RNA–Protein interactions for RNA: ENST00000570300.1

NPLOC4-203, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-203ENST00000570300 USP6P35125 1406 aa14.81□□□□□ -0.04
NPLOC4-203ENST00000570300 PROSER2Q86WR7 435 aaPredicted RBP14.8□□□□□ -0.04
NPLOC4-203ENST00000570300 C19orf44Q9H6X5 657 aa14.8□□□□□ -0.04
NPLOC4-203ENST00000570300 ACEP12821 1306 aa14.8□□□□□ -0.04
NPLOC4-203ENST00000570300 RGPD8O14715 1765 aaPredicted RBP14.79□□□□□ -0.04
NPLOC4-203ENST00000570300 CNGB1Q14028 1251 aaPredicted RBP14.79□□□□□ -0.04
NPLOC4-203ENST00000570300 TTC21AQ8NDW8 1320 aa14.78□□□□□ -0.04
NPLOC4-203ENST00000570300 AATKQ6ZMQ8 1374 aa14.77□□□□□ -0.04
NPLOC4-203ENST00000570300 FAM9BQ8IZU0 186 aa14.77□□□□□ -0.05
NPLOC4-203ENST00000570300 TMEM94Q12767 1356 aa14.76□□□□□ -0.05
NPLOC4-203ENST00000570300 TTC21BQ7Z4L5 1316 aa14.76□□□□□ -0.05
NPLOC4-203ENST00000570300 BLMP54132 1417 aaPredicted RBP14.75□□□□□ -0.05
NPLOC4-203ENST00000570300 USP31Q70CQ4 1352 aa14.75□□□□□ -0.05
NPLOC4-203ENST00000570300 USP54Q70EL1 1684 aa14.75□□□□□ -0.05
NPLOC4-203ENST00000570300 GGNBP2Q9H3C7 697 aa14.75□□□□□ -0.05
NPLOC4-203ENST00000570300 LRRC7Q96NW7 1537 aa14.75□□□□□ -0.05
NPLOC4-203ENST00000570300 PNPLA6Q8IY17 1366 aa14.74□□□□□ -0.05
NPLOC4-203ENST00000570300 ZBED9Q6R2W3 1325 aa14.74□□□□□ -0.05
NPLOC4-203ENST00000570300 PHF8Q9UPP1 1060 aa14.74□□□□□ -0.05
NPLOC4-203ENST00000570300 OVOS2A0A0J9YW53 1432 aa14.74□□□□□ -0.05
NPLOC4-203ENST00000570300 OVOS2Q6IE36 1432 aa14.74□□□□□ -0.05
NPLOC4-203ENST00000570300 SMG6Q86US8 1419 aaKnown RBP14.74□□□□□ -0.05
NPLOC4-203ENST00000570300 HNRNPUQ00839 825 aaKnown RBP eCLIP14.73□□□□□ -0.05
NPLOC4-203ENST00000570300 NGDNQ8NEJ9 315 aaKnown RBP14.73□□□□□ -0.05
NPLOC4-203ENST00000570300 KIF1AQ12756 1690 aa14.73□□□□□ -0.05
NPLOC4-203ENST00000570300 C1orf167Q5SNV9 1468 aa14.72□□□□□ -0.05
NPLOC4-203ENST00000570300 XIRP1Q702N8 1843 aaKnown RBP14.72□□□□□ -0.05
NPLOC4-203ENST00000570300 NUTM2FA1L443 756 aa14.72□□□□□ -0.05
NPLOC4-203ENST00000570300 DCAF8L1A6NGE4 600 aa14.72□□□□□ -0.05
NPLOC4-203ENST00000570300 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.72□□□□□ -0.052e-6■■■■□ 23
NPLOC4-203ENST00000570300 CFAP53Q96M91 514 aa14.72□□□□□ -0.05
NPLOC4-203ENST00000570300 MTHFSP49914 203 aa14.71□□□□□ -0.05
NPLOC4-203ENST00000570300 C14orf37Q86TY3 774 aa14.71□□□□□ -0.05
NPLOC4-203ENST00000570300 CADPS2Q86UW7 1296 aa14.71□□□□□ -0.05
NPLOC4-203ENST00000570300 NME9Q86XW9 330 aa14.71□□□□□ -0.05
NPLOC4-203ENST00000570300 COG3Q96JB2 828 aa14.71□□□□□ -0.05
NPLOC4-203ENST00000570300 MST1RQ04912 1400 aa14.71□□□□□ -0.05
NPLOC4-203ENST00000570300 COL3A1P02461 1466 aaPredicted RBP14.7□□□□□ -0.06
NPLOC4-203ENST00000570300 PMFBP1Q8TBY8 1022 aa14.7□□□□□ -0.06
NPLOC4-203ENST00000570300 SHPRHQ149N8 1683 aa14.7□□□□□ -0.06
NPLOC4-203ENST00000570300 WDR43Q15061 677 aaKnown RBP eCLIP14.69□□□□□ -0.06
NPLOC4-203ENST00000570300 RBM33Q96EV2 1170 aaKnown RBP14.69□□□□□ -0.06
NPLOC4-203ENST00000570300 MSH6P52701 1360 aa14.69□□□□□ -0.06
NPLOC4-203ENST00000570300 PIK3C2AO00443 1686 aa14.68□□□□□ -0.06
NPLOC4-203ENST00000570300 ATF3P18847 181 aa14.68□□□□□ -0.06
NPLOC4-203ENST00000570300 NGEFQ8N5V2 710 aa14.68□□□□□ -0.06
NPLOC4-203ENST00000570300 POLKQ9UBT6 870 aa14.68□□□□□ -0.06
NPLOC4-203ENST00000570300 ADAMTS8Q9UP79 889 aa14.68□□□□□ -0.06
NPLOC4-203ENST00000570300 CDK12Q9NYV4 1490 aaPredicted RBP14.68□□□□□ -0.06
NPLOC4-203ENST00000570300 MAP2P11137 1827 aaKnown RBP14.67□□□□□ -0.06
NPLOC4-203ENST00000570300 ESCO1Q5FWF5 840 aa14.67□□□□□ -0.06
NPLOC4-203ENST00000570300 ZNF335Q9H4Z2 1342 aaPredicted RBP14.66□□□□□ -0.06
NPLOC4-203ENST00000570300 KIF24Q5T7B8 1368 aa14.66□□□□□ -0.06
NPLOC4-203ENST00000570300 TNNT2P45379 298 aaPredicted RBP14.66□□□□□ -0.06
NPLOC4-203ENST00000570300 MARF1Q9Y4F3 1742 aaKnown RBP14.64□□□□□ -0.07
NPLOC4-203ENST00000570300 ORAI2Q96SN7 254 aa14.64□□□□□ -0.07
NPLOC4-203ENST00000570300 ZRANB1Q9UGI0 708 aa14.64□□□□□ -0.07
NPLOC4-203ENST00000570300 TRPM3Q9HCF6 1732 aaPredicted RBP14.63□□□□□ -0.07
NPLOC4-203ENST00000570300 NUDCQ9Y266 331 aa14.63□□□□□ -0.07
NPLOC4-203ENST00000570300 PSME1Q06323 249 aa14.62□□□□□ -0.07
NPLOC4-203ENST00000570300 PDE3BQ13370 1112 aa14.62□□□□□ -0.07
NPLOC4-203ENST00000570300 SBNO1A3KN83 1393 aa14.61□□□□□ -0.07
NPLOC4-203ENST00000570300 DIAPH1O60610 1272 aaKnown RBP14.61□□□□□ -0.07
NPLOC4-203ENST00000570300 NLRP6P59044 892 aa14.6□□□□□ -0.07
NPLOC4-203ENST00000570300 LTBP4Q8N2S1 1624 aa14.59□□□□□ -0.07
NPLOC4-203ENST00000570300 ALS2Q96Q42 1657 aa14.59□□□□□ -0.07
NPLOC4-203ENST00000570300 FOXO3O43524 673 aa14.59□□□□□ -0.07
NPLOC4-203ENST00000570300 ABTB2Q8N961 1025 aa14.59□□□□□ -0.07
NPLOC4-203ENST00000570300 NPHP3Q7Z494 1330 aa14.59□□□□□ -0.07
NPLOC4-203ENST00000570300 PHRF1Q9P1Y6 1649 aaKnown RBP14.59□□□□□ -0.07
NPLOC4-203ENST00000570300 SLIT3O75094 1523 aa14.58□□□□□ -0.08
NPLOC4-203ENST00000570300 KRT28Q7Z3Y7 464 aa14.58□□□□□ -0.08
NPLOC4-203ENST00000570300 RUNDC1Q96C34 613 aa14.58□□□□□ -0.08
NPLOC4-203ENST00000570300 PNNQ9H307 717 aaKnown RBP14.58□□□□□ -0.08
NPLOC4-203ENST00000570300 EMILIN1Q9Y6C2 1016 aa14.58□□□□□ -0.08
NPLOC4-203ENST00000570300 USP19O94966 1318 aa14.58□□□□□ -0.08
NPLOC4-203ENST00000570300 ZNF521Q96K83 1311 aa14.58□□□□□ -0.08
NPLOC4-203ENST00000570300 NFAT5O94916 1531 aa14.57□□□□□ -0.08
NPLOC4-203ENST00000570300 IL13P35225 146 aa14.57□□□□□ -0.08
NPLOC4-203ENST00000570300 KCNH5Q8NCM2 988 aa14.57□□□□□ -0.08
NPLOC4-203ENST00000570300 SLAIN2Q9P270 581 aa14.57□□□□□ -0.08
NPLOC4-203ENST00000570300 RTL1A6NKG5 1358 aa14.57□□□□□ -0.08
NPLOC4-203ENST00000570300 FLT4P35916 1363 aa14.57□□□□□ -0.08
NPLOC4-203ENST00000570300 IQSEC2Q5JU85 1478 aa14.57□□□□□ -0.08
NPLOC4-203ENST00000570300 PXDNQ92626 1479 aa14.57□□□□□ -0.08
NPLOC4-203ENST00000570300 PEAK1Q9H792 1746 aa14.56□□□□□ -0.08
NPLOC4-203ENST00000570300 FCHSD2O94868 740 aa14.56□□□□□ -0.08
NPLOC4-203ENST00000570300 MAP3K19Q56UN5 1328 aa14.56□□□□□ -0.08
NPLOC4-203ENST00000570300 PAK3O75914 559 aaPredicted RBP14.55□□□□□ -0.08
NPLOC4-203ENST00000570300 U2AF1L5P0DN76 240 aaPredicted RBP14.55□□□□□ -0.08
NPLOC4-203ENST00000570300 FBLN1P23142 703 aa14.55□□□□□ -0.08
NPLOC4-203ENST00000570300 U2AF1Q01081 240 aaKnown RBP eCLIP14.55□□□□□ -0.08
NPLOC4-203ENST00000570300 RRS1Q15050 365 aaKnown RBP14.55□□□□□ -0.08
NPLOC4-203ENST00000570300 CCDC27Q2M243 656 aa14.55□□□□□ -0.08
NPLOC4-203ENST00000570300 BRINP3Q76B58 766 aa14.55□□□□□ -0.08
NPLOC4-203ENST00000570300 PLEKHF1Q96S99 279 aa14.55□□□□□ -0.08
NPLOC4-203ENST00000570300 RGPD1P0DJD0 1748 aa14.54□□□□□ -0.08
NPLOC4-203ENST00000570300 MED1Q15648 1581 aaPredicted RBP14.53□□□□□ -0.08
NPLOC4-203ENST00000570300 SOS2Q07890 1332 aaPredicted RBP14.53□□□□□ -0.08
NPLOC4-203ENST00000570300 APAF1O14727 1248 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms