RNA–Protein interactions for RNA: ENST00000571643.5

CDC27-213, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-213ENST00000571643 SMPD1P17405 629 aa7.98□□□□□ -1.13
CDC27-213ENST00000571643 CTHP32929 405 aa7.98□□□□□ -1.13
CDC27-213ENST00000571643 EHBP1Q8NDI1 1231 aa7.98□□□□□ -1.13
CDC27-213ENST00000571643 MRGPRX2Q96LB1 330 aa7.98□□□□□ -1.13
CDC27-213ENST00000571643 FAM117AQ9C073 453 aa7.98□□□□□ -1.13
CDC27-213ENST00000571643 DACH1Q9UI36 760 aa7.98□□□□□ -1.13
CDC27-213ENST00000571643 SKOR1P84550 965 aa7.97□□□□□ -1.13
CDC27-213ENST00000571643 NEUROD2Q15784 382 aa7.97□□□□□ -1.13
CDC27-213ENST00000571643 PTCRAQ6ISU1 281 aaPredicted RBP7.97□□□□□ -1.13
CDC27-213ENST00000571643 ARMC2Q8NEN0 867 aa7.97□□□□□ -1.13
CDC27-213ENST00000571643 POLR3EQ9NVU0 708 aa7.97□□□□□ -1.13
CDC27-213ENST00000571643 GMPR2Q9P2T1 348 aaKnown RBP7.97□□□□□ -1.13
CDC27-213ENST00000571643 F12P00748 615 aaPredicted RBP7.96□□□□□ -1.14
CDC27-213ENST00000571643 ZNF511Q8NB15 262 aa7.96□□□□□ -1.14
CDC27-213ENST00000571643 GOPCQ9HD26 462 aa7.96□□□□□ -1.14
CDC27-213ENST00000571643 ATP1B4Q9UN42 357 aaPredicted RBP7.96□□□□□ -1.14
CDC27-213ENST00000571643 SH3BP2P78314 561 aa7.95□□□□□ -1.14
CDC27-213ENST00000571643 PLEKHG3A1L390 1219 aa7.94□□□□□ -1.14
CDC27-213ENST00000571643 VARSP26640 1264 aaKnown RBP7.94□□□□□ -1.14
CDC27-213ENST00000571643 TPRNQ4KMQ1 711 aa7.94□□□□□ -1.14
CDC27-213ENST00000571643 NBPF14Q5TI25 921 aa7.94□□□□□ -1.14
CDC27-213ENST00000571643 PPP2R2DQ66LE6 453 aa7.94□□□□□ -1.14
CDC27-213ENST00000571643 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.94□□□□□ -1.14
CDC27-213ENST00000571643 C11orf95C9JLR9 678 aaPredicted RBP7.93□□□□□ -1.14
CDC27-213ENST00000571643 WIPF1O43516 503 aa7.93□□□□□ -1.14
CDC27-213ENST00000571643 NFX1Q12986 1120 aaKnown RBP7.93□□□□□ -1.14
CDC27-213ENST00000571643 LINC01559Q495D7 138 aa7.93□□□□□ -1.14
CDC27-213ENST00000571643 RTL5Q5HYW3 569 aaPredicted RBP7.93□□□□□ -1.14
CDC27-213ENST00000571643 BAP1Q92560 729 aa7.93□□□□□ -1.14
CDC27-213ENST00000571643 GPKOWQ92917 476 aaPredicted RBP eCLIP7.93□□□□□ -1.14
CDC27-213ENST00000571643 MAP10Q9P2G4 905 aa7.93□□□□□ -1.14
CDC27-213ENST00000571643 MPNDQ8N594 471 aa7.92□□□□□ -1.14
CDC27-213ENST00000571643 TRIM47Q96LD4 638 aa7.92□□□□□ -1.14
CDC27-213ENST00000571643 PCMTD1Q96MG8 357 aaPredicted RBP7.92□□□□□ -1.14
CDC27-213ENST00000571643 ATP13A2Q9NQ11 1180 aa7.92□□□□□ -1.14
CDC27-213ENST00000571643 WFS1O76024 890 aa7.91□□□□□ -1.14
CDC27-213ENST00000571643 FAM174AQ8TBP5 190 aa7.91□□□□□ -1.14
CDC27-213ENST00000571643 SENP2Q9HC62 589 aa7.91□□□□□ -1.14
CDC27-213ENST00000571643 WASF2Q9Y6W5 498 aa7.91□□□□□ -1.14
CDC27-213ENST00000571643 J3QL48 77 aa7.9□□□□□ -1.14
CDC27-213ENST00000571643 PER1O15534 1290 aaPredicted RBP7.9□□□□□ -1.14
CDC27-213ENST00000571643 ALDH1A1P00352 501 aa7.9□□□□□ -1.14
CDC27-213ENST00000571643 BPHLQ86WA6 291 aaPredicted RBP7.9□□□□□ -1.14
CDC27-213ENST00000571643 PNMA1Q8ND90 353 aa7.9□□□□□ -1.14
CDC27-213ENST00000571643 ZC3H4Q9UPT8 1303 aaKnown RBP7.89□□□□□ -1.15
CDC27-213ENST00000571643 SIAH2O43255 324 aa7.89□□□□□ -1.15
CDC27-213ENST00000571643 BRPF1P55201 1214 aaPredicted RBP7.88□□□□□ -1.15
CDC27-213ENST00000571643 AGERQ15109 404 aa7.88□□□□□ -1.15
CDC27-213ENST00000571643 PROCA1Q8NCQ7 364 aaPredicted RBP7.88□□□□□ -1.15
CDC27-213ENST00000571643 KIFC2Q96AC6 838 aa7.88□□□□□ -1.15
CDC27-213ENST00000571643 HPS1Q92902 700 aa7.87□□□□□ -1.15
CDC27-213ENST00000571643 CTDSPL2Q05D32 466 aa7.86□□□□□ -1.15
CDC27-213ENST00000571643 AP1G2O75843 785 aa7.85□□□□□ -1.15
CDC27-213ENST00000571643 SNRPBP14678 240 aaKnown RBP7.85□□□□□ -1.15
CDC27-213ENST00000571643 LCE2CQ5TA81 110 aa7.85□□□□□ -1.15
CDC27-213ENST00000571643 STK17AQ9UEE5 414 aa7.85□□□□□ -1.15
CDC27-213ENST00000571643 TLL2Q9Y6L7 1015 aa7.85□□□□□ -1.15
CDC27-213ENST00000571643 RFC5P40937 340 aa7.84□□□□□ -1.15
CDC27-213ENST00000571643 TMEM259Q4ZIN3 620 aa7.84□□□□□ -1.15
CDC27-213ENST00000571643 CDK15Q96Q40 435 aa7.84□□□□□ -1.15
CDC27-213ENST00000571643 FKBPLQ9UIM3 349 aa7.84□□□□□ -1.15
CDC27-213ENST00000571643 TERTO14746 1132 aaKnown RBP7.83□□□□□ -1.16
CDC27-213ENST00000571643 ADH1CP00326 375 aa7.83□□□□□ -1.16
CDC27-213ENST00000571643 USP17L8P0C7I0 530 aa7.83□□□□□ -1.16
CDC27-213ENST00000571643 PDXDC2PQ6P474 469 aa7.83□□□□□ -1.16
CDC27-213ENST00000571643 SH3BP5LQ7L8J4 393 aa7.83□□□□□ -1.16
CDC27-213ENST00000571643 SH3RF1Q7Z6J0 888 aa7.83□□□□□ -1.16
CDC27-213ENST00000571643 IL27Q8NEV9 243 aa7.83□□□□□ -1.16
CDC27-213ENST00000571643 FOXJ1Q92949 421 aa7.83□□□□□ -1.16
CDC27-213ENST00000571643 MAP4K5Q9Y4K4 846 aa7.83□□□□□ -1.16
CDC27-213ENST00000571643 INSM1Q01101 510 aaPredicted RBP7.82□□□□□ -1.16
CDC27-213ENST00000571643 NR5A1Q13285 461 aa7.82□□□□□ -1.16
CDC27-213ENST00000571643 TRMT44Q8IYL2 757 aaKnown RBP7.82□□□□□ -1.16
CDC27-213ENST00000571643 C1QTNF2Q9BXJ5 285 aa7.82□□□□□ -1.16
CDC27-213ENST00000571643 CDV3Q9UKY7 258 aaKnown RBP7.82□□□□□ -1.16
CDC27-213ENST00000571643 NNTQ13423 1086 aa7.81□□□□□ -1.16
CDC27-213ENST00000571643 NPAS3Q8IXF0 933 aa7.81□□□□□ -1.16
CDC27-213ENST00000571643 LRRN4Q8WUT4 740 aa7.81□□□□□ -1.16
CDC27-213ENST00000571643 GPSM3Q9Y4H4 160 aa7.81□□□□□ -1.16
CDC27-213ENST00000571643 APBB1O00213 710 aa7.8□□□□□ -1.16
CDC27-213ENST00000571643 CAPN5O15484 640 aaPredicted RBP7.8□□□□□ -1.16
CDC27-213ENST00000571643 ARHGAP9Q9BRR9 750 aa7.8□□□□□ -1.16
CDC27-213ENST00000571643 MAGEB6P1A0A0J9YX57 407 aa7.79□□□□□ -1.16
CDC27-213ENST00000571643 SOCS7O14512 581 aa7.79□□□□□ -1.16
CDC27-213ENST00000571643 PTK2Q05397 1052 aa7.79□□□□□ -1.16
CDC27-213ENST00000571643 ARID5BQ14865 1188 aa7.79□□□□□ -1.16
CDC27-213ENST00000571643 NR6A1Q15406 480 aa7.79□□□□□ -1.16
CDC27-213ENST00000571643 C4orf48Q5BLP8 95 aa7.79□□□□□ -1.16
CDC27-213ENST00000571643 FBXO31Q5XUX0 539 aaPredicted RBP7.79□□□□□ -1.16
CDC27-213ENST00000571643 SLC10A4Q96EP9 437 aa7.79□□□□□ -1.16
CDC27-213ENST00000571643 VASH1Q7L8A9 365 aaPredicted RBP7.77□□□□□ -1.17
CDC27-213ENST00000571643 TRIM46Q7Z4K8 759 aa7.77□□□□□ -1.17
CDC27-213ENST00000571643 ZBTB33Q86T24 672 aa7.77□□□□□ -1.17
CDC27-213ENST00000571643 BANK1Q8NDB2 785 aa7.77□□□□□ -1.17
CDC27-213ENST00000571643 CARD14Q9BXL6 1004 aa7.77□□□□□ -1.17
CDC27-213ENST00000571643 WDR4P57081 412 aaKnown RBP7.76□□□□□ -1.17
CDC27-213ENST00000571643 ERFEQ4G0M1 354 aa7.76□□□□□ -1.17
CDC27-213ENST00000571643 FSHRP23945 695 aa7.75□□□□□ -1.17
CDC27-213ENST00000571643 TRIM52Q96A61 297 aa7.75□□□□□ -1.17
CDC27-213ENST00000571643 HMX1Q9NP08 348 aaPredicted RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms