RNA–Protein interactions for RNA: ENST00000570103.5

CFDP1-209, Transcript of craniofacial development protein 1, humanhuman

TSL 2

Gene CFDP1, Length 663 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-209ENST00000570103 RETREG3Q86VR2 466 aa9.58□□□□□ -0.88
CFDP1-209ENST00000570103 TLL2Q9Y6L7 1015 aa9.58□□□□□ -0.88
CFDP1-209ENST00000570103 GDF11O95390 407 aa9.57□□□□□ -0.88
CFDP1-209ENST00000570103 RASSF7Q02833 373 aa9.57□□□□□ -0.88
CFDP1-209ENST00000570103 MPNDQ8N594 471 aa9.57□□□□□ -0.88
CFDP1-209ENST00000570103 PLEKHG3A1L390 1219 aa9.56□□□□□ -0.88
CFDP1-209ENST00000570103 TIMP2P16035 220 aa9.56□□□□□ -0.88
CFDP1-209ENST00000570103 CCNYL3P0C7X3 344 aa9.55□□□□□ -0.88
CFDP1-209ENST00000570103 ADH1CP00326 375 aa9.54□□□□□ -0.88
CFDP1-209ENST00000570103 WDR4P57081 412 aaKnown RBP9.54□□□□□ -0.88
CFDP1-209ENST00000570103 PPFIA3O75145 1194 aa9.53□□□□□ -0.88
CFDP1-209ENST00000570103 MS4A1P11836 297 aa9.53□□□□□ -0.88
CFDP1-209ENST00000570103 VARSP26640 1264 aaKnown RBP9.53□□□□□ -0.88
CFDP1-209ENST00000570103 LINC01559Q495D7 138 aa9.53□□□□□ -0.88
CFDP1-209ENST00000570103 GPIHBP1Q8IV16 184 aa9.53□□□□□ -0.88
CFDP1-209ENST00000570103 KLF16Q9BXK1 252 aaPredicted RBP9.53□□□□□ -0.88
CFDP1-209ENST00000570103 UNC93B1Q9H1C4 597 aa9.53□□□□□ -0.88
CFDP1-209ENST00000570103 MAN1A2O60476 641 aa9.52□□□□□ -0.89
CFDP1-209ENST00000570103 ZC3H15Q8WU90 426 aaKnown RBP9.52□□□□□ -0.89
CFDP1-209ENST00000570103 BAP1Q92560 729 aa9.52□□□□□ -0.89
CFDP1-209ENST00000570103 THOC2Q8NI27 1593 aaKnown RBP9.51□□□□□ -0.89
CFDP1-209ENST00000570103 RNF225M0QZC1 329 aaPredicted RBP9.51□□□□□ -0.89
CFDP1-209ENST00000570103 MDM2Q00987 491 aaPredicted RBP9.51□□□□□ -0.89
CFDP1-209ENST00000570103 EVA1BQ9NVM1 165 aa9.51□□□□□ -0.89
CFDP1-209ENST00000570103 PTPRNQ16849 979 aa9.5□□□□□ -0.89
CFDP1-209ENST00000570103 ADAMTS8Q9UP79 889 aa9.5□□□□□ -0.89
CFDP1-209ENST00000570103 ZNF511Q8NB15 262 aa9.49□□□□□ -0.89
CFDP1-209ENST00000570103 MAP2K5Q13163 448 aa9.48□□□□□ -0.89
CFDP1-209ENST00000570103 KCNH2Q12809 1159 aa9.47□□□□□ -0.89
CFDP1-209ENST00000570103 C6orf229H3BNL8 230 aa9.46□□□□□ -0.9
CFDP1-209ENST00000570103 KRT76Q01546 638 aa9.46□□□□□ -0.9
CFDP1-209ENST00000570103 NUTM1Q86Y26 1132 aa9.46□□□□□ -0.9
CFDP1-209ENST00000570103 PCDHGC3Q9UN70 934 aa9.46□□□□□ -0.9
CFDP1-209ENST00000570103 NESP48681 1621 aa9.45□□□□□ -0.9
CFDP1-209ENST00000570103 KIF21AQ7Z4S6 1674 aa9.45□□□□□ -0.9
CFDP1-209ENST00000570103 FDX1P10109 184 aa9.45□□□□□ -0.9
CFDP1-209ENST00000570103 C6orf118Q5T5N4 469 aa9.45□□□□□ -0.9
CFDP1-209ENST00000570103 IRF6O14896 467 aa9.44□□□□□ -0.9
CFDP1-209ENST00000570103 ZIC2O95409 532 aaPredicted RBP9.44□□□□□ -0.9
CFDP1-209ENST00000570103 FAM174AQ8TBP5 190 aa9.44□□□□□ -0.9
CFDP1-209ENST00000570103 ZFAND3Q9H8U3 227 aa9.44□□□□□ -0.9
CFDP1-209ENST00000570103 NCAPD3P42695 1498 aa9.44□□□□□ -0.9
CFDP1-209ENST00000570103 GPR161Q8N6U8 529 aaKnown RBP9.43□□□□□ -0.9
CFDP1-209ENST00000570103 ITPKCQ96DU7 683 aa9.43□□□□□ -0.9
CFDP1-209ENST00000570103 CNTNAP3BQ96NU0 1288 aa9.43□□□□□ -0.9
CFDP1-209ENST00000570103 CDK15Q96Q40 435 aa9.43□□□□□ -0.9
CFDP1-209ENST00000570103 CNTNAP3Q9BZ76 1288 aa9.43□□□□□ -0.9
CFDP1-209ENST00000570103 FAM217BQ9NTX9 383 aaPredicted RBP9.43□□□□□ -0.9
CFDP1-209ENST00000570103 IGHA1P01876 353 aa9.42□□□□□ -0.9
CFDP1-209ENST00000570103 SLC24A3Q9HC58 644 aa9.42□□□□□ -0.9
CFDP1-209ENST00000570103 ZMYND10O75800 440 aa9.41□□□□□ -0.9
CFDP1-209ENST00000570103 GPAT2Q6NUI2 795 aa9.41□□□□□ -0.9
CFDP1-209ENST00000570103 GPCPD1Q9NPB8 672 aa9.41□□□□□ -0.9
CFDP1-209ENST00000570103 DNMT3AQ9Y6K1 912 aaPredicted RBP9.41□□□□□ -0.9
CFDP1-209ENST00000570103 UPP2O95045 317 aa9.4□□□□□ -0.9
CFDP1-209ENST00000570103 BMP2P12643 396 aa9.4□□□□□ -0.9
CFDP1-209ENST00000570103 DNMT3LQ9UJW3 386 aa9.4□□□□□ -0.9
CFDP1-209ENST00000570103 SOS2Q07890 1332 aaPredicted RBP9.39□□□□□ -0.91
CFDP1-209ENST00000570103 CLCN1P35523 988 aa9.39□□□□□ -0.91
CFDP1-209ENST00000570103 NR5A1Q13285 461 aa9.39□□□□□ -0.91
CFDP1-209ENST00000570103 ZNF385CQ66K41 422 aaPredicted RBP9.39□□□□□ -0.91
CFDP1-209ENST00000570103 LINC00528Q8N1L1 170 aa9.39□□□□□ -0.91
CFDP1-209ENST00000570103 SMARCA2P51531 1590 aa9.38□□□□□ -0.91
CFDP1-209ENST00000570103 MINK1Q8N4C8 1332 aaPredicted RBP9.38□□□□□ -0.91
CFDP1-209ENST00000570103 HMGXB3Q12766 1538 aa9.38□□□□□ -0.91
CFDP1-209ENST00000570103 NR3C2P08235 984 aa9.38□□□□□ -0.91
CFDP1-209ENST00000570103 ARID5BQ14865 1188 aa9.38□□□□□ -0.91
CFDP1-209ENST00000570103 DESI1Q6ICB0 168 aa9.38□□□□□ -0.91
CFDP1-209ENST00000570103 PRR7Q8TB68 274 aa9.38□□□□□ -0.91
CFDP1-209ENST00000570103 IRS1P35568 1242 aa9.37□□□□□ -0.91
CFDP1-209ENST00000570103 BARGINQ6ZT62 677 aa9.37□□□□□ -0.91
CFDP1-209ENST00000570103 MEIOBQ8N635 442 aa9.37□□□□□ -0.91
CFDP1-209ENST00000570103 COL25A1Q9BXS0 654 aaPredicted RBP9.37□□□□□ -0.91
CFDP1-209ENST00000570103 LAMC3Q9Y6N6 1575 aa9.37□□□□□ -0.91
CFDP1-209ENST00000570103 BRPF1P55201 1214 aaPredicted RBP9.36□□□□□ -0.91
CFDP1-209ENST00000570103 SVOPQ8N4V2 548 aa9.36□□□□□ -0.91
CFDP1-209ENST00000570103 GRM5P41594 1212 aa9.35□□□□□ -0.91
CFDP1-209ENST00000570103 FOXK2Q01167 660 aa9.35□□□□□ -0.91
CFDP1-209ENST00000570103 NANOS1Q8WY41 292 aaKnown RBP9.35□□□□□ -0.91
CFDP1-209ENST00000570103 FOXJ1Q92949 421 aa9.35□□□□□ -0.91
CFDP1-209ENST00000570103 BAZ1AQ9NRL2 1556 aaPredicted RBP9.35□□□□□ -0.91
CFDP1-209ENST00000570103 ATAD2BQ9ULI0 1458 aa9.34□□□□□ -0.91
CFDP1-209ENST00000570103 SPTLC1O15269 473 aa9.34□□□□□ -0.91
CFDP1-209ENST00000570103 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.34□□□□□ -0.91
CFDP1-209ENST00000570103 XP32Q5T750 250 aa9.34□□□□□ -0.91
CFDP1-209ENST00000570103 CCDC102AQ96A19 550 aa9.34□□□□□ -0.91
CFDP1-209ENST00000570103 SPDYE5A6NIY4 337 aa9.33□□□□□ -0.92
CFDP1-209ENST00000570103 ARHGEF15O94989 841 aa9.33□□□□□ -0.92
CFDP1-209ENST00000570103 CTHP32929 405 aa9.33□□□□□ -0.92
CFDP1-209ENST00000570103 KANK3Q6NY19 840 aa9.33□□□□□ -0.92
CFDP1-209ENST00000570103 SLURP2P0DP57 97 aa9.32□□□□□ -0.92
CFDP1-209ENST00000570103 NDUFV2P19404 249 aa9.32□□□□□ -0.92
CFDP1-209ENST00000570103 PTSQ03393 145 aa9.32□□□□□ -0.92
CFDP1-209ENST00000570103 MTMR2Q13614 643 aa9.32□□□□□ -0.92
CFDP1-209ENST00000570103 NEUROD2Q15784 382 aa9.32□□□□□ -0.92
CFDP1-209ENST00000570103 RNFT1Q5M7Z0 435 aa9.32□□□□□ -0.92
CFDP1-209ENST00000570103 WHAMMQ8TF30 809 aa9.32□□□□□ -0.92
CFDP1-209ENST00000570103 SPIRE2Q8WWL2 714 aa9.32□□□□□ -0.92
CFDP1-209ENST00000570103 LYPD8Q6UX82 237 aa9.31□□□□□ -0.92
CFDP1-209ENST00000570103 KRI1Q8N9T8 703 aaKnown RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms