RNA–Protein interactions for RNA: ENST00000570098.2

CHRFAM7A-207, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5

Gene CHRFAM7A, Length 316 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-207ENST00000570098 SPATA31A3Q5VYP0 1347 aa3.24□□□□□ -1.89
CHRFAM7A-207ENST00000570098 MINK1Q8N4C8 1332 aaPredicted RBP3.24□□□□□ -1.89
CHRFAM7A-207ENST00000570098 PRR36Q9H6K5 1346 aa3.24□□□□□ -1.89
CHRFAM7A-207ENST00000570098 RALGAPBQ86X10 1494 aa3.24□□□□□ -1.89
CHRFAM7A-207ENST00000570098 FOXO3O43524 673 aa3.24□□□□□ -1.89
CHRFAM7A-207ENST00000570098 HRCP23327 699 aa3.24□□□□□ -1.89
CHRFAM7A-207ENST00000570098 RXRBP28702 533 aa3.24□□□□□ -1.89
CHRFAM7A-207ENST00000570098 RBM6P78332 1123 aaKnown RBP3.24□□□□□ -1.89
CHRFAM7A-207ENST00000570098 KRT28Q7Z3Y7 464 aa3.24□□□□□ -1.89
CHRFAM7A-207ENST00000570098 DCAF11Q8TEB1 546 aa3.24□□□□□ -1.89
CHRFAM7A-207ENST00000570098 UPF1Q92900 1129 aaKnown RBP eCLIP3.24□□□□□ -1.89
CHRFAM7A-207ENST00000570098 SIRT1Q96EB6 747 aa3.24□□□□□ -1.89
CHRFAM7A-207ENST00000570098 NGLY1Q96IV0 654 aa3.24□□□□□ -1.89
CHRFAM7A-207ENST00000570098 PRAM1Q96QH2 718 aa3.24□□□□□ -1.89
CHRFAM7A-207ENST00000570098 QTRT2Q9H974 415 aaKnown RBP3.24□□□□□ -1.89
CHRFAM7A-207ENST00000570098 PHF8Q9UPP1 1060 aa3.24□□□□□ -1.89
CHRFAM7A-207ENST00000570098 TRAK1Q9UPV9 953 aa3.24□□□□□ -1.89
CHRFAM7A-207ENST00000570098 CASZ1Q86V15 1759 aa3.24□□□□□ -1.89
CHRFAM7A-207ENST00000570098 COL24A1Q17RW2 1714 aa3.24□□□□□ -1.89
CHRFAM7A-207ENST00000570098 SBNO1A3KN83 1393 aa3.24□□□□□ -1.89
CHRFAM7A-207ENST00000570098 SLIT3O75094 1523 aa3.24□□□□□ -1.89
CHRFAM7A-207ENST00000570098 NHSQ6T4R5 1651 aa3.24□□□□□ -1.89
CHRFAM7A-207ENST00000570098 PLEKHG5O94827 1062 aa3.23□□□□□ -1.89
CHRFAM7A-207ENST00000570098 FNBP4Q8N3X1 1017 aaPredicted RBP3.23□□□□□ -1.89
CHRFAM7A-207ENST00000570098 PMFBP1Q8TBY8 1022 aa3.23□□□□□ -1.89
CHRFAM7A-207ENST00000570098 CABLES1Q8TDN4 633 aa3.23□□□□□ -1.89
CHRFAM7A-207ENST00000570098 HIRIP3Q9BW71 556 aaPredicted RBP3.23□□□□□ -1.89
CHRFAM7A-207ENST00000570098 POGKQ9P215 609 aa3.23□□□□□ -1.89
CHRFAM7A-207ENST00000570098 USP21Q9UK80 565 aa3.23□□□□□ -1.89
CHRFAM7A-207ENST00000570098 CAMTA1Q9Y6Y1 1673 aa3.23□□□□□ -1.89
CHRFAM7A-207ENST00000570098 ARHGEF10O15013 1369 aa3.23□□□□□ -1.89
CHRFAM7A-207ENST00000570098 EIF3AQ14152 1382 aaKnown RBP3.23□□□□□ -1.89
CHRFAM7A-207ENST00000570098 CACNA1SQ13698 1873 aa3.22□□□□□ -1.89
CHRFAM7A-207ENST00000570098 WASLO00401 505 aaPredicted RBP3.22□□□□□ -1.89
CHRFAM7A-207ENST00000570098 NBPF1Q3BBV0 1214 aa3.22□□□□□ -1.89
CHRFAM7A-207ENST00000570098 TRPC5Q9UL62 973 aaPredicted RBP3.22□□□□□ -1.89
CHRFAM7A-207ENST00000570098 DLG5Q8TDM6 1919 aa3.22□□□□□ -1.89
CHRFAM7A-207ENST00000570098 NFAT5O94916 1531 aa3.22□□□□□ -1.89
CHRFAM7A-207ENST00000570098 ATAD2Q6PL18 1390 aa3.22□□□□□ -1.89
CHRFAM7A-207ENST00000570098 UBR3Q6ZT12 1888 aa3.22□□□□□ -1.89
CHRFAM7A-207ENST00000570098 PKD1L3Q7Z443 1732 aa3.22□□□□□ -1.89
CHRFAM7A-207ENST00000570098 TOGARAM1Q9Y4F4 1720 aa3.22□□□□□ -1.89
CHRFAM7A-207ENST00000570098 PPIP5K1Q6PFW1 1433 aa3.21□□□□□ -1.9
CHRFAM7A-207ENST00000570098 SCN11AQ9UI33 1791 aa3.21□□□□□ -1.9
CHRFAM7A-207ENST00000570098 PSME1Q06323 249 aa3.21□□□□□ -1.9
CHRFAM7A-207ENST00000570098 LMOD2Q6P5Q4 547 aa3.21□□□□□ -1.9
CHRFAM7A-207ENST00000570098 UNC5CLQ8IV45 518 aa3.21□□□□□ -1.9
CHRFAM7A-207ENST00000570098 NUDT16Q96DE0 195 aaKnown RBP3.21□□□□□ -1.9
CHRFAM7A-207ENST00000570098 SIN3AQ96ST3 1273 aa3.21□□□□□ -1.9
CHRFAM7A-207ENST00000570098 POLR3AO14802 1390 aaPredicted RBP3.21□□□□□ -1.9
CHRFAM7A-207ENST00000570098 GPRASP1Q5JY77 1395 aa3.21□□□□□ -1.9
CHRFAM7A-207ENST00000570098 C5P01031 1676 aa3.2□□□□□ -1.9
CHRFAM7A-207ENST00000570098 ACEP12821 1306 aa3.2□□□□□ -1.9
CHRFAM7A-207ENST00000570098 ABCC6O95255 1503 aa3.2□□□□□ -1.9
CHRFAM7A-207ENST00000570098 FAM83GA6ND36 823 aa3.2□□□□□ -1.9
CHRFAM7A-207ENST00000570098 HAP1P54257 671 aaPredicted RBP3.2□□□□□ -1.9
CHRFAM7A-207ENST00000570098 NGDNQ8NEJ9 315 aaKnown RBP3.2□□□□□ -1.9
CHRFAM7A-207ENST00000570098 L3MBTL2Q969R5 705 aa3.2□□□□□ -1.9
CHRFAM7A-207ENST00000570098 GJD4Q96KN9 370 aaPredicted RBP3.2□□□□□ -1.9
CHRFAM7A-207ENST00000570098 STAC3Q96MF2 364 aa3.2□□□□□ -1.9
CHRFAM7A-207ENST00000570098 CDK19Q9BWU1 502 aa3.2□□□□□ -1.9
CHRFAM7A-207ENST00000570098 COL5A2P05997 1499 aaPredicted RBP3.2□□□□□ -1.9
CHRFAM7A-207ENST00000570098 BRCA1P38398 1863 aaKnown RBP3.2□□□□□ -1.9
CHRFAM7A-207ENST00000570098 MYH14Q7Z406 1995 aaKnown RBP3.2□□□□□ -1.9
CHRFAM7A-207ENST00000570098 CENPJQ9HC77 1338 aaPredicted RBP3.19□□□□□ -1.9
CHRFAM7A-207ENST00000570098 USP6P35125 1406 aa3.19□□□□□ -1.9
CHRFAM7A-207ENST00000570098 BLMP54132 1417 aaPredicted RBP3.19□□□□□ -1.9
CHRFAM7A-207ENST00000570098 SSH2Q76I76 1423 aa3.19□□□□□ -1.9
CHRFAM7A-207ENST00000570098 PAPPAQ13219 1627 aa3.19□□□□□ -1.9
CHRFAM7A-207ENST00000570098 PAK3O75914 559 aaPredicted RBP3.19□□□□□ -1.9
CHRFAM7A-207ENST00000570098 VPS72Q15906 364 aa3.19□□□□□ -1.9
CHRFAM7A-207ENST00000570098 NBPF8Q3BBV2 869 aa3.19□□□□□ -1.9
CHRFAM7A-207ENST00000570098 NUTM2GQ5VZR2 741 aa3.19□□□□□ -1.9
CHRFAM7A-207ENST00000570098 BTG4Q9NY30 223 aa3.19□□□□□ -1.9
CHRFAM7A-207ENST00000570098 ZRANB1Q9UGI0 708 aa3.19□□□□□ -1.9
CHRFAM7A-207ENST00000570098 CCDC9Q9Y3X0 531 aaKnown RBP3.19□□□□□ -1.9
CHRFAM7A-207ENST00000570098 KIAA0232Q92628 1395 aa3.19□□□□□ -1.9
CHRFAM7A-207ENST00000570098 CD163L1Q9NR16 1453 aa3.19□□□□□ -1.9
CHRFAM7A-207ENST00000570098 SRCAPQ6ZRS2 3230 aa3.19□□□□□ -1.9
CHRFAM7A-207ENST00000570098 COL5A3P25940 1745 aaPredicted RBP3.19□□□□□ -1.9
CHRFAM7A-207ENST00000570098 USP19O94966 1318 aa3.19□□□□□ -1.9
CHRFAM7A-207ENST00000570098 SPATA31A5Q5VU36 1347 aa3.19□□□□□ -1.9
CHRFAM7A-207ENST00000570098 SPATA31A7Q8IWB4 1347 aa3.19□□□□□ -1.9
CHRFAM7A-207ENST00000570098 SBF1O95248 1867 aa3.18□□□□□ -1.9
CHRFAM7A-207ENST00000570098 SIPA1L3O60292 1781 aaPredicted RBP3.18□□□□□ -1.9
CHRFAM7A-207ENST00000570098 ROCK2O75116 1388 aaKnown RBP3.18□□□□□ -1.9
CHRFAM7A-207ENST00000570098 PLEKHG3A1L390 1219 aa3.18□□□□□ -1.9
CHRFAM7A-207ENST00000570098 NEUROD1Q13562 356 aa3.18□□□□□ -1.9
CHRFAM7A-207ENST00000570098 CHRNA2Q15822 529 aa3.18□□□□□ -1.9
CHRFAM7A-207ENST00000570098 FAM98CQ17RN3 349 aaKnown RBP3.18□□□□□ -1.9
CHRFAM7A-207ENST00000570098 SEPT12Q8IYM1 358 aa3.18□□□□□ -1.9
CHRFAM7A-207ENST00000570098 CABP2Q9NPB3 220 aa3.18□□□□□ -1.9
CHRFAM7A-207ENST00000570098 CCDC61Q9Y6R9 512 aa3.18□□□□□ -1.9
CHRFAM7A-207ENST00000570098 AFDNP55196 1824 aaKnown RBP3.18□□□□□ -1.9
CHRFAM7A-207ENST00000570098 C4AP0C0L4 1744 aa3.18□□□□□ -1.9
CHRFAM7A-207ENST00000570098 C4BP0C0L5 1744 aa3.18□□□□□ -1.9
CHRFAM7A-207ENST00000570098 CPSF1Q10570 1443 aaKnown RBP3.18□□□□□ -1.9
CHRFAM7A-207ENST00000570098 SPATA31A1Q5TZJ5 1347 aa3.18□□□□□ -1.9
CHRFAM7A-207ENST00000570098 N4BP2Q86UW6 1770 aaPredicted RBP3.17□□□□□ -1.9
CHRFAM7A-207ENST00000570098 KIF13BQ9NQT8 1826 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms