RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 MON2Q7Z3U7 1717 aa9.85□□□□□ -0.83
SMG6-209ENST00000571442 MARF1Q9Y4F3 1742 aaKnown RBP9.85□□□□□ -0.83
SMG6-209ENST00000571442 SPATA31A6Q5VVP1 1343 aa9.84□□□□□ -0.83
SMG6-209ENST00000571442 USP6P35125 1406 aa9.84□□□□□ -0.83
SMG6-209ENST00000571442 CPSF1Q10570 1443 aaKnown RBP9.84□□□□□ -0.83
SMG6-209ENST00000571442 C11orf95C9JLR9 678 aaPredicted RBP9.84□□□□□ -0.83
SMG6-209ENST00000571442 ATAD2Q6PL18 1390 aa9.84□□□□□ -0.83
SMG6-209ENST00000571442 PIK3C2AO00443 1686 aa9.83□□□□□ -0.84
SMG6-209ENST00000571442 NUTM2GQ5VZR2 741 aa9.83□□□□□ -0.84
SMG6-209ENST00000571442 PHRF1Q9P1Y6 1649 aaKnown RBP9.82□□□□□ -0.84
SMG6-209ENST00000571442 PAK3O75914 559 aaPredicted RBP9.82□□□□□ -0.84
SMG6-209ENST00000571442 ADAMTS2O95450 1211 aa9.82□□□□□ -0.84
SMG6-209ENST00000571442 EIF4G2P78344 907 aaKnown RBP eCLIP9.82□□□□□ -0.84
SMG6-209ENST00000571442 LMOD2Q6P5Q4 547 aa9.82□□□□□ -0.84
SMG6-209ENST00000571442 A0A1W2PP64 1363 aa9.81□□□□□ -0.84
SMG6-209ENST00000571442 TMF1P82094 1093 aa9.81□□□□□ -0.84
SMG6-209ENST00000571442 TMC1Q8TDI8 760 aa9.81□□□□□ -0.84
SMG6-209ENST00000571442 PUS7Q96PZ0 661 aaKnown RBP9.81□□□□□ -0.84
SMG6-209ENST00000571442 ARHGEF10O15013 1369 aa9.8□□□□□ -0.84
SMG6-209ENST00000571442 ZRANB1Q9UGI0 708 aa9.8□□□□□ -0.84
SMG6-209ENST00000571442 TTC21BQ7Z4L5 1316 aa9.8□□□□□ -0.84
SMG6-209ENST00000571442 KTN1Q86UP2 1357 aaKnown RBP9.79□□□□□ -0.84
SMG6-209ENST00000571442 C8orf37Q96NL8 207 aa9.79□□□□□ -0.84
SMG6-209ENST00000571442 ZNF772Q68DY9 489 aaPredicted RBP9.78□□□□□ -0.84
SMG6-209ENST00000571442 ABTB2Q8N961 1025 aa9.78□□□□□ -0.84
SMG6-209ENST00000571442 USP19O94966 1318 aa9.78□□□□□ -0.84
SMG6-209ENST00000571442 AFF2P51816 1311 aa9.78□□□□□ -0.84
SMG6-209ENST00000571442 PLCH1Q4KWH8 1693 aa9.77□□□□□ -0.84
SMG6-209ENST00000571442 SLIT3O75094 1523 aa9.77□□□□□ -0.84
SMG6-209ENST00000571442 NME9Q86XW9 330 aa9.77□□□□□ -0.85
SMG6-209ENST00000571442 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.77□□□□□ -0.85
SMG6-209ENST00000571442 ZNF692Q9BU19 519 aaPredicted RBP9.77□□□□□ -0.85
SMG6-209ENST00000571442 CARD14Q9BXL6 1004 aa9.77□□□□□ -0.85
SMG6-209ENST00000571442 BCL9LQ86UU0 1499 aa9.77□□□□□ -0.85
SMG6-209ENST00000571442 USP54Q70EL1 1684 aa9.77□□□□□ -0.85
SMG6-209ENST00000571442 SLIT2O94813 1529 aa9.77□□□□□ -0.85
SMG6-209ENST00000571442 ANKRD36BQ8N2N9 1353 aa9.76□□□□□ -0.85
SMG6-209ENST00000571442 NRAPQ86VF7 1730 aa9.76□□□□□ -0.85
SMG6-209ENST00000571442 FAM83GA6ND36 823 aa9.76□□□□□ -0.85
SMG6-209ENST00000571442 POLR3GLQ9BT43 218 aa9.76□□□□□ -0.85
SMG6-209ENST00000571442 KIF7Q2M1P5 1343 aa9.76□□□□□ -0.85
SMG6-209ENST00000571442 BRD4O60885 1362 aaPredicted RBP9.75□□□□□ -0.85
SMG6-209ENST00000571442 NINLQ9Y2I6 1382 aa9.75□□□□□ -0.85
SMG6-209ENST00000571442 EDC4Q6P2E9 1401 aaKnown RBP9.75□□□□□ -0.85
SMG6-209ENST00000571442 ZC3H6P61129 1189 aaKnown RBP9.75□□□□□ -0.85
SMG6-209ENST00000571442 HDGFL2Q7Z4V5 671 aaPredicted RBP9.75□□□□□ -0.85
SMG6-209ENST00000571442 FNBP4Q8N3X1 1017 aaPredicted RBP9.75□□□□□ -0.85
SMG6-209ENST00000571442 NGLY1Q96IV0 654 aa9.75□□□□□ -0.85
SMG6-209ENST00000571442 NFAT5O94916 1531 aa9.75□□□□□ -0.85
SMG6-209ENST00000571442 KIAA0232Q92628 1395 aa9.75□□□□□ -0.85
SMG6-209ENST00000571442 OVOS2A0A0J9YW53 1432 aa9.74□□□□□ -0.85
SMG6-209ENST00000571442 OVOS2Q6IE36 1432 aa9.74□□□□□ -0.85
SMG6-209ENST00000571442 LMO7Q8WWI1 1683 aa9.74□□□□□ -0.85
SMG6-209ENST00000571442 COL18A1P39060 1754 aa9.74□□□□□ -0.85
SMG6-209ENST00000571442 COL14A1Q05707 1796 aaKnown RBP9.74□□□□□ -0.85
SMG6-209ENST00000571442 SLC24A1O60721 1099 aa9.74□□□□□ -0.85
SMG6-209ENST00000571442 NLRP6P59044 892 aa9.74□□□□□ -0.85
SMG6-209ENST00000571442 CHRNA2Q15822 529 aa9.74□□□□□ -0.85
SMG6-209ENST00000571442 TERF2IPQ9NYB0 399 aa9.74□□□□□ -0.85
SMG6-209ENST00000571442 TTC21AQ8NDW8 1320 aa9.74□□□□□ -0.85
SMG6-209ENST00000571442 USP31Q70CQ4 1352 aa9.74□□□□□ -0.85
SMG6-209ENST00000571442 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.73□□□□□ -0.85
SMG6-209ENST00000571442 KIF20BQ96Q89 1820 aa9.73□□□□□ -0.85
SMG6-209ENST00000571442 GCP02774 474 aa9.73□□□□□ -0.85
SMG6-209ENST00000571442 FBLN1P23142 703 aa9.73□□□□□ -0.85
SMG6-209ENST00000571442 HAP1P54257 671 aaPredicted RBP9.73□□□□□ -0.85
SMG6-209ENST00000571442 CDCA8Q53HL2 280 aa9.73□□□□□ -0.85
SMG6-209ENST00000571442 NLRP13Q86W25 1043 aa9.73□□□□□ -0.85
SMG6-209ENST00000571442 USP21Q9UK80 565 aa9.73□□□□□ -0.85
SMG6-209ENST00000571442 WASHC2AQ641Q2 1341 aa9.73□□□□□ -0.85
SMG6-209ENST00000571442 NWD2Q9ULI1 1742 aa9.73□□□□□ -0.85
SMG6-209ENST00000571442 RGPD5Q99666 1765 aa9.73□□□□□ -0.85
SMG6-209ENST00000571442 ATRNO75882 1429 aa9.73□□□□□ -0.85
SMG6-209ENST00000571442 NSD3Q9BZ95 1437 aa9.73□□□□□ -0.85
SMG6-209ENST00000571442 CDK12Q9NYV4 1490 aaPredicted RBP9.72□□□□□ -0.85
SMG6-209ENST00000571442 GLI3P10071 1580 aa9.72□□□□□ -0.85
SMG6-209ENST00000571442 CAMTA1Q9Y6Y1 1673 aa9.72□□□□□ -0.85
SMG6-209ENST00000571442 SOX12O15370 315 aa9.72□□□□□ -0.85
SMG6-209ENST00000571442 RXRBP28702 533 aa9.72□□□□□ -0.85
SMG6-209ENST00000571442 CCDC7Q96M83 1385 aa9.72□□□□□ -0.85
SMG6-209ENST00000571442 FYB1O15117 783 aa9.71□□□□□ -0.86
SMG6-209ENST00000571442 GGNBP2Q9H3C7 697 aa9.71□□□□□ -0.86
SMG6-209ENST00000571442 PANK3Q9H999 370 aa9.71□□□□□ -0.86
SMG6-209ENST00000571442 CPDO75976 1380 aa9.71□□□□□ -0.86
SMG6-209ENST00000571442 LTN1O94822 1766 aa9.7□□□□□ -0.86
SMG6-209ENST00000571442 UNC5CLQ8IV45 518 aa9.7□□□□□ -0.86
SMG6-209ENST00000571442 QTRT2Q9H974 415 aaKnown RBP9.7□□□□□ -0.86
SMG6-209ENST00000571442 PRDM11Q9NQV5 511 aa9.7□□□□□ -0.86
SMG6-209ENST00000571442 BTG4Q9NY30 223 aa9.7□□□□□ -0.86
SMG6-209ENST00000571442 AXIN2Q9Y2T1 843 aa9.7□□□□□ -0.86
SMG6-209ENST00000571442 ZBTB7CA1YPR0 619 aa9.69□□□□□ -0.86
SMG6-209ENST00000571442 RGS12O14924 1447 aa9.69□□□□□ -0.86
SMG6-209ENST00000571442 ARHGEF25Q86VW2 580 aa9.69□□□□□ -0.86
SMG6-209ENST00000571442 UPF1Q92900 1129 aaKnown RBP eCLIP9.68□□□□□ -0.86
SMG6-209ENST00000571442 TRPC5Q9UL62 973 aaPredicted RBP9.68□□□□□ -0.86
SMG6-209ENST00000571442 PEAK1Q9H792 1746 aa9.68□□□□□ -0.86
SMG6-209ENST00000571442 ANKRD26Q9UPS8 1709 aa9.68□□□□□ -0.86
SMG6-209ENST00000571442 COL5A2P05997 1499 aaPredicted RBP9.67□□□□□ -0.86
SMG6-209ENST00000571442 AATKQ6ZMQ8 1374 aa9.66□□□□□ -0.86
SMG6-209ENST00000571442 BRWD3Q6RI45 1802 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 123.9 ms