RNA–Protein interactions for RNA: ENST00000570827.6

USP43-203, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 2

Gene USP43, Length 3,624 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-203ENST00000570827 GPRASP1Q5JY77 1395 aa12.27□□□□□ -0.44
USP43-203ENST00000570827 NCKAP5LQ9HCH0 1330 aa12.27□□□□□ -0.44
USP43-203ENST00000570827 RBM27Q9P2N5 1060 aaKnown RBP12.27□□□□□ -0.44
USP43-203ENST00000570827 PRDM10Q9NQV6 1147 aa12.27□□□□□ -0.45
USP43-203ENST00000570827 A0A0U1RQG5 324 aaPredicted RBP12.26□□□□□ -0.45
USP43-203ENST00000570827 ST18O60284 1047 aa12.26□□□□□ -0.45
USP43-203ENST00000570827 PRKAR2BP31323 418 aa12.26□□□□□ -0.45
USP43-203ENST00000570827 PREX2Q70Z35 1606 aa12.26□□□□□ -0.45
USP43-203ENST00000570827 RRS1Q15050 365 aaKnown RBP12.26□□□□□ -0.45
USP43-203ENST00000570827 RILPL2Q969X0 211 aa12.26□□□□□ -0.45
USP43-203ENST00000570827 CCDC173Q0VFZ6 552 aa12.26□□□□□ -0.45
USP43-203ENST00000570827 TAOK2Q9UL54 1235 aa12.26□□□□□ -0.45
USP43-203ENST00000570827 EVC2Q86UK5 1308 aa12.26□□□□□ -0.45
USP43-203ENST00000570827 KIF16BQ96L93 1317 aa12.26□□□□□ -0.45
USP43-203ENST00000570827 PTMSP20962 102 aa12.25□□□□□ -0.45
USP43-203ENST00000570827 TXNDC2Q86VQ3 553 aa12.25□□□□□ -0.45
USP43-203ENST00000570827 GAS2L2Q8NHY3 880 aa12.25□□□□□ -0.45
USP43-203ENST00000570827 CHMP4BQ9H444 224 aaKnown RBP12.25□□□□□ -0.45
USP43-203ENST00000570827 AAMPQ13685 434 aa12.25□□□□□ -0.45
USP43-203ENST00000570827 HDGFL2Q7Z4V5 671 aaPredicted RBP12.25□□□□□ -0.45
USP43-203ENST00000570827 OSCARQ8IYS5 282 aa12.25□□□□□ -0.45
USP43-203ENST00000570827 E9PCH4 1651 aa12.25□□□□□ -0.45
USP43-203ENST00000570827 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.25□□□□□ -0.45
USP43-203ENST00000570827 TBC1D9Q6ZT07 1266 aa12.25□□□□□ -0.45
USP43-203ENST00000570827 TRMT2AQ8IZ69 625 aaKnown RBP12.25□□□□□ -0.45
USP43-203ENST00000570827 CDC45O75419 566 aa12.24□□□□□ -0.45
USP43-203ENST00000570827 ZSCAN30Q86W11 494 aa12.24□□□□□ -0.45
USP43-203ENST00000570827 CHAMP1Q96JM3 812 aa12.24□□□□□ -0.45
USP43-203ENST00000570827 CHMP3Q9Y3E7 222 aa12.24□□□□□ -0.45
USP43-203ENST00000570827 NINLQ9Y2I6 1382 aa12.24□□□□□ -0.45
USP43-203ENST00000570827 ASXL1Q8IXJ9 1541 aa12.24□□□□□ -0.45
USP43-203ENST00000570827 SMARCA5O60264 1052 aaPredicted RBP12.24□□□□□ -0.45
USP43-203ENST00000570827 MIS18AQ9NYP9 233 aa12.24□□□□□ -0.45
USP43-203ENST00000570827 ZRANB1Q9UGI0 708 aa12.24□□□□□ -0.45
USP43-203ENST00000570827 SYCE3A1L190 88 aa12.24□□□□□ -0.45
USP43-203ENST00000570827 FAM69CQ0P6D2 419 aa12.24□□□□□ -0.45
USP43-203ENST00000570827 IDI1Q13907 227 aa12.24□□□□□ -0.45
USP43-203ENST00000570827 TERF2IPQ9NYB0 399 aa12.24□□□□□ -0.45
USP43-203ENST00000570827 ERBB4Q15303 1308 aa12.24□□□□□ -0.45
USP43-203ENST00000570827 UQCRHLA0A096LP55 91 aa12.23□□□□□ -0.45
USP43-203ENST00000570827 UQCRHP07919 91 aa12.23□□□□□ -0.45
USP43-203ENST00000570827 TPM2P07951 284 aa12.23□□□□□ -0.45
USP43-203ENST00000570827 BAG4O95429 457 aaKnown RBP12.23□□□□□ -0.45
USP43-203ENST00000570827 NEK4P51957 841 aa12.23□□□□□ -0.45
USP43-203ENST00000570827 KIAA2012Q0VF49 1180 aa12.23□□□□□ -0.45
USP43-203ENST00000570827 FANCAO15360 1455 aa12.22□□□□□ -0.45
USP43-203ENST00000570827 CD2BP2O95400 341 aaKnown RBP12.22□□□□□ -0.45
USP43-203ENST00000570827 SCAF11Q99590 1463 aaKnown RBP12.22□□□□□ -0.45
USP43-203ENST00000570827 NUCB2P80303 420 aa12.22□□□□□ -0.45
USP43-203ENST00000570827 C16orf71Q8IYS4 520 aaPredicted RBP12.22□□□□□ -0.45
USP43-203ENST00000570827 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.21□□□□□ -0.45
USP43-203ENST00000570827 GDPD2Q9HCC8 539 aa12.21□□□□□ -0.45
USP43-203ENST00000570827 ANO2Q9NQ90 1003 aa12.21□□□□□ -0.45
USP43-203ENST00000570827 ZCCHC11Q5TAX3 1644 aaKnown RBP12.21□□□□□ -0.46
USP43-203ENST00000570827 FSD2A1L4K1 749 aa12.21□□□□□ -0.46
USP43-203ENST00000570827 MYO5CQ9NQX4 1742 aa12.21□□□□□ -0.46
USP43-203ENST00000570827 TRPM1Q7Z4N2 1603 aa12.21□□□□□ -0.46
USP43-203ENST00000570827 VGFO15240 615 aaPredicted RBP12.2□□□□□ -0.46
USP43-203ENST00000570827 DUOX2Q9NRD8 1548 aa12.2□□□□□ -0.46
USP43-203ENST00000570827 FAM83GA6ND36 823 aa12.2□□□□□ -0.46
USP43-203ENST00000570827 CIZ1Q9ULV3 898 aaPredicted RBP12.2□□□□□ -0.46
USP43-203ENST00000570827 LAMC1P11047 1609 aa12.2□□□□□ -0.46
USP43-203ENST00000570827 EIF2AK4Q9P2K8 1649 aaKnown RBP12.2□□□□□ -0.46
USP43-203ENST00000570827 PIK3C2GO75747 1445 aa12.19□□□□□ -0.46
USP43-203ENST00000570827 ADGRL1O94910 1474 aa12.19□□□□□ -0.46
USP43-203ENST00000570827 TWISTNBQ3B726 338 aaPredicted RBP12.19□□□□□ -0.46
USP43-203ENST00000570827 TSHZ3Q63HK5 1081 aa12.19□□□□□ -0.46
USP43-203ENST00000570827 NOS1P29475 1434 aa12.19□□□□□ -0.46
USP43-203ENST00000570827 NUCB1Q02818 461 aa12.19□□□□□ -0.46
USP43-203ENST00000570827 INTS3Q68E01 1043 aaKnown RBP12.19□□□□□ -0.46
USP43-203ENST00000570827 DRC7Q8IY82 874 aa12.19□□□□□ -0.46
USP43-203ENST00000570827 SLC26A8Q96RN1 970 aa12.19□□□□□ -0.46
USP43-203ENST00000570827 EMILIN1Q9Y6C2 1016 aa12.19□□□□□ -0.46
USP43-203ENST00000570827 DTNBO60941 627 aa12.18□□□□□ -0.46
USP43-203ENST00000570827 MCCP23508 829 aa12.18□□□□□ -0.46
USP43-203ENST00000570827 PRIM1P49642 420 aaKnown RBP12.18□□□□□ -0.46
USP43-203ENST00000570827 RAB3GAP1Q15042 981 aa12.18□□□□□ -0.46
USP43-203ENST00000570827 ZGPATQ8N5A5 531 aaKnown RBP12.18□□□□□ -0.46
USP43-203ENST00000570827 ASXL2Q76L83 1435 aa12.18□□□□□ -0.46
USP43-203ENST00000570827 HDAC1Q13547 482 aaPredicted RBP12.18□□□□□ -0.46
USP43-203ENST00000570827 LARP6Q9BRS8 491 aaKnown RBP12.18□□□□□ -0.46
USP43-203ENST00000570827 CDK19Q9BWU1 502 aa12.18□□□□□ -0.46
USP43-203ENST00000570827 ATAD2Q6PL18 1390 aa12.18□□□□□ -0.46
USP43-203ENST00000570827 WDR7Q9Y4E6 1490 aa12.17□□□□□ -0.46
USP43-203ENST00000570827 PKP1Q13835 747 aa12.17□□□□□ -0.46
USP43-203ENST00000570827 CCDC27Q2M243 656 aa12.17□□□□□ -0.46
USP43-203ENST00000570827 TSPYL6Q8N831 410 aa12.17□□□□□ -0.46
USP43-203ENST00000570827 GCC1Q96CN9 775 aa12.17□□□□□ -0.46
USP43-203ENST00000570827 ZNF830Q96NB3 372 aaPredicted RBP12.17□□□□□ -0.46
USP43-203ENST00000570827 ISY1Q9ULR0 285 aaKnown RBP12.17□□□□□ -0.46
USP43-203ENST00000570827 PRDM15P57071 1507 aaPredicted RBP12.17□□□□□ -0.46
USP43-203ENST00000570827 RABEP1Q15276 862 aa12.17□□□□□ -0.46
USP43-203ENST00000570827 ZSCAN23Q3MJ62 389 aa12.17□□□□□ -0.46
USP43-203ENST00000570827 SMC5Q8IY18 1101 aa12.17□□□□□ -0.46
USP43-203ENST00000570827 ZBTB40Q9NUA8 1239 aa12.17□□□□□ -0.46
USP43-203ENST00000570827 FAM177BA6PVY3 158 aa12.17□□□□□ -0.46
USP43-203ENST00000570827 TRHP20396 242 aaPredicted RBP12.17□□□□□ -0.46
USP43-203ENST00000570827 UPF3BQ9BZI7 483 aaKnown RBP12.17□□□□□ -0.46
USP43-203ENST00000570827 A0A0G2JS52 829 aa12.16□□□□□ -0.46
USP43-203ENST00000570827 KCNJ4P48050 445 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms