RNA–Protein interactions for RNA: ENST00000572353.1

LINC01978-201, Transcript of long intergenic non-protein coding RNA 1978, humanhuman

TSL 2

Gene LINC01978, Length 540 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01978-201ENST00000572353 MTHFSP49914 203 aa16.52■□□□□ 0.24
LINC01978-201ENST00000572353 ESCO1Q5FWF5 840 aa16.52■□□□□ 0.24
LINC01978-201ENST00000572353 C19orf44Q9H6X5 657 aa16.52■□□□□ 0.24
LINC01978-201ENST00000572353 SSH2Q76I76 1423 aa16.52■□□□□ 0.23
LINC01978-201ENST00000572353 ANKRD26Q9UPS8 1709 aa16.51■□□□□ 0.23
LINC01978-201ENST00000572353 ORAI2Q96SN7 254 aa16.51■□□□□ 0.23
LINC01978-201ENST00000572353 LRRC7Q96NW7 1537 aa16.5■□□□□ 0.23
LINC01978-201ENST00000572353 C1orf167Q5SNV9 1468 aa16.49■□□□□ 0.23
LINC01978-201ENST00000572353 ATF3P18847 181 aa16.49■□□□□ 0.23
LINC01978-201ENST00000572353 WDR43Q15061 677 aaKnown RBP eCLIP16.49■□□□□ 0.23
LINC01978-201ENST00000572353 COG3Q96JB2 828 aa16.49■□□□□ 0.23
LINC01978-201ENST00000572353 NCOA3Q9Y6Q9 1424 aa16.48■□□□□ 0.23
LINC01978-201ENST00000572353 ADAMTS8Q9UP79 889 aa16.48■□□□□ 0.23
LINC01978-201ENST00000572353 MST1RQ04912 1400 aa16.47■□□□□ 0.23
LINC01978-201ENST00000572353 MSH6P52701 1360 aa16.47■□□□□ 0.23
LINC01978-201ENST00000572353 TTC21AQ8NDW8 1320 aa16.46■□□□□ 0.23
LINC01978-201ENST00000572353 OVOS2A0A0J9YW53 1432 aa16.46■□□□□ 0.23
LINC01978-201ENST00000572353 OVOS2Q6IE36 1432 aa16.46■□□□□ 0.23
LINC01978-201ENST00000572353 XPCQ01831 940 aaPredicted RBP16.46■□□□□ 0.23
LINC01978-201ENST00000572353 NUTM2GQ5VZR2 741 aa16.46■□□□□ 0.23
LINC01978-201ENST00000572353 DMRT2Q9Y5R5 561 aa16.46■□□□□ 0.23
LINC01978-201ENST00000572353 DCCP43146 1447 aa16.45■□□□□ 0.22
LINC01978-201ENST00000572353 BLMP54132 1417 aaPredicted RBP16.45■□□□□ 0.22
LINC01978-201ENST00000572353 PAK3O75914 559 aaPredicted RBP16.45■□□□□ 0.22
LINC01978-201ENST00000572353 CFAP53Q96M91 514 aa16.45■□□□□ 0.22
LINC01978-201ENST00000572353 SCAF1Q9H7N4 1312 aaKnown RBP16.45■□□□□ 0.22
LINC01978-201ENST00000572353 SOX12O15370 315 aa16.44■□□□□ 0.22
LINC01978-201ENST00000572353 POLKQ9UBT6 870 aa16.44■□□□□ 0.22
LINC01978-201ENST00000572353 EMILIN1Q9Y6C2 1016 aa16.44■□□□□ 0.22
LINC01978-201ENST00000572353 XIRP1Q702N8 1843 aaKnown RBP16.44■□□□□ 0.22
LINC01978-201ENST00000572353 COL3A1P02461 1466 aaPredicted RBP16.43■□□□□ 0.22
LINC01978-201ENST00000572353 PPM1GO15355 546 aaPredicted RBP16.43■□□□□ 0.22
LINC01978-201ENST00000572353 FOXO3O43524 673 aa16.43■□□□□ 0.22
LINC01978-201ENST00000572353 PSME1Q06323 249 aa16.43■□□□□ 0.22
LINC01978-201ENST00000572353 RRS1Q15050 365 aaKnown RBP16.43■□□□□ 0.22
LINC01978-201ENST00000572353 CADPS2Q86UW7 1296 aa16.43■□□□□ 0.22
LINC01978-201ENST00000572353 PIK3C2AO00443 1686 aa16.43■□□□□ 0.22
LINC01978-201ENST00000572353 CCDC146Q8IYE0 955 aa16.42■□□□□ 0.22
LINC01978-201ENST00000572353 SALL2Q9Y467 1007 aaPredicted RBP16.42■□□□□ 0.22
LINC01978-201ENST00000572353 SHPRHQ149N8 1683 aa16.42■□□□□ 0.22
LINC01978-201ENST00000572353 ZBED9Q6R2W3 1325 aa16.42■□□□□ 0.22
LINC01978-201ENST00000572353 AATKQ6ZMQ8 1374 aa16.41■□□□□ 0.22
LINC01978-201ENST00000572353 USP31Q70CQ4 1352 aa16.41■□□□□ 0.22
LINC01978-201ENST00000572353 DDX17Q92841 729 aaKnown RBP16.41■□□□□ 0.22
LINC01978-201ENST00000572353 INSRP06213 1382 aa16.4■□□□□ 0.22
LINC01978-201ENST00000572353 NLRP6P59044 892 aa16.4■□□□□ 0.22
LINC01978-201ENST00000572353 SMG6Q86US8 1419 aaKnown RBP16.39■□□□□ 0.21
LINC01978-201ENST00000572353 KRT28Q7Z3Y7 464 aa16.39■□□□□ 0.21
LINC01978-201ENST00000572353 ABTB2Q8N961 1025 aa16.39■□□□□ 0.21
LINC01978-201ENST00000572353 KIF1AQ12756 1690 aa16.39■□□□□ 0.21
LINC01978-201ENST00000572353 PNPLA6Q8IY17 1366 aa16.38■□□□□ 0.21
LINC01978-201ENST00000572353 CDK12Q9NYV4 1490 aaPredicted RBP16.37■□□□□ 0.21
LINC01978-201ENST00000572353 U2SURPO15042 1029 aaKnown RBP16.37■□□□□ 0.21
LINC01978-201ENST00000572353 PLEKHG5O94827 1062 aa16.37■□□□□ 0.21
LINC01978-201ENST00000572353 DIAPH1O60610 1272 aaKnown RBP16.36■□□□□ 0.21
LINC01978-201ENST00000572353 U2AF1L5P0DN76 240 aaPredicted RBP16.36■□□□□ 0.21
LINC01978-201ENST00000572353 U2AF1Q01081 240 aaKnown RBP eCLIP16.36■□□□□ 0.21
LINC01978-201ENST00000572353 LMOD2Q6P5Q4 547 aa16.35■□□□□ 0.21
LINC01978-201ENST00000572353 BRINP3Q76B58 766 aa16.35■□□□□ 0.21
LINC01978-201ENST00000572353 MARF1Q9Y4F3 1742 aaKnown RBP16.35■□□□□ 0.21
LINC01978-201ENST00000572353 MAP3K19Q56UN5 1328 aa16.35■□□□□ 0.21
LINC01978-201ENST00000572353 NUDCQ9Y266 331 aa16.34■□□□□ 0.21
LINC01978-201ENST00000572353 PEAK1Q9H792 1746 aa16.33■□□□□ 0.21
LINC01978-201ENST00000572353 TRPM3Q9HCF6 1732 aaPredicted RBP16.33■□□□□ 0.21
LINC01978-201ENST00000572353 APAF1O14727 1248 aa16.33■□□□□ 0.2
LINC01978-201ENST00000572353 SLAIN2Q9P270 581 aa16.33■□□□□ 0.2
LINC01978-201ENST00000572353 LTBP4Q8N2S1 1624 aa16.33■□□□□ 0.2
LINC01978-201ENST00000572353 IL13P35225 146 aa16.32■□□□□ 0.2
LINC01978-201ENST00000572353 USP54Q70EL1 1684 aa16.32■□□□□ 0.2
LINC01978-201ENST00000572353 MAP2P11137 1827 aaKnown RBP16.31■□□□□ 0.2
LINC01978-201ENST00000572353 NPHP3Q7Z494 1330 aa16.31■□□□□ 0.2
LINC01978-201ENST00000572353 PXDNQ92626 1479 aa16.3■□□□□ 0.2
LINC01978-201ENST00000572353 EIF4A2Q14240 407 aaKnown RBP16.3■□□□□ 0.2
LINC01978-201ENST00000572353 HSP90AB2PQ58FF8 381 aa16.3■□□□□ 0.2
LINC01978-201ENST00000572353 RUNDC1Q96C34 613 aa16.3■□□□□ 0.2
LINC01978-201ENST00000572353 RRP7AQ9Y3A4 280 aaKnown RBP16.3■□□□□ 0.2
LINC01978-201ENST00000572353 NFAT5O94916 1531 aa16.29■□□□□ 0.2
LINC01978-201ENST00000572353 SBNO1A3KN83 1393 aa16.29■□□□□ 0.2
LINC01978-201ENST00000572353 ZBTB7CA1YPR0 619 aa16.29■□□□□ 0.2
LINC01978-201ENST00000572353 AMPHP49418 695 aa16.29■□□□□ 0.2
LINC01978-201ENST00000572353 AEBP2Q6ZN18 517 aaPredicted RBP16.29■□□□□ 0.2
LINC01978-201ENST00000572353 IQSEC2Q5JU85 1478 aa16.29■□□□□ 0.2
LINC01978-201ENST00000572353 HMOX1P09601 288 aa16.28■□□□□ 0.2
LINC01978-201ENST00000572353 FLT4P35916 1363 aa16.27■□□□□ 0.2
LINC01978-201ENST00000572353 USP19O94966 1318 aa16.27■□□□□ 0.2
LINC01978-201ENST00000572353 TCP11L2Q8N4U5 519 aa16.27■□□□□ 0.2
LINC01978-201ENST00000572353 CDCA7LQ96GN5 454 aa16.27■□□□□ 0.2
LINC01978-201ENST00000572353 SLIT3O75094 1523 aa16.27■□□□□ 0.2
LINC01978-201ENST00000572353 TNS3Q68CZ2 1445 aa16.27■□□□□ 0.19
LINC01978-201ENST00000572353 PLEKHF1Q96S99 279 aa16.26■□□□□ 0.19
LINC01978-201ENST00000572353 RSPH6AQ9H0K4 717 aa16.26■□□□□ 0.19
LINC01978-201ENST00000572353 ALS2Q96Q42 1657 aa16.26■□□□□ 0.19
LINC01978-201ENST00000572353 SPATA31A3Q5VYP0 1347 aa16.25■□□□□ 0.19
LINC01978-201ENST00000572353 GCP02774 474 aa16.25■□□□□ 0.19
LINC01978-201ENST00000572353 HOXC9P31274 260 aa16.25■□□□□ 0.19
LINC01978-201ENST00000572353 PRKAR2BP31323 418 aa16.25■□□□□ 0.19
LINC01978-201ENST00000572353 NEUROD2Q15784 382 aa16.25■□□□□ 0.19
LINC01978-201ENST00000572353 MED1Q15648 1581 aaPredicted RBP16.25■□□□□ 0.19
LINC01978-201ENST00000572353 ZNF521Q96K83 1311 aa16.24■□□□□ 0.19
LINC01978-201ENST00000572353 AEBP1Q8IUX7 1158 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms