RNA–Protein interactions for RNA: ENST00000570979.1

SPNS2-203, Transcript of sphingolipid transporter 2, humanhuman

TSL 1 (best)

Gene SPNS2, Length 1,768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS2-203ENST00000570979 PDE3BQ13370 1112 aa26.13■■□□□ 1.77
SPNS2-203ENST00000570979 CENPJQ9HC77 1338 aaPredicted RBP26.13■■□□□ 1.77
SPNS2-203ENST00000570979 NUDCQ9Y266 331 aa26.12■■□□□ 1.77
SPNS2-203ENST00000570979 PXDNQ92626 1479 aa26.12■■□□□ 1.77
SPNS2-203ENST00000570979 NPHP3Q7Z494 1330 aa26.11■■□□□ 1.77
SPNS2-203ENST00000570979 RGPD8O14715 1765 aaPredicted RBP26.11■■□□□ 1.77
SPNS2-203ENST00000570979 CC2D1BQ5T0F9 858 aaKnown RBP26.1■■□□□ 1.77
SPNS2-203ENST00000570979 POGKQ9P215 609 aa26.1■■□□□ 1.77
SPNS2-203ENST00000570979 ZNF772Q68DY9 489 aaPredicted RBP26.07■■□□□ 1.76
SPNS2-203ENST00000570979 AFF2P51816 1311 aa26.07■■□□□ 1.76
SPNS2-203ENST00000570979 C8orf37Q96NL8 207 aa26.06■■□□□ 1.76
SPNS2-203ENST00000570979 ADAMTS2O95450 1211 aa26.05■■□□□ 1.76
SPNS2-203ENST00000570979 AMER1Q5JTC6 1135 aaPredicted RBP26.05■■□□□ 1.76
SPNS2-203ENST00000570979 COL22A1Q8NFW1 1626 aaPredicted RBP26.04■■□□□ 1.76
SPNS2-203ENST00000570979 MINK1Q8N4C8 1332 aaPredicted RBP26.04■■□□□ 1.76
SPNS2-203ENST00000570979 ADGRB2O60241 1585 aa26.03■■□□□ 1.76
SPNS2-203ENST00000570979 MYOM1P52179 1685 aa26.03■■□□□ 1.76
SPNS2-203ENST00000570979 KIF1AQ12756 1690 aa26.03■■□□□ 1.76
SPNS2-203ENST00000570979 USP32Q8NFA0 1604 aa26.03■■□□□ 1.76
SPNS2-203ENST00000570979 PPP4R2Q9NY27 417 aa26.02■■□□□ 1.76
SPNS2-203ENST00000570979 PHF8Q9UPP1 1060 aa26.02■■□□□ 1.76
SPNS2-203ENST00000570979 ARHGEF28Q8N1W1 1705 aaKnown RBP26.01■■□□□ 1.75
SPNS2-203ENST00000570979 KRT28Q7Z3Y7 464 aa26■■□□□ 1.75
SPNS2-203ENST00000570979 PPP2R1AP30153 589 aa25.98■■□□□ 1.75
SPNS2-203ENST00000570979 BLMP54132 1417 aaPredicted RBP25.98■■□□□ 1.75
SPNS2-203ENST00000570979 SPATA31A3Q5VYP0 1347 aa25.98■■□□□ 1.75
SPNS2-203ENST00000570979 PRR36Q9H6K5 1346 aa25.98■■□□□ 1.75
SPNS2-203ENST00000570979 NGLY1Q96IV0 654 aa25.97■■□□□ 1.75
SPNS2-203ENST00000570979 QRICH2Q9H0J4 1663 aa25.97■■□□□ 1.75
SPNS2-203ENST00000570979 ANKARQ7Z5J8 1434 aa25.97■■□□□ 1.75
SPNS2-203ENST00000570979 EVC2Q86UK5 1308 aa25.96■■□□□ 1.75
SPNS2-203ENST00000570979 PMFBP1Q8TBY8 1022 aa25.96■■□□□ 1.75
SPNS2-203ENST00000570979 RXRBP28702 533 aa25.95■■□□□ 1.75
SPNS2-203ENST00000570979 WDR43Q15061 677 aaKnown RBP eCLIP25.95■■□□□ 1.75
SPNS2-203ENST00000570979 RNF123Q5XPI4 1314 aa25.95■■□□□ 1.74
SPNS2-203ENST00000570979 WASLO00401 505 aaPredicted RBP25.95■■□□□ 1.74
SPNS2-203ENST00000570979 QTRT2Q9H974 415 aaKnown RBP25.93■■□□□ 1.74
SPNS2-203ENST00000570979 NINLQ9Y2I6 1382 aa25.92■■□□□ 1.74
SPNS2-203ENST00000570979 TULP4Q9NRJ4 1543 aa25.92■■□□□ 1.74
SPNS2-203ENST00000570979 NGEFQ8N5V2 710 aa25.92■■□□□ 1.74
SPNS2-203ENST00000570979 TSHZ2Q9NRE2 1034 aa25.9■■□□□ 1.74
SPNS2-203ENST00000570979 TNS3Q68CZ2 1445 aa25.9■■□□□ 1.74
SPNS2-203ENST00000570979 PSME1Q06323 249 aa25.9■■□□□ 1.74
SPNS2-203ENST00000570979 FNBP4Q8N3X1 1017 aaPredicted RBP25.9■■□□□ 1.74
SPNS2-203ENST00000570979 MARF1Q9Y4F3 1742 aaKnown RBP25.89■■□□□ 1.73
SPNS2-203ENST00000570979 USP21Q9UK80 565 aa25.88■■□□□ 1.73
SPNS2-203ENST00000570979 SBNO1A3KN83 1393 aa25.88■■□□□ 1.73
SPNS2-203ENST00000570979 PLEKHG5O94827 1062 aa25.86■■□□□ 1.73
SPNS2-203ENST00000570979 CABLES1Q8TDN4 633 aa25.86■■□□□ 1.73
SPNS2-203ENST00000570979 CDK12Q9NYV4 1490 aaPredicted RBP25.85■■□□□ 1.73
SPNS2-203ENST00000570979 RBM6P78332 1123 aaKnown RBP25.85■■□□□ 1.73
SPNS2-203ENST00000570979 TRPM3Q9HCF6 1732 aaPredicted RBP25.85■■□□□ 1.73
SPNS2-203ENST00000570979 NSD2O96028 1365 aa25.84■■□□□ 1.73
SPNS2-203ENST00000570979 ATP7BP35670 1465 aa25.84■■□□□ 1.73
SPNS2-203ENST00000570979 LMOD2Q6P5Q4 547 aa25.84■■□□□ 1.73
SPNS2-203ENST00000570979 NUDT16Q96DE0 195 aaKnown RBP25.84■■□□□ 1.73
SPNS2-203ENST00000570979 CDK19Q9BWU1 502 aa25.84■■□□□ 1.73
SPNS2-203ENST00000570979 BCL9LQ86UU0 1499 aa25.84■■□□□ 1.73
SPNS2-203ENST00000570979 RGS12O14924 1447 aa25.83■■□□□ 1.73
SPNS2-203ENST00000570979 ATRNO75882 1429 aa25.82■■□□□ 1.72
SPNS2-203ENST00000570979 CARD14Q9BXL6 1004 aa25.82■■□□□ 1.72
SPNS2-203ENST00000570979 CGNL1Q0VF96 1302 aa25.81■■□□□ 1.72
SPNS2-203ENST00000570979 ADAMTS8Q9UP79 889 aa25.81■■□□□ 1.72
SPNS2-203ENST00000570979 TRPC5Q9UL62 973 aaPredicted RBP25.8■■□□□ 1.72
SPNS2-203ENST00000570979 IRX6P78412 446 aaPredicted RBP25.79■■□□□ 1.72
SPNS2-203ENST00000570979 NGDNQ8NEJ9 315 aaKnown RBP25.79■■□□□ 1.72
SPNS2-203ENST00000570979 ABCA3Q99758 1704 aa25.79■■□□□ 1.72
SPNS2-203ENST00000570979 ARHGEF10O15013 1369 aa25.79■■□□□ 1.72
SPNS2-203ENST00000570979 ANKRD36BQ8N2N9 1353 aa25.79■■□□□ 1.72
SPNS2-203ENST00000570979 POLR3AO14802 1390 aaPredicted RBP25.78■■□□□ 1.72
SPNS2-203ENST00000570979 ATAD2Q6PL18 1390 aa25.78■■□□□ 1.72
SPNS2-203ENST00000570979 ALS2Q96Q42 1657 aa25.78■■□□□ 1.72
SPNS2-203ENST00000570979 ITSN1Q15811 1721 aa25.78■■□□□ 1.72
SPNS2-203ENST00000570979 RCAN3Q9UKA8 241 aa25.77■■□□□ 1.72
SPNS2-203ENST00000570979 NSD3Q9BZ95 1437 aa25.77■■□□□ 1.72
SPNS2-203ENST00000570979 SLIT2O94813 1529 aa25.77■■□□□ 1.72
SPNS2-203ENST00000570979 MORC1Q86VD1 984 aa25.77■■□□□ 1.72
SPNS2-203ENST00000570979 HAP1P54257 671 aaPredicted RBP25.76■■□□□ 1.71
SPNS2-203ENST00000570979 UPF1Q92900 1129 aaKnown RBP eCLIP25.76■■□□□ 1.71
SPNS2-203ENST00000570979 TOPAZ1Q8N9V7 1692 aa25.75■■□□□ 1.71
SPNS2-203ENST00000570979 SLC12A5Q9H2X9 1139 aa25.74■■□□□ 1.71
SPNS2-203ENST00000570979 UNC5CLQ8IV45 518 aa25.72■■□□□ 1.71
SPNS2-203ENST00000570979 CCDC61Q9Y6R9 512 aa25.72■■□□□ 1.71
SPNS2-203ENST00000570979 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.72■■□□□ 1.71
SPNS2-203ENST00000570979 PAK3O75914 559 aaPredicted RBP25.72■■□□□ 1.71
SPNS2-203ENST00000570979 CFAP53Q96M91 514 aa25.72■■□□□ 1.71
SPNS2-203ENST00000570979 TERF2IPQ9NYB0 399 aa25.72■■□□□ 1.71
SPNS2-203ENST00000570979 CABP2Q9NPB3 220 aa25.71■■□□□ 1.71
SPNS2-203ENST00000570979 ACEP12821 1306 aa25.71■■□□□ 1.71
SPNS2-203ENST00000570979 PLEKHG3A1L390 1219 aa25.69■■□□□ 1.7
SPNS2-203ENST00000570979 FAM83GA6ND36 823 aa25.69■■□□□ 1.7
SPNS2-203ENST00000570979 RRP1P56182 461 aaKnown RBP25.69■■□□□ 1.7
SPNS2-203ENST00000570979 GJD4Q96KN9 370 aaPredicted RBP25.69■■□□□ 1.7
SPNS2-203ENST00000570979 PLCH1Q4KWH8 1693 aa25.69■■□□□ 1.7
SPNS2-203ENST00000570979 SRPK2P78362 688 aaKnown RBP25.69■■□□□ 1.7
SPNS2-203ENST00000570979 CRYBG1Q9Y4K1 1723 aa25.68■■□□□ 1.7
SPNS2-203ENST00000570979 GOLGA2Q08379 1002 aa25.67■■□□□ 1.7
SPNS2-203ENST00000570979 SALL2Q9Y467 1007 aaPredicted RBP25.67■■□□□ 1.7
SPNS2-203ENST00000570979 GLI3P10071 1580 aa25.66■■□□□ 1.7
SPNS2-203ENST00000570979 NCBP3Q53F19 620 aaKnown RBP25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms