST00000573153 AXIN2Q9Y2T1 843 aa24.53■■□□□ 1.52
SMG6-212ENST00000573153 USP47Q96K76 1375 aa24.53■■□□□ 1.52
SMG6-212ENST00000573153 PARP4Q9UKK3 1724 aaKnown RBP24.52■■□□□ 1.52
SMG6-212ENST00000573153 FAM182BQ5T319 152 aa24.52■■□□□ 1.52
SMG6-212ENST00000573153 RGPD5Q99666 1765 aa24.52■■□□□ 1.52
SMG6-212ENST00000573153 OVOS2A0A0J9YW53 1432 aa24.52■■□□□ 1.52
SMG6-212ENST00000573153 OVOS2Q6IE36 1432 aa24.52■■□□□ 1.52
SMG6-212ENST00000573153 EDC4Q6P2E9 1401 aaKnown RBP24.52■■□□□ 1.52
SMG6-212ENST00000573153 DEFB132Q7Z7B7 95 aa24.51■■□□□ 1.51
SMG6-212ENST00000573153 CRB1P82279 1406 aa24.51■■□□□ 1.51
SMG6-212ENST00000573153 ABCC6O95255 1503 aa24.51■■□□□ 1.51
SMG6-212ENST00000573153 WNK3Q9BYP7 1800 aa24.5■■□□□ 1.51
SMG6-212ENST00000573153 NME9Q86XW9 330 aa24.5■■□□□ 1.51
SMG6-212ENST00000573153 TIMELESSQ9UNS1 1208 aa24.49■■□□□ 1.51
SMG6-212ENST00000573153 RGPD1P0DJD0 1748 aa24.48■■□□□ 1.51
SMG6-212ENST00000573153 PCGF6Q9BYE7 350 aa24.48■■□□□ 1.51
SMG6-212ENST00000573153 LRRC37A3O60309 1634 aa24.47■■□□□ 1.51
SMG6-212ENST00000573153 NINLQ9Y2I6 1382 aa24.47■■□□□ 1.51
SMG6-212ENST00000573153 A0A0G2JS52 829 aa24.47■■□□□ 1.51
SMG6-212ENST00000573153 MYT1Q01538 1121 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms