RNA–Protein interactions for RNA: ENST00000571252.2

PCDHGA4-201, Transcript of protocadherin gamma subfamily A, 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA4, Length 4,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4-201ENST00000571252 C1orf115Q9H7X2 142 aa13.62□□□□□ -0.23
PCDHGA4-201ENST00000571252 HTATSF1O43719 755 aaKnown RBP13.62□□□□□ -0.23
PCDHGA4-201ENST00000571252 EIF2AK4Q9P2K8 1649 aaKnown RBP13.62□□□□□ -0.23
PCDHGA4-201ENST00000571252 PRKAR2BP31323 418 aa13.62□□□□□ -0.23
PCDHGA4-201ENST00000571252 GPATCH3Q96I76 525 aa13.62□□□□□ -0.23
PCDHGA4-201ENST00000571252 GRPEL1Q9HAV7 217 aa13.62□□□□□ -0.23
PCDHGA4-201ENST00000571252 NGDNQ8NEJ9 315 aaKnown RBP13.61□□□□□ -0.23
PCDHGA4-201ENST00000571252 ISY1Q9ULR0 285 aaKnown RBP13.61□□□□□ -0.23
PCDHGA4-201ENST00000571252 ATP6V1DQ9Y5K8 247 aa13.61□□□□□ -0.23
PCDHGA4-201ENST00000571252 CAVIN1Q6NZI2 390 aaKnown RBP13.61□□□□□ -0.23
PCDHGA4-201ENST00000571252 GCC1Q96CN9 775 aa13.61□□□□□ -0.23
PCDHGA4-201ENST00000571252 WDR7Q9Y4E6 1490 aa13.61□□□□□ -0.23
PCDHGA4-201ENST00000571252 POLR1AO95602 1720 aaPredicted RBP13.6□□□□□ -0.23
PCDHGA4-201ENST00000571252 NOS1P29475 1434 aa13.6□□□□□ -0.23
PCDHGA4-201ENST00000571252 LTV1Q96GA3 475 aaPredicted RBP13.6□□□□□ -0.23
PCDHGA4-201ENST00000571252 CARD14Q9BXL6 1004 aa13.6□□□□□ -0.23
PCDHGA4-201ENST00000571252 HDAC5Q9UQL6 1122 aa13.6□□□□□ -0.23
PCDHGA4-201ENST00000571252 IGHDP01880 384 aa13.59□□□□□ -0.23
PCDHGA4-201ENST00000571252 TBC1D2Q9BYX2 928 aa13.59□□□□□ -0.23
PCDHGA4-201ENST00000571252 MAGI2Q86UL8 1455 aa13.59□□□□□ -0.23
PCDHGA4-201ENST00000571252 ASXL2Q76L83 1435 aa13.59□□□□□ -0.23
PCDHGA4-201ENST00000571252 NSD3Q9BZ95 1437 aa13.59□□□□□ -0.23
PCDHGA4-201ENST00000571252 TRPM1Q7Z4N2 1603 aa13.59□□□□□ -0.23
PCDHGA4-201ENST00000571252 RABEP1Q15276 862 aa13.58□□□□□ -0.24
PCDHGA4-201ENST00000571252 CHD1LQ86WJ1 897 aa13.58□□□□□ -0.24
PCDHGA4-201ENST00000571252 ESPNB1AK53 854 aa13.58□□□□□ -0.24
PCDHGA4-201ENST00000571252 RNF214Q8ND24 703 aa13.58□□□□□ -0.24
PCDHGA4-201ENST00000571252 SPINK5Q9NQ38 1064 aaPredicted RBP13.58□□□□□ -0.24
PCDHGA4-201ENST00000571252 CCDC9Q9Y3X0 531 aaKnown RBP13.58□□□□□ -0.24
PCDHGA4-201ENST00000571252 RTEL1-TNFRSF6BF6WH68 1400 aa13.58□□□□□ -0.24
PCDHGA4-201ENST00000571252 ATP10AO60312 1499 aa13.58□□□□□ -0.24
PCDHGA4-201ENST00000571252 CIZ1Q9ULV3 898 aaPredicted RBP13.58□□□□□ -0.24
PCDHGA4-201ENST00000571252 R3HCC1Q9Y3T6 440 aaKnown RBP13.58□□□□□ -0.24
PCDHGA4-201ENST00000571252 ASXL1Q8IXJ9 1541 aa13.57□□□□□ -0.24
PCDHGA4-201ENST00000571252 K7ELQ4 463 aaPredicted RBP13.57□□□□□ -0.24
PCDHGA4-201ENST00000571252 CD109Q6YHK3 1445 aa13.57□□□□□ -0.24
PCDHGA4-201ENST00000571252 FKBP5Q13451 457 aaPredicted RBP13.57□□□□□ -0.24
PCDHGA4-201ENST00000571252 TWISTNBQ3B726 338 aaPredicted RBP13.57□□□□□ -0.24
PCDHGA4-201ENST00000571252 NECTIN2Q92692 538 aa13.57□□□□□ -0.24
PCDHGA4-201ENST00000571252 ZNF330Q9Y3S2 320 aaPredicted RBP13.57□□□□□ -0.24
PCDHGA4-201ENST00000571252 TMEM57Q8N5G2 664 aa13.56□□□□□ -0.24
PCDHGA4-201ENST00000571252 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.56□□□□□ -0.24
PCDHGA4-201ENST00000571252 PRDM15P57071 1507 aaPredicted RBP13.56□□□□□ -0.24
PCDHGA4-201ENST00000571252 PRPF40AO75400 957 aaKnown RBP13.56□□□□□ -0.24
PCDHGA4-201ENST00000571252 CCDC173Q0VFZ6 552 aa13.56□□□□□ -0.24
PCDHGA4-201ENST00000571252 ABCC1P33527 1531 aa13.56□□□□□ -0.24
PCDHGA4-201ENST00000571252 C8orf34Q49A92 452 aa13.56□□□□□ -0.24
PCDHGA4-201ENST00000571252 TMPOP42166 694 aaKnown RBP13.55□□□□□ -0.24
PCDHGA4-201ENST00000571252 NEK4P51957 841 aa13.55□□□□□ -0.24
PCDHGA4-201ENST00000571252 DIAPH3Q9NSV4 1193 aa13.55□□□□□ -0.24
PCDHGA4-201ENST00000571252 ZCCHC11Q5TAX3 1644 aaKnown RBP13.55□□□□□ -0.24
PCDHGA4-201ENST00000571252 HSP90B1P14625 803 aaKnown RBP13.55□□□□□ -0.24
PCDHGA4-201ENST00000571252 SSH1Q8WYL5 1049 aa13.55□□□□□ -0.24
PCDHGA4-201ENST00000571252 IQGAP3Q86VI3 1631 aa13.55□□□□□ -0.24
PCDHGA4-201ENST00000571252 UNC13BO14795 1591 aa13.55□□□□□ -0.24
PCDHGA4-201ENST00000571252 BLMP54132 1417 aaPredicted RBP13.55□□□□□ -0.24
PCDHGA4-201ENST00000571252 ATP7AQ04656 1500 aa13.54□□□□□ -0.24
PCDHGA4-201ENST00000571252 CFAP65Q6ZU64 1925 aaKnown RBP13.54□□□□□ -0.24
PCDHGA4-201ENST00000571252 PRKCSHP14314 528 aaPredicted RBP13.54□□□□□ -0.24
PCDHGA4-201ENST00000571252 UGGT1Q9NYU2 1555 aa13.54□□□□□ -0.24
PCDHGA4-201ENST00000571252 PLXNC1O60486 1568 aa13.54□□□□□ -0.24
PCDHGA4-201ENST00000571252 C14orf93Q9H972 538 aaKnown RBP13.54□□□□□ -0.24
PCDHGA4-201ENST00000571252 TSPYL4Q9UJ04 414 aa13.53□□□□□ -0.24
PCDHGA4-201ENST00000571252 DMRT2Q9Y5R5 561 aa13.53□□□□□ -0.24
PCDHGA4-201ENST00000571252 MBD3O95983 291 aa13.53□□□□□ -0.24
PCDHGA4-201ENST00000571252 TBC1D32Q96NH3 1257 aa13.53□□□□□ -0.24
PCDHGA4-201ENST00000571252 PRAM1Q96QH2 718 aa13.53□□□□□ -0.24
PCDHGA4-201ENST00000571252 TPM2P07951 284 aa13.53□□□□□ -0.24
PCDHGA4-201ENST00000571252 CHMP3Q9Y3E7 222 aa13.53□□□□□ -0.24
PCDHGA4-201ENST00000571252 RUFY2Q8WXA3 655 aa13.52□□□□□ -0.24
PCDHGA4-201ENST00000571252 GNL2Q13823 731 aaKnown RBP13.52□□□□□ -0.24
PCDHGA4-201ENST00000571252 IDI1Q13907 227 aa13.52□□□□□ -0.25
PCDHGA4-201ENST00000571252 ZKSCAN1P17029 563 aaPredicted RBP13.52□□□□□ -0.25
PCDHGA4-201ENST00000571252 SMC3Q9UQE7 1217 aa13.52□□□□□ -0.25
PCDHGA4-201ENST00000571252 EIF2S2P20042 333 aaKnown RBP13.51□□□□□ -0.25
PCDHGA4-201ENST00000571252 CCDC39Q9UFE4 941 aa13.51□□□□□ -0.25
PCDHGA4-201ENST00000571252 VPS37CA5D8V6 355 aaPredicted RBP13.51□□□□□ -0.25
PCDHGA4-201ENST00000571252 TULP1O00294 542 aaPredicted RBP13.51□□□□□ -0.25
PCDHGA4-201ENST00000571252 ZNF428Q96B54 188 aa13.5□□□□□ -0.25
PCDHGA4-201ENST00000571252 CABP1Q9NZU7 370 aa13.5□□□□□ -0.25
PCDHGA4-201ENST00000571252 PCDHB15Q9Y5E8 787 aa13.5□□□□□ -0.25
PCDHGA4-201ENST00000571252 ZMYM4Q5VZL5 1548 aa13.5□□□□□ -0.25
PCDHGA4-201ENST00000571252 CWC22Q9HCG8 908 aaKnown RBP13.5□□□□□ -0.25
PCDHGA4-201ENST00000571252 PIK3C2GO75747 1445 aa13.5□□□□□ -0.25
PCDHGA4-201ENST00000571252 UHRF1BP1LA0JNW5 1464 aa13.5□□□□□ -0.25
PCDHGA4-201ENST00000571252 GOLGA6L19H0YKK7 550 aa13.49□□□□□ -0.25
PCDHGA4-201ENST00000571252 H3BQV1 296 aa13.49□□□□□ -0.25
PCDHGA4-201ENST00000571252 TRIM27P14373 513 aa13.49□□□□□ -0.25
PCDHGA4-201ENST00000571252 MCM2P49736 904 aa13.49□□□□□ -0.25
PCDHGA4-201ENST00000571252 IFFO2Q5TF58 517 aa13.49□□□□□ -0.25
PCDHGA4-201ENST00000571252 KIF3AQ9Y496 699 aa13.49□□□□□ -0.25
PCDHGA4-201ENST00000571252 RPGRIP1LQ68CZ1 1315 aa13.49□□□□□ -0.25
PCDHGA4-201ENST00000571252 TMX4Q9H1E5 349 aaPredicted RBP13.49□□□□□ -0.25
PCDHGA4-201ENST00000571252 TRPM2O94759 1503 aa13.49□□□□□ -0.25
PCDHGA4-201ENST00000571252 TEFQ10587 303 aa13.48□□□□□ -0.25
PCDHGA4-201ENST00000571252 BECN2A8MW95 431 aa13.48□□□□□ -0.25
PCDHGA4-201ENST00000571252 FCHSD2O94868 740 aa13.48□□□□□ -0.25
PCDHGA4-201ENST00000571252 TPM4P67936 248 aa13.48□□□□□ -0.25
PCDHGA4-201ENST00000571252 ZNF518AQ6AHZ1 1483 aa13.48□□□□□ -0.25
PCDHGA4-201ENST00000571252 MAP7D2Q96T17 732 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms