RNA–Protein interactions for RNA: ENST00000572383.1

PFN1-202, Transcript of profilin 1, humanhuman

TSL 3

Gene PFN1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-202ENST00000572383 RBM6P78332 1123 aaKnown RBP25.45■■□□□ 1.66
PFN1-202ENST00000572383 CRYBG1Q9Y4K1 1723 aa25.44■■□□□ 1.66
PFN1-202ENST00000572383 PLEKHG3A1L390 1219 aa25.44■■□□□ 1.66
PFN1-202ENST00000572383 USP21Q9UK80 565 aa25.44■■□□□ 1.66
PFN1-202ENST00000572383 ARHGEF10O15013 1369 aa25.44■■□□□ 1.66
PFN1-202ENST00000572383 BCL9LQ86UU0 1499 aa25.43■■□□□ 1.66
PFN1-202ENST00000572383 UPF1Q92900 1129 aaKnown RBP eCLIP25.43■■□□□ 1.66
PFN1-202ENST00000572383 CABP1Q9NZU7 370 aa25.43■■□□□ 1.66
PFN1-202ENST00000572383 ATRNO75882 1429 aa25.43■■□□□ 1.66
PFN1-202ENST00000572383 ACEP12821 1306 aa25.42■■□□□ 1.66
PFN1-202ENST00000572383 EIF4G2P78344 907 aaKnown RBP eCLIP25.42■■□□□ 1.66
PFN1-202ENST00000572383 POLR3AO14802 1390 aaPredicted RBP25.42■■□□□ 1.66
PFN1-202ENST00000572383 NWD2Q9ULI1 1742 aa25.41■■□□□ 1.66
PFN1-202ENST00000572383 ATAD2Q6PL18 1390 aa25.41■■□□□ 1.66
PFN1-202ENST00000572383 BRWD3Q6RI45 1802 aa25.4■■□□□ 1.66
PFN1-202ENST00000572383 SLC24A1O60721 1099 aa25.4■■□□□ 1.66
PFN1-202ENST00000572383 HSPA5P11021 654 aaKnown RBP25.4■■□□□ 1.66
PFN1-202ENST00000572383 TRPC5Q9UL62 973 aaPredicted RBP25.4■■□□□ 1.66
PFN1-202ENST00000572383 TMF1P82094 1093 aa25.39■■□□□ 1.66
PFN1-202ENST00000572383 LMOD2Q6P5Q4 547 aa25.37■■□□□ 1.65
PFN1-202ENST00000572383 SLIT2O94813 1529 aa25.37■■□□□ 1.65
PFN1-202ENST00000572383 GLI3P10071 1580 aa25.36■■□□□ 1.65
PFN1-202ENST00000572383 PUS7Q96PZ0 661 aaKnown RBP25.36■■□□□ 1.65
PFN1-202ENST00000572383 HAP1P54257 671 aaPredicted RBP25.35■■□□□ 1.65
PFN1-202ENST00000572383 NRAPQ86VF7 1730 aa25.34■■□□□ 1.65
PFN1-202ENST00000572383 PAK3O75914 559 aaPredicted RBP25.34■■□□□ 1.65
PFN1-202ENST00000572383 TMC1Q8TDI8 760 aa25.33■■□□□ 1.65
PFN1-202ENST00000572383 CABLES1Q8TDN4 633 aa25.33■■□□□ 1.65
PFN1-202ENST00000572383 SLC12A5Q9H2X9 1139 aa25.31■■□□□ 1.64
PFN1-202ENST00000572383 EP400Q96L91 3159 aa25.3■■□□□ 1.64
PFN1-202ENST00000572383 USP6P35125 1406 aa25.29■■□□□ 1.64
PFN1-202ENST00000572383 UNC5CLQ8IV45 518 aa25.29■■□□□ 1.64
PFN1-202ENST00000572383 CPSF1Q10570 1443 aaKnown RBP25.29■■□□□ 1.64
PFN1-202ENST00000572383 AKAP12Q02952 1782 aa25.28■■□□□ 1.64
PFN1-202ENST00000572383 CD163L1Q9NR16 1453 aa25.28■■□□□ 1.64
PFN1-202ENST00000572383 PHRF1Q9P1Y6 1649 aaKnown RBP25.28■■□□□ 1.64
PFN1-202ENST00000572383 PLEKHG5O94827 1062 aa25.28■■□□□ 1.64
PFN1-202ENST00000572383 CDCA8Q53HL2 280 aa25.28■■□□□ 1.64
PFN1-202ENST00000572383 COL14A1Q05707 1796 aaKnown RBP25.27■■□□□ 1.64
PFN1-202ENST00000572383 ZNF692Q9BU19 519 aaPredicted RBP25.27■■□□□ 1.64
PFN1-202ENST00000572383 GJD4Q96KN9 370 aaPredicted RBP25.26■■□□□ 1.63
PFN1-202ENST00000572383 KTN1Q86UP2 1357 aaKnown RBP25.25■■□□□ 1.63
PFN1-202ENST00000572383 SSH2Q76I76 1423 aa25.25■■□□□ 1.63
PFN1-202ENST00000572383 BRD4O60885 1362 aaPredicted RBP25.24■■□□□ 1.63
PFN1-202ENST00000572383 NINLQ9Y2I6 1382 aa25.24■■□□□ 1.63
PFN1-202ENST00000572383 NUTM2GQ5VZR2 741 aa25.23■■□□□ 1.63
PFN1-202ENST00000572383 HDGFL2Q7Z4V5 671 aaPredicted RBP25.23■■□□□ 1.63
PFN1-202ENST00000572383 MON2Q7Z3U7 1717 aa25.23■■□□□ 1.63
PFN1-202ENST00000572383 A0A1W2PP64 1363 aa25.22■■□□□ 1.63
PFN1-202ENST00000572383 ABTB2Q8N961 1025 aa25.22■■□□□ 1.63
PFN1-202ENST00000572383 TERF2IPQ9NYB0 399 aa25.22■■□□□ 1.63
PFN1-202ENST00000572383 NRKQ7Z2Y5 1582 aa25.22■■□□□ 1.63
PFN1-202ENST00000572383 C11orf95C9JLR9 678 aaPredicted RBP25.21■■□□□ 1.63
PFN1-202ENST00000572383 POLR3GLQ9BT43 218 aa25.21■■□□□ 1.63
PFN1-202ENST00000572383 TTC21BQ7Z4L5 1316 aa25.2■■□□□ 1.62
PFN1-202ENST00000572383 FAM83GA6ND36 823 aa25.2■■□□□ 1.62
PFN1-202ENST00000572383 MYOM1P52179 1685 aa25.2■■□□□ 1.62
PFN1-202ENST00000572383 VPS72Q15906 364 aa25.19■■□□□ 1.62
PFN1-202ENST00000572383 PIK3C2AO00443 1686 aa25.17■■□□□ 1.62
PFN1-202ENST00000572383 ANKRD36BQ8N2N9 1353 aa25.17■■□□□ 1.62
PFN1-202ENST00000572383 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.16■■□□□ 1.62
PFN1-202ENST00000572383 TTC21AQ8NDW8 1320 aa25.15■■□□□ 1.62
PFN1-202ENST00000572383 EDC4Q6P2E9 1401 aaKnown RBP25.15■■□□□ 1.62
PFN1-202ENST00000572383 NLRP6P59044 892 aa25.14■■□□□ 1.62
PFN1-202ENST00000572383 NLRP13Q86W25 1043 aa25.14■■□□□ 1.62
PFN1-202ENST00000572383 BTG4Q9NY30 223 aa25.13■■□□□ 1.61
PFN1-202ENST00000572383 PRDM11Q9NQV5 511 aa25.12■■□□□ 1.61
PFN1-202ENST00000572383 USP19O94966 1318 aa25.12■■□□□ 1.61
PFN1-202ENST00000572383 ZEB1P37275 1124 aaPredicted RBP25.11■■□□□ 1.61
PFN1-202ENST00000572383 CCDC9Q9Y3X0 531 aaKnown RBP25.11■■□□□ 1.61
PFN1-202ENST00000572383 KIF7Q2M1P5 1343 aa25.11■■□□□ 1.61
PFN1-202ENST00000572383 KIAA0232Q92628 1395 aa25.1■■□□□ 1.61
PFN1-202ENST00000572383 NME9Q86XW9 330 aa25.1■■□□□ 1.61
PFN1-202ENST00000572383 ZRANB1Q9UGI0 708 aa25.1■■□□□ 1.61
PFN1-202ENST00000572383 ONECUT3O60422 494 aaPredicted RBP25.09■■□□□ 1.61
PFN1-202ENST00000572383 THSD7AQ9UPZ6 1657 aa25.07■■□□□ 1.6
PFN1-202ENST00000572383 CARD14Q9BXL6 1004 aa25.07■■□□□ 1.6
PFN1-202ENST00000572383 SLIT3O75094 1523 aa25.07■■□□□ 1.6
PFN1-202ENST00000572383 GCP02774 474 aa25.06■■□□□ 1.6
PFN1-202ENST00000572383 ZC3H6P61129 1189 aaKnown RBP25.06■■□□□ 1.6
PFN1-202ENST00000572383 SEPT12Q8IYM1 358 aa25.06■■□□□ 1.6
PFN1-202ENST00000572383 LMO7Q8WWI1 1683 aa25.06■■□□□ 1.6
PFN1-202ENST00000572383 USP31Q70CQ4 1352 aa25.05■■□□□ 1.6
PFN1-202ENST00000572383 CPDO75976 1380 aa25.04■■□□□ 1.6
PFN1-202ENST00000572383 NSD3Q9BZ95 1437 aa25.03■■□□□ 1.6
PFN1-202ENST00000572383 USP54Q70EL1 1684 aa25.03■■□□□ 1.6
PFN1-202ENST00000572383 CHRNA2Q15822 529 aa25.02■■□□□ 1.6
PFN1-202ENST00000572383 CCDC125Q86Z20 511 aa25.02■■□□□ 1.6
PFN1-202ENST00000572383 PANK3Q9H999 370 aa25.02■■□□□ 1.6
PFN1-202ENST00000572383 SPATA31A5Q5VU36 1347 aa25.02■■□□□ 1.6
PFN1-202ENST00000572383 WASHC2AQ641Q2 1341 aa25.02■■□□□ 1.6
PFN1-202ENST00000572383 SPATA31A7Q8IWB4 1347 aa25.02■■□□□ 1.6
PFN1-202ENST00000572383 CCDC7Q96M83 1385 aa25.02■■□□□ 1.6
PFN1-202ENST00000572383 SOX12O15370 315 aa25.01■■□□□ 1.59
PFN1-202ENST00000572383 RGPD5Q99666 1765 aa25■■□□□ 1.59
PFN1-202ENST00000572383 OVOS2A0A0J9YW53 1432 aa25■■□□□ 1.59
PFN1-202ENST00000572383 OVOS2Q6IE36 1432 aa25■■□□□ 1.59
PFN1-202ENST00000572383 FYB1O15117 783 aa24.99■■□□□ 1.59
PFN1-202ENST00000572383 RGPD1P0DJD0 1748 aa24.99■■□□□ 1.59
PFN1-202ENST00000572383 KCNH5Q8NCM2 988 aa24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms