RNA–Protein interactions for RNA: ENST00000571739.5

TRAPPC1-203, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-203ENST00000571739 POTEAQ6S8J7 498 aa12.19□□□□□ -0.46
TRAPPC1-203ENST00000571739 PHF23Q9BUL5 403 aaPredicted RBP12.19□□□□□ -0.46
TRAPPC1-203ENST00000571739 ITSN1Q15811 1721 aa12.19□□□□□ -0.46
TRAPPC1-203ENST00000571739 SSH2Q76I76 1423 aa12.19□□□□□ -0.46
TRAPPC1-203ENST00000571739 C11orf95C9JLR9 678 aaPredicted RBP12.18□□□□□ -0.46
TRAPPC1-203ENST00000571739 ABTB2Q8N961 1025 aa12.18□□□□□ -0.46
TRAPPC1-203ENST00000571739 C8orf37Q96NL8 207 aa12.18□□□□□ -0.46
TRAPPC1-203ENST00000571739 USP6P35125 1406 aa12.18□□□□□ -0.46
TRAPPC1-203ENST00000571739 COL22A1Q8NFW1 1626 aaPredicted RBP12.18□□□□□ -0.46
TRAPPC1-203ENST00000571739 ARHGEF10O15013 1369 aa12.18□□□□□ -0.46
TRAPPC1-203ENST00000571739 CD163L1Q9NR16 1453 aa12.17□□□□□ -0.46
TRAPPC1-203ENST00000571739 NGLY1Q96IV0 654 aa12.17□□□□□ -0.46
TRAPPC1-203ENST00000571739 ALS2Q96Q42 1657 aa12.16□□□□□ -0.46
TRAPPC1-203ENST00000571739 TTC21BQ7Z4L5 1316 aa12.16□□□□□ -0.46
TRAPPC1-203ENST00000571739 FAM83GA6ND36 823 aa12.16□□□□□ -0.46
TRAPPC1-203ENST00000571739 FNBP4Q8N3X1 1017 aaPredicted RBP12.16□□□□□ -0.46
TRAPPC1-203ENST00000571739 BRD4O60885 1362 aaPredicted RBP12.16□□□□□ -0.46
TRAPPC1-203ENST00000571739 AFF2P51816 1311 aa12.15□□□□□ -0.46
TRAPPC1-203ENST00000571739 NLRP6P59044 892 aa12.15□□□□□ -0.46
TRAPPC1-203ENST00000571739 KTN1Q86UP2 1357 aaKnown RBP12.15□□□□□ -0.46
TRAPPC1-203ENST00000571739 CDCA8Q53HL2 280 aa12.14□□□□□ -0.47
TRAPPC1-203ENST00000571739 NLRP13Q86W25 1043 aa12.14□□□□□ -0.47
TRAPPC1-203ENST00000571739 TERF2IPQ9NYB0 399 aa12.14□□□□□ -0.47
TRAPPC1-203ENST00000571739 ZRANB1Q9UGI0 708 aa12.14□□□□□ -0.47
TRAPPC1-203ENST00000571739 HAP1P54257 671 aaPredicted RBP12.13□□□□□ -0.47
TRAPPC1-203ENST00000571739 ZNF772Q68DY9 489 aaPredicted RBP12.13□□□□□ -0.47
TRAPPC1-203ENST00000571739 HDGFL2Q7Z4V5 671 aaPredicted RBP12.13□□□□□ -0.47
TRAPPC1-203ENST00000571739 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.13□□□□□ -0.47
TRAPPC1-203ENST00000571739 USP21Q9UK80 565 aa12.13□□□□□ -0.47
TRAPPC1-203ENST00000571739 A0A1W2PP64 1363 aa12.13□□□□□ -0.47
TRAPPC1-203ENST00000571739 GCP02774 474 aa12.12□□□□□ -0.47
TRAPPC1-203ENST00000571739 NME9Q86XW9 330 aa12.12□□□□□ -0.47
TRAPPC1-203ENST00000571739 CARD14Q9BXL6 1004 aa12.12□□□□□ -0.47
TRAPPC1-203ENST00000571739 QTRT2Q9H974 415 aaKnown RBP12.12□□□□□ -0.47
TRAPPC1-203ENST00000571739 USP19O94966 1318 aa12.11□□□□□ -0.47
TRAPPC1-203ENST00000571739 TTC21AQ8NDW8 1320 aa12.11□□□□□ -0.47
TRAPPC1-203ENST00000571739 AKAP12Q02952 1782 aa12.11□□□□□ -0.47
TRAPPC1-203ENST00000571739 BCL9LQ86UU0 1499 aa12.11□□□□□ -0.47
TRAPPC1-203ENST00000571739 NINLQ9Y2I6 1382 aa12.11□□□□□ -0.47
TRAPPC1-203ENST00000571739 ZC3H6P61129 1189 aaKnown RBP12.11□□□□□ -0.47
TRAPPC1-203ENST00000571739 POLR3GLQ9BT43 218 aa12.1□□□□□ -0.47
TRAPPC1-203ENST00000571739 USP31Q70CQ4 1352 aa12.09□□□□□ -0.47
TRAPPC1-203ENST00000571739 ANKRD36BQ8N2N9 1353 aa12.09□□□□□ -0.47
TRAPPC1-203ENST00000571739 CHRNA2Q15822 529 aa12.09□□□□□ -0.47
TRAPPC1-203ENST00000571739 UNC5CLQ8IV45 518 aa12.09□□□□□ -0.47
TRAPPC1-203ENST00000571739 SLIT2O94813 1529 aa12.09□□□□□ -0.47
TRAPPC1-203ENST00000571739 CRYBG1Q9Y4K1 1723 aa12.08□□□□□ -0.47
TRAPPC1-203ENST00000571739 KIAA0232Q92628 1395 aa12.08□□□□□ -0.48
TRAPPC1-203ENST00000571739 FYB1O15117 783 aa12.08□□□□□ -0.48
TRAPPC1-203ENST00000571739 TRPC5Q9UL62 973 aaPredicted RBP12.08□□□□□ -0.48
TRAPPC1-203ENST00000571739 EDC4Q6P2E9 1401 aaKnown RBP12.08□□□□□ -0.48
TRAPPC1-203ENST00000571739 MON2Q7Z3U7 1717 aa12.08□□□□□ -0.48
TRAPPC1-203ENST00000571739 MARF1Q9Y4F3 1742 aaKnown RBP12.08□□□□□ -0.48
TRAPPC1-203ENST00000571739 RXRBP28702 533 aa12.07□□□□□ -0.48
TRAPPC1-203ENST00000571739 ABCA3Q99758 1704 aa12.07□□□□□ -0.48
TRAPPC1-203ENST00000571739 PRDM11Q9NQV5 511 aa12.07□□□□□ -0.48
TRAPPC1-203ENST00000571739 BTG4Q9NY30 223 aa12.07□□□□□ -0.48
TRAPPC1-203ENST00000571739 KIF7Q2M1P5 1343 aa12.07□□□□□ -0.48
TRAPPC1-203ENST00000571739 PIK3C2AO00443 1686 aa12.06□□□□□ -0.48
TRAPPC1-203ENST00000571739 NRKQ7Z2Y5 1582 aa12.06□□□□□ -0.48
TRAPPC1-203ENST00000571739 FBLN1P23142 703 aa12.06□□□□□ -0.48
TRAPPC1-203ENST00000571739 RBM6P78332 1123 aaKnown RBP12.06□□□□□ -0.48
TRAPPC1-203ENST00000571739 ARHGEF25Q86VW2 580 aa12.06□□□□□ -0.48
TRAPPC1-203ENST00000571739 GJD4Q96KN9 370 aaPredicted RBP12.06□□□□□ -0.48
TRAPPC1-203ENST00000571739 PANK3Q9H999 370 aa12.06□□□□□ -0.48
TRAPPC1-203ENST00000571739 CPDO75976 1380 aa12.05□□□□□ -0.48
TRAPPC1-203ENST00000571739 SOX12O15370 315 aa12.05□□□□□ -0.48
TRAPPC1-203ENST00000571739 KCNH5Q8NCM2 988 aa12.05□□□□□ -0.48
TRAPPC1-203ENST00000571739 GGNBP2Q9H3C7 697 aa12.05□□□□□ -0.48
TRAPPC1-203ENST00000571739 AXIN2Q9Y2T1 843 aa12.05□□□□□ -0.48
TRAPPC1-203ENST00000571739 PHRF1Q9P1Y6 1649 aaKnown RBP12.04□□□□□ -0.48
TRAPPC1-203ENST00000571739 ATRNO75882 1429 aa12.04□□□□□ -0.48
TRAPPC1-203ENST00000571739 VPS72Q15906 364 aa12.04□□□□□ -0.48
TRAPPC1-203ENST00000571739 SLIT3O75094 1523 aa12.04□□□□□ -0.48
TRAPPC1-203ENST00000571739 WASHC2AQ641Q2 1341 aa12.03□□□□□ -0.48
TRAPPC1-203ENST00000571739 MYOM1P52179 1685 aa12.03□□□□□ -0.48
TRAPPC1-203ENST00000571739 ZBTB7CA1YPR0 619 aa12.02□□□□□ -0.49
TRAPPC1-203ENST00000571739 COG3Q96JB2 828 aa12.02□□□□□ -0.49
TRAPPC1-203ENST00000571739 STRN4Q9NRL3 753 aa12.02□□□□□ -0.49
TRAPPC1-203ENST00000571739 CAMTA1Q9Y6Y1 1673 aa12.02□□□□□ -0.49
TRAPPC1-203ENST00000571739 AATKQ6ZMQ8 1374 aa12.02□□□□□ -0.49
TRAPPC1-203ENST00000571739 OVOS2A0A0J9YW53 1432 aa12.02□□□□□ -0.49
TRAPPC1-203ENST00000571739 OVOS2Q6IE36 1432 aa12.02□□□□□ -0.49
TRAPPC1-203ENST00000571739 COL14A1Q05707 1796 aaKnown RBP12.01□□□□□ -0.49
TRAPPC1-203ENST00000571739 PER1O15534 1290 aaPredicted RBP12.01□□□□□ -0.49
TRAPPC1-203ENST00000571739 ONECUT3O60422 494 aaPredicted RBP12.01□□□□□ -0.49
TRAPPC1-203ENST00000571739 EVA1CP58658 441 aa12.01□□□□□ -0.49
TRAPPC1-203ENST00000571739 NSD3Q9BZ95 1437 aa12.01□□□□□ -0.49
TRAPPC1-203ENST00000571739 LARP1Q6PKG0 1096 aaKnown RBP12□□□□□ -0.49
TRAPPC1-203ENST00000571739 CCDC9Q9Y3X0 531 aaKnown RBP12□□□□□ -0.49
TRAPPC1-203ENST00000571739 SPATA31A5Q5VU36 1347 aa12□□□□□ -0.49
TRAPPC1-203ENST00000571739 SPATA31A7Q8IWB4 1347 aa12□□□□□ -0.49
TRAPPC1-203ENST00000571739 CCDC7Q96M83 1385 aa12□□□□□ -0.49
TRAPPC1-203ENST00000571739 PLCH1Q4KWH8 1693 aa12□□□□□ -0.49
TRAPPC1-203ENST00000571739 NFAT5O94916 1531 aa11.99□□□□□ -0.49
TRAPPC1-203ENST00000571739 NWD2Q9ULI1 1742 aa11.99□□□□□ -0.49
TRAPPC1-203ENST00000571739 COL18A1P39060 1754 aa11.99□□□□□ -0.49
TRAPPC1-203ENST00000571739 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.98□□□□□ -0.49
TRAPPC1-203ENST00000571739 USP54Q70EL1 1684 aa11.98□□□□□ -0.49
TRAPPC1-203ENST00000571739 LMO7Q8WWI1 1683 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms