RNA–Protein interactions for RNA: ENST00000569454.1

CDH13-213, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-213ENST00000569454 OTUD5Q96G74 571 aa7.55□□□□□ -1.2
CDH13-213ENST00000569454 CFAP53Q96M91 514 aa7.55□□□□□ -1.2
CDH13-213ENST00000569454 ESF1Q9H501 851 aaKnown RBP7.55□□□□□ -1.2
CDH13-213ENST00000569454 STAG3Q9UJ98 1225 aa7.55□□□□□ -1.2
CDH13-213ENST00000569454 ABCC11Q96J66 1382 aa7.55□□□□□ -1.2
CDH13-213ENST00000569454 RIMS2Q9UQ26 1411 aa7.54□□□□□ -1.2
CDH13-213ENST00000569454 IRX6P78412 446 aaPredicted RBP7.54□□□□□ -1.2
CDH13-213ENST00000569454 MORC1Q86VD1 984 aa7.54□□□□□ -1.2
CDH13-213ENST00000569454 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.54□□□□□ -1.2
CDH13-213ENST00000569454 TERF2IPQ9NYB0 399 aa7.54□□□□□ -1.2
CDH13-213ENST00000569454 MYO5BQ9ULV0 1848 aa7.54□□□□□ -1.2
CDH13-213ENST00000569454 ZNF521Q96K83 1311 aa7.53□□□□□ -1.2
CDH13-213ENST00000569454 KNDC1Q76NI1 1749 aa7.53□□□□□ -1.2
CDH13-213ENST00000569454 ANKRD26Q9UPS8 1709 aa7.53□□□□□ -1.2
CDH13-213ENST00000569454 GOLGA2Q08379 1002 aa7.53□□□□□ -1.2
CDH13-213ENST00000569454 TMEM132EQ6IEE7 984 aa7.53□□□□□ -1.2
CDH13-213ENST00000569454 ZNF579Q8NAF0 562 aaKnown RBP7.53□□□□□ -1.2
CDH13-213ENST00000569454 CCDC136Q96JN2 1154 aa7.53□□□□□ -1.2
CDH13-213ENST00000569454 CARD14Q9BXL6 1004 aa7.53□□□□□ -1.2
CDH13-213ENST00000569454 ADAMTS8Q9UP79 889 aa7.53□□□□□ -1.2
CDH13-213ENST00000569454 ATP7BP35670 1465 aa7.53□□□□□ -1.2
CDH13-213ENST00000569454 TECPR2O15040 1411 aa7.52□□□□□ -1.2
CDH13-213ENST00000569454 NLRP1Q9C000 1473 aa7.52□□□□□ -1.21
CDH13-213ENST00000569454 POTEGQ6S5H5 508 aa7.52□□□□□ -1.21
CDH13-213ENST00000569454 FAM135BQ49AJ0 1406 aa7.52□□□□□ -1.21
CDH13-213ENST00000569454 SHPRHQ149N8 1683 aa7.51□□□□□ -1.21
CDH13-213ENST00000569454 NKTRP30414 1462 aaKnown RBP7.51□□□□□ -1.21
CDH13-213ENST00000569454 TNRQ92752 1358 aa7.51□□□□□ -1.21
CDH13-213ENST00000569454 PLEKHH1Q9ULM0 1364 aa7.51□□□□□ -1.21
CDH13-213ENST00000569454 E9PSI1 815 aa7.51□□□□□ -1.21
CDH13-213ENST00000569454 SIRT1Q96EB6 747 aa7.51□□□□□ -1.21
CDH13-213ENST00000569454 POGKQ9P215 609 aa7.51□□□□□ -1.21
CDH13-213ENST00000569454 CPS1P31327 1500 aa7.51□□□□□ -1.21
CDH13-213ENST00000569454 A0A1W2PP64 1363 aa7.5□□□□□ -1.21
CDH13-213ENST00000569454 ZMYM3Q14202 1370 aa7.5□□□□□ -1.21
CDH13-213ENST00000569454 SRPK2P78362 688 aaKnown RBP7.5□□□□□ -1.21
CDH13-213ENST00000569454 B4GALNT3Q6L9W6 998 aa7.5□□□□□ -1.21
CDH13-213ENST00000569454 HDGFL2Q7Z4V5 671 aaPredicted RBP7.5□□□□□ -1.21
CDH13-213ENST00000569454 SLC12A5Q9H2X9 1139 aa7.5□□□□□ -1.21
CDH13-213ENST00000569454 RBM19Q9Y4C8 960 aaKnown RBP7.5□□□□□ -1.21
CDH13-213ENST00000569454 ADAMTSL3P82987 1691 aa7.5□□□□□ -1.21
CDH13-213ENST00000569454 FANCIQ9NVI1 1328 aa7.5□□□□□ -1.21
CDH13-213ENST00000569454 NRXN3Q9Y4C0 1643 aa7.49□□□□□ -1.21
CDH13-213ENST00000569454 SLFN5Q08AF3 891 aa7.49□□□□□ -1.21
CDH13-213ENST00000569454 CCDC27Q2M243 656 aa7.49□□□□□ -1.21
CDH13-213ENST00000569454 DUSP27Q5VZP5 1158 aa7.49□□□□□ -1.21
CDH13-213ENST00000569454 FBXO31Q5XUX0 539 aaPredicted RBP7.49□□□□□ -1.21
CDH13-213ENST00000569454 RUNDC1Q96C34 613 aa7.49□□□□□ -1.21
CDH13-213ENST00000569454 PRAM1Q96QH2 718 aa7.49□□□□□ -1.21
CDH13-213ENST00000569454 ADGRB2O60241 1585 aa7.49□□□□□ -1.21
CDH13-213ENST00000569454 AAMPQ13685 434 aa7.48□□□□□ -1.21
CDH13-213ENST00000569454 CDC42BPGQ6DT37 1551 aa7.48□□□□□ -1.21
CDH13-213ENST00000569454 TRMT2AQ8IZ69 625 aaKnown RBP7.48□□□□□ -1.21
CDH13-213ENST00000569454 PNNQ9H307 717 aaKnown RBP7.48□□□□□ -1.21
CDH13-213ENST00000569454 KIF20BQ96Q89 1820 aa7.48□□□□□ -1.21
CDH13-213ENST00000569454 TMEM2Q9UHN6 1383 aa7.47□□□□□ -1.21
CDH13-213ENST00000569454 UBR1Q8IWV7 1749 aa7.47□□□□□ -1.21
CDH13-213ENST00000569454 DIP2AQ14689 1571 aa7.47□□□□□ -1.21
CDH13-213ENST00000569454 EDC4Q6P2E9 1401 aaKnown RBP7.47□□□□□ -1.21
CDH13-213ENST00000569454 WDR63Q8IWG1 891 aa7.47□□□□□ -1.21
CDH13-213ENST00000569454 CDCA7LQ96GN5 454 aa7.47□□□□□ -1.21
CDH13-213ENST00000569454 SALL2Q9Y467 1007 aaPredicted RBP7.47□□□□□ -1.21
CDH13-213ENST00000569454 CD163L1Q9NR16 1453 aa7.47□□□□□ -1.21
CDH13-213ENST00000569454 PLEKHG1Q9ULL1 1385 aa7.46□□□□□ -1.21
CDH13-213ENST00000569454 APAF1O14727 1248 aa7.46□□□□□ -1.22
CDH13-213ENST00000569454 CT47B1P0C2W7 299 aaPredicted RBP7.46□□□□□ -1.22
CDH13-213ENST00000569454 NUTM2DQ5VT03 806 aaPredicted RBP7.46□□□□□ -1.22
CDH13-213ENST00000569454 CABP2Q9NPB3 220 aa7.46□□□□□ -1.22
CDH13-213ENST00000569454 STK26Q9P289 416 aa7.46□□□□□ -1.22
CDH13-213ENST00000569454 COL3A1P02461 1466 aaPredicted RBP7.46□□□□□ -1.22
CDH13-213ENST00000569454 MINK1Q8N4C8 1332 aaPredicted RBP7.46□□□□□ -1.22
CDH13-213ENST00000569454 TCERG1O14776 1098 aaKnown RBP7.45□□□□□ -1.22
CDH13-213ENST00000569454 MS4A1P11836 297 aa7.45□□□□□ -1.22
CDH13-213ENST00000569454 MTHFSP49914 203 aa7.45□□□□□ -1.22
CDH13-213ENST00000569454 MYH16Q9H6N6 1097 aa7.45□□□□□ -1.22
CDH13-213ENST00000569454 SLIT1O75093 1534 aa7.45□□□□□ -1.22
CDH13-213ENST00000569454 PNPLA6Q8IY17 1366 aa7.45□□□□□ -1.22
CDH13-213ENST00000569454 CPSF1Q10570 1443 aaKnown RBP7.44□□□□□ -1.22
CDH13-213ENST00000569454 ARHGAP23Q9P227 1491 aa7.44□□□□□ -1.22
CDH13-213ENST00000569454 POTEB2H3BUK9 544 aa7.44□□□□□ -1.22
CDH13-213ENST00000569454 MLECQ14165 292 aa7.44□□□□□ -1.22
CDH13-213ENST00000569454 WWC1Q8IX03 1113 aa7.44□□□□□ -1.22
CDH13-213ENST00000569454 EXOC6Q8TAG9 804 aa7.44□□□□□ -1.22
CDH13-213ENST00000569454 CDK19Q9BWU1 502 aa7.44□□□□□ -1.22
CDH13-213ENST00000569454 IL16Q14005 1332 aa7.44□□□□□ -1.22
CDH13-213ENST00000569454 MON2Q7Z3U7 1717 aa7.44□□□□□ -1.22
CDH13-213ENST00000569454 PTCH1Q13635 1447 aa7.44□□□□□ -1.22
CDH13-213ENST00000569454 STRCQ7RTU9 1775 aa7.43□□□□□ -1.22
CDH13-213ENST00000569454 CDK12Q9NYV4 1490 aaPredicted RBP7.43□□□□□ -1.22
CDH13-213ENST00000569454 WASLO00401 505 aaPredicted RBP7.43□□□□□ -1.22
CDH13-213ENST00000569454 SAFB2Q14151 953 aaKnown RBP eCLIP7.43□□□□□ -1.22
CDH13-213ENST00000569454 PDE3AQ14432 1141 aa7.43□□□□□ -1.22
CDH13-213ENST00000569454 CENPQQ7L2Z9 268 aaPredicted RBP7.43□□□□□ -1.22
CDH13-213ENST00000569454 HOMEZQ8IX15 550 aa7.43□□□□□ -1.22
CDH13-213ENST00000569454 CCDC146Q8IYE0 955 aa7.43□□□□□ -1.22
CDH13-213ENST00000569454 TCP11L2Q8N4U5 519 aa7.43□□□□□ -1.22
CDH13-213ENST00000569454 MAPK8IP3Q9UPT6 1336 aa7.43□□□□□ -1.22
CDH13-213ENST00000569454 AATKQ6ZMQ8 1374 aa7.43□□□□□ -1.22
CDH13-213ENST00000569454 PPIP5K1Q6PFW1 1433 aa7.43□□□□□ -1.22
CDH13-213ENST00000569454 ITSN1Q15811 1721 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms