RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 MADDQ8WXG6 1647 aa19.07■□□□□ 0.64
USP43-202ENST00000570475 TWISTNBQ3B726 338 aaPredicted RBP19.07■□□□□ 0.64
USP43-202ENST00000570475 DDX11L8A8MPP1 907 aa19.06■□□□□ 0.64
USP43-202ENST00000570475 A0A1W2PP64 1363 aa19.06■□□□□ 0.64
USP43-202ENST00000570475 RSPH6AQ9H0K4 717 aa19.05■□□□□ 0.64
USP43-202ENST00000570475 ANTXR1Q9H6X2 564 aa19.05■□□□□ 0.64
USP43-202ENST00000570475 CCDC27Q2M243 656 aa19.05■□□□□ 0.64
USP43-202ENST00000570475 NME9Q86XW9 330 aa19.05■□□□□ 0.64
USP43-202ENST00000570475 KDM5AP29375 1690 aaKnown RBP19.05■□□□□ 0.64
USP43-202ENST00000570475 TRPM2O94759 1503 aa19.05■□□□□ 0.64
USP43-202ENST00000570475 NCKAP5LQ9HCH0 1330 aa19.05■□□□□ 0.64
USP43-202ENST00000570475 ATAD2Q6PL18 1390 aa19.04■□□□□ 0.64
USP43-202ENST00000570475 TNPO1Q92973 898 aaKnown RBP19.04■□□□□ 0.64
USP43-202ENST00000570475 ZBTB40Q9NUA8 1239 aa19.04■□□□□ 0.64
USP43-202ENST00000570475 TXNDC2Q86VQ3 553 aa19.04■□□□□ 0.64
USP43-202ENST00000570475 MIS18AQ9NYP9 233 aa19.04■□□□□ 0.64
USP43-202ENST00000570475 ABCC1P33527 1531 aa19.03■□□□□ 0.64
USP43-202ENST00000570475 ATP7AQ04656 1500 aa19.03■□□□□ 0.64
USP43-202ENST00000570475 KRT24Q2M2I5 525 aa19.03■□□□□ 0.64
USP43-202ENST00000570475 ANKRD36BQ8N2N9 1353 aa19.03■□□□□ 0.64
USP43-202ENST00000570475 SMARCA5O60264 1052 aaPredicted RBP19.03■□□□□ 0.64
USP43-202ENST00000570475 RTEL1-TNFRSF6BF6WH68 1400 aa19.03■□□□□ 0.64
USP43-202ENST00000570475 C14orf37Q86TY3 774 aa19.03■□□□□ 0.64
USP43-202ENST00000570475 HDAC1Q13547 482 aaPredicted RBP19.02■□□□□ 0.64
USP43-202ENST00000570475 C16orf71Q8IYS4 520 aaPredicted RBP19.02■□□□□ 0.64
USP43-202ENST00000570475 GRPEL1Q9HAV7 217 aa19.02■□□□□ 0.64
USP43-202ENST00000570475 ARID3AQ99856 593 aa19.01■□□□□ 0.63
USP43-202ENST00000570475 MCTP1Q6DN14 999 aa19.01■□□□□ 0.63
USP43-202ENST00000570475 PLXNC1O60486 1568 aa19.01■□□□□ 0.63
USP43-202ENST00000570475 SSFA2P28290 1259 aa19.01■□□□□ 0.63
USP43-202ENST00000570475 TBC1D9Q6ZT07 1266 aa19.01■□□□□ 0.63
USP43-202ENST00000570475 COG3Q96JB2 828 aa19.01■□□□□ 0.63
USP43-202ENST00000570475 GNAI1P63096 354 aa19■□□□□ 0.63
USP43-202ENST00000570475 ASXL2Q76L83 1435 aa19■□□□□ 0.63
USP43-202ENST00000570475 CHD1O14646 1710 aa19■□□□□ 0.63
USP43-202ENST00000570475 NUCB1Q02818 461 aa19■□□□□ 0.63
USP43-202ENST00000570475 SMC5Q8IY18 1101 aa19■□□□□ 0.63
USP43-202ENST00000570475 CHMP4BQ9H444 224 aaKnown RBP19■□□□□ 0.63
USP43-202ENST00000570475 FCHSD2O94868 740 aa19■□□□□ 0.63
USP43-202ENST00000570475 MRE11P49959 708 aa19■□□□□ 0.63
USP43-202ENST00000570475 CYB5RLQ6IPT4 315 aa19■□□□□ 0.63
USP43-202ENST00000570475 RPGRIP1LQ68CZ1 1315 aa18.99■□□□□ 0.63
USP43-202ENST00000570475 CT47B1P0C2W7 299 aaPredicted RBP18.99■□□□□ 0.63
USP43-202ENST00000570475 CALD1Q05682 793 aaKnown RBP18.99■□□□□ 0.63
USP43-202ENST00000570475 C8orf58Q8NAV2 365 aa18.99■□□□□ 0.63
USP43-202ENST00000570475 CD109Q6YHK3 1445 aa18.99■□□□□ 0.63
USP43-202ENST00000570475 MBIPQ9NS73 344 aa18.99■□□□□ 0.63
USP43-202ENST00000570475 CASC1Q6TDU7 716 aa18.98■□□□□ 0.63
USP43-202ENST00000570475 NPATQ14207 1427 aa18.98■□□□□ 0.63
USP43-202ENST00000570475 NFE2L2Q16236 605 aa18.98■□□□□ 0.63
USP43-202ENST00000570475 MCM10Q7L590 875 aa18.98■□□□□ 0.63
USP43-202ENST00000570475 SULT6B1Q6IMI4 303 aa18.97■□□□□ 0.63
USP43-202ENST00000570475 PLEKHF1Q96S99 279 aa18.97■□□□□ 0.63
USP43-202ENST00000570475 POLKQ9UBT6 870 aa18.97■□□□□ 0.63
USP43-202ENST00000570475 CD2BP2O95400 341 aaKnown RBP18.97■□□□□ 0.63
USP43-202ENST00000570475 ZFYVE16Q7Z3T8 1539 aa18.96■□□□□ 0.63
USP43-202ENST00000570475 K7ELQ4 463 aaPredicted RBP18.96■□□□□ 0.63
USP43-202ENST00000570475 CDC45O75419 566 aa18.96■□□□□ 0.63
USP43-202ENST00000570475 LTV1Q96GA3 475 aaPredicted RBP18.96■□□□□ 0.63
USP43-202ENST00000570475 PHF23Q9BUL5 403 aaPredicted RBP18.96■□□□□ 0.63
USP43-202ENST00000570475 TRIM6-TRIM34B2RNG4 842 aa18.95■□□□□ 0.62
USP43-202ENST00000570475 VAMP4O75379 141 aa18.95■□□□□ 0.62
USP43-202ENST00000570475 TSHZ3Q63HK5 1081 aa18.95■□□□□ 0.62
USP43-202ENST00000570475 ZCCHC11Q5TAX3 1644 aaKnown RBP18.95■□□□□ 0.62
USP43-202ENST00000570475 ZNF518AQ6AHZ1 1483 aa18.95■□□□□ 0.62
USP43-202ENST00000570475 CAVIN1Q6NZI2 390 aaKnown RBP18.95■□□□□ 0.62
USP43-202ENST00000570475 RILPL2Q969X0 211 aa18.94■□□□□ 0.62
USP43-202ENST00000570475 GCC1Q96CN9 775 aa18.94■□□□□ 0.62
USP43-202ENST00000570475 GAS2L2Q8NHY3 880 aa18.94■□□□□ 0.62
USP43-202ENST00000570475 OTUD7AQ8TE49 926 aaPredicted RBP18.94■□□□□ 0.62
USP43-202ENST00000570475 API5Q9BZZ5 524 aaKnown RBP18.94■□□□□ 0.62
USP43-202ENST00000570475 LAMC1P11047 1609 aa18.93■□□□□ 0.62
USP43-202ENST00000570475 AEBP1Q8IUX7 1158 aa18.93■□□□□ 0.62
USP43-202ENST00000570475 OSCARQ8IYS5 282 aa18.93■□□□□ 0.62
USP43-202ENST00000570475 ZBTB7BO15156 539 aaPredicted RBP18.92■□□□□ 0.62
USP43-202ENST00000570475 RTF1Q92541 710 aaKnown RBP18.92■□□□□ 0.62
USP43-202ENST00000570475 SLC52A1Q9NWF4 448 aa18.92■□□□□ 0.62
USP43-202ENST00000570475 F6X3S4 739 aa18.92■□□□□ 0.62
USP43-202ENST00000570475 PLCB2Q00722 1185 aa18.91■□□□□ 0.62
USP43-202ENST00000570475 BMP2KLQ5H9B9 411 aa18.91■□□□□ 0.62
USP43-202ENST00000570475 NUTM2GQ5VZR2 741 aa18.91■□□□□ 0.62
USP43-202ENST00000570475 MPNDQ8N594 471 aa18.91■□□□□ 0.62
USP43-202ENST00000570475 SPHKAPQ2M3C7 1700 aa18.91■□□□□ 0.62
USP43-202ENST00000570475 ALDH1L2Q3SY69 923 aa18.91■□□□□ 0.62
USP43-202ENST00000570475 MRPL50Q8N5N7 158 aaKnown RBP18.91■□□□□ 0.62
USP43-202ENST00000570475 ZNF428Q96B54 188 aa18.91■□□□□ 0.62
USP43-202ENST00000570475 IQGAP1P46940 1657 aa18.91■□□□□ 0.62
USP43-202ENST00000570475 ABCA6Q8N139 1617 aa18.91■□□□□ 0.62
USP43-202ENST00000570475 SLC4A2P04920 1241 aa18.91■□□□□ 0.62
USP43-202ENST00000570475 PRPF40AO75400 957 aaKnown RBP18.9■□□□□ 0.62
USP43-202ENST00000570475 CHAMP1Q96JM3 812 aa18.9■□□□□ 0.62
USP43-202ENST00000570475 ESPNB1AK53 854 aa18.9■□□□□ 0.62
USP43-202ENST00000570475 MSNP26038 577 aaKnown RBP18.9■□□□□ 0.62
USP43-202ENST00000570475 LMOD3Q0VAK6 560 aa18.9■□□□□ 0.62
USP43-202ENST00000570475 NASPP49321 788 aaPredicted RBP18.89■□□□□ 0.61
USP43-202ENST00000570475 RNF214Q8ND24 703 aa18.89■□□□□ 0.61
USP43-202ENST00000570475 SBNO2Q9Y2G9 1366 aa18.89■□□□□ 0.61
USP43-202ENST00000570475 MAP3K4Q9Y6R4 1608 aa18.89■□□□□ 0.61
USP43-202ENST00000570475 PTMAP06454 111 aaKnown RBP18.88■□□□□ 0.61
USP43-202ENST00000570475 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms