RNA–Protein interactions for RNA: ENST00000569363.1

SPG7-220, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-220ENST00000569363 CABP2Q9NPB3 220 aa10.22□□□□□ -0.77
SPG7-220ENST00000569363 A0A1W2PP64 1363 aa10.22□□□□□ -0.77
SPG7-220ENST00000569363 COL3A1P02461 1466 aaPredicted RBP10.22□□□□□ -0.77
SPG7-220ENST00000569363 PTPRMP28827 1452 aa10.22□□□□□ -0.77
SPG7-220ENST00000569363 SRPK2P78362 688 aaKnown RBP10.21□□□□□ -0.77
SPG7-220ENST00000569363 IDI1Q13907 227 aa10.21□□□□□ -0.77
SPG7-220ENST00000569363 GSE1Q14687 1217 aa10.21□□□□□ -0.77
SPG7-220ENST00000569363 DZIP1LQ8IYY4 767 aaKnown RBP10.21□□□□□ -0.77
SPG7-220ENST00000569363 YTHDC2Q9H6S0 1430 aaKnown RBP10.21□□□□□ -0.78
SPG7-220ENST00000569363 ARHGEF40Q8TER5 1519 aa10.21□□□□□ -0.78
SPG7-220ENST00000569363 FTSJ3Q8IY81 847 aaKnown RBP10.2□□□□□ -0.78
SPG7-220ENST00000569363 DLC1Q96QB1 1528 aa10.2□□□□□ -0.78
SPG7-220ENST00000569363 POGKQ9P215 609 aa10.2□□□□□ -0.78
SPG7-220ENST00000569363 DDX19BQ9UMR2 479 aa10.2□□□□□ -0.78
SPG7-220ENST00000569363 CDC42BPGQ6DT37 1551 aa10.19□□□□□ -0.78
SPG7-220ENST00000569363 IPO8O15397 1037 aaKnown RBP10.19□□□□□ -0.78
SPG7-220ENST00000569363 RAPGEF3O95398 923 aa10.19□□□□□ -0.78
SPG7-220ENST00000569363 TMPOP42166 694 aaKnown RBP10.19□□□□□ -0.78
SPG7-220ENST00000569363 ZNF428Q96B54 188 aa10.19□□□□□ -0.78
SPG7-220ENST00000569363 PLEKHF1Q96S99 279 aa10.19□□□□□ -0.78
SPG7-220ENST00000569363 CHMP4BQ9H444 224 aaKnown RBP10.19□□□□□ -0.78
SPG7-220ENST00000569363 PDZRN3Q9UPQ7 1066 aa10.19□□□□□ -0.78
SPG7-220ENST00000569363 CFAP65Q6ZU64 1925 aaKnown RBP10.19□□□□□ -0.78
SPG7-220ENST00000569363 REREQ9P2R6 1566 aa10.18□□□□□ -0.78
SPG7-220ENST00000569363 PNPLA6Q8IY17 1366 aa10.18□□□□□ -0.78
SPG7-220ENST00000569363 USP19O94966 1318 aa10.18□□□□□ -0.78
SPG7-220ENST00000569363 KIF16BQ96L93 1317 aa10.18□□□□□ -0.78
SPG7-220ENST00000569363 U2SURPO15042 1029 aaKnown RBP10.18□□□□□ -0.78
SPG7-220ENST00000569363 DIAPH1O60610 1272 aaKnown RBP10.18□□□□□ -0.78
SPG7-220ENST00000569363 CALD1Q05682 793 aaKnown RBP10.18□□□□□ -0.78
SPG7-220ENST00000569363 HDAC1Q13547 482 aaPredicted RBP10.18□□□□□ -0.78
SPG7-220ENST00000569363 ALDH1L2Q3SY69 923 aa10.18□□□□□ -0.78
SPG7-220ENST00000569363 RNF39Q9H2S5 420 aa10.18□□□□□ -0.78
SPG7-220ENST00000569363 PCDHB15Q9Y5E8 787 aa10.18□□□□□ -0.78
SPG7-220ENST00000569363 ATP7BP35670 1465 aa10.17□□□□□ -0.78
SPG7-220ENST00000569363 RLBP1P12271 317 aa10.17□□□□□ -0.78
SPG7-220ENST00000569363 SLC4A3P48751 1232 aa10.17□□□□□ -0.78
SPG7-220ENST00000569363 SMC4Q9NTJ3 1288 aa10.17□□□□□ -0.78
SPG7-220ENST00000569363 STK26Q9P289 416 aa10.17□□□□□ -0.78
SPG7-220ENST00000569363 ALKQ9UM73 1620 aa10.17□□□□□ -0.78
SPG7-220ENST00000569363 NLRP1Q9C000 1473 aa10.17□□□□□ -0.78
SPG7-220ENST00000569363 KIF20BQ96Q89 1820 aa10.17□□□□□ -0.78
SPG7-220ENST00000569363 FYB1O15117 783 aa10.16□□□□□ -0.78
SPG7-220ENST00000569363 FCHSD2O94868 740 aa10.16□□□□□ -0.78
SPG7-220ENST00000569363 EXOSC9Q06265 439 aaKnown RBP10.16□□□□□ -0.78
SPG7-220ENST00000569363 ATF7IPQ6VMQ6 1270 aa10.16□□□□□ -0.78
SPG7-220ENST00000569363 TBC1D32Q96NH3 1257 aa10.16□□□□□ -0.78
SPG7-220ENST00000569363 PRAM1Q96QH2 718 aa10.16□□□□□ -0.78
SPG7-220ENST00000569363 TRIM35Q9UPQ4 493 aa10.16□□□□□ -0.78
SPG7-220ENST00000569363 AGLP35573 1532 aa10.16□□□□□ -0.78
SPG7-220ENST00000569363 CD163L1Q9NR16 1453 aa10.16□□□□□ -0.78
SPG7-220ENST00000569363 YEATS2Q9ULM3 1422 aa10.16□□□□□ -0.78
SPG7-220ENST00000569363 BRPF1P55201 1214 aaPredicted RBP10.15□□□□□ -0.78
SPG7-220ENST00000569363 NUTM2DQ5VT03 806 aaPredicted RBP10.15□□□□□ -0.78
SPG7-220ENST00000569363 GGNBP2Q9H3C7 697 aa10.15□□□□□ -0.78
SPG7-220ENST00000569363 ADAMTSL3P82987 1691 aa10.15□□□□□ -0.79
SPG7-220ENST00000569363 PPIP5K1Q6PFW1 1433 aa10.15□□□□□ -0.79
SPG7-220ENST00000569363 MINK1Q8N4C8 1332 aaPredicted RBP10.14□□□□□ -0.79
SPG7-220ENST00000569363 EIF5BO60841 1220 aaKnown RBP10.14□□□□□ -0.79
SPG7-220ENST00000569363 RIPK4P57078 832 aa10.14□□□□□ -0.79
SPG7-220ENST00000569363 SAFB2Q14151 953 aaKnown RBP eCLIP10.14□□□□□ -0.79
SPG7-220ENST00000569363 CDK19Q9BWU1 502 aa10.14□□□□□ -0.79
SPG7-220ENST00000569363 BCL2L13Q9BXK5 485 aa10.14□□□□□ -0.79
SPG7-220ENST00000569363 MYO5BQ9ULV0 1848 aa10.13□□□□□ -0.79
SPG7-220ENST00000569363 SMC5Q8IY18 1101 aa10.13□□□□□ -0.79
SPG7-220ENST00000569363 SSH1Q8WYL5 1049 aa10.13□□□□□ -0.79
SPG7-220ENST00000569363 TSR2Q969E8 191 aaKnown RBP10.13□□□□□ -0.79
SPG7-220ENST00000569363 STAG3Q9UJ98 1225 aa10.13□□□□□ -0.79
SPG7-220ENST00000569363 SEC24BO95487 1268 aa10.12□□□□□ -0.79
SPG7-220ENST00000569363 TRIM27P14373 513 aa10.12□□□□□ -0.79
SPG7-220ENST00000569363 LMOD3Q0VAK6 560 aa10.12□□□□□ -0.79
SPG7-220ENST00000569363 ITPRIPQ8IWB1 547 aa10.12□□□□□ -0.79
SPG7-220ENST00000569363 NOB1Q9ULX3 412 aaKnown RBP10.12□□□□□ -0.79
SPG7-220ENST00000569363 TNNQ9UQP3 1299 aa10.12□□□□□ -0.79
SPG7-220ENST00000569363 FAM135BQ49AJ0 1406 aa10.12□□□□□ -0.79
SPG7-220ENST00000569363 SPATA31D1Q6ZQQ2 1576 aa10.12□□□□□ -0.79
SPG7-220ENST00000569363 EDC4Q6P2E9 1401 aaKnown RBP10.11□□□□□ -0.79
SPG7-220ENST00000569363 KDM4FA0A1W2PPD8 638 aa10.11□□□□□ -0.79
SPG7-220ENST00000569363 FRAT2O75474 233 aaPredicted RBP10.11□□□□□ -0.79
SPG7-220ENST00000569363 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.11□□□□□ -0.79
SPG7-220ENST00000569363 ARHGAP45Q92619 1136 aa10.11□□□□□ -0.79
SPG7-220ENST00000569363 SIRT1Q96EB6 747 aa10.11□□□□□ -0.79
SPG7-220ENST00000569363 ZBTB40Q9NUA8 1239 aa10.11□□□□□ -0.79
SPG7-220ENST00000569363 CABP1Q9NZU7 370 aa10.11□□□□□ -0.79
SPG7-220ENST00000569363 RIMS2Q9UQ26 1411 aa10.1□□□□□ -0.79
SPG7-220ENST00000569363 NPM3O75607 178 aaKnown RBP10.1□□□□□ -0.79
SPG7-220ENST00000569363 GNAI1P63096 354 aa10.1□□□□□ -0.79
SPG7-220ENST00000569363 NFE2L2Q16236 605 aa10.1□□□□□ -0.79
SPG7-220ENST00000569363 RSPH6AQ9H0K4 717 aa10.1□□□□□ -0.79
SPG7-220ENST00000569363 LRRC7Q96NW7 1537 aa10.1□□□□□ -0.79
SPG7-220ENST00000569363 AATKQ6ZMQ8 1374 aa10.1□□□□□ -0.79
SPG7-220ENST00000569363 A2ML1A8K2U0 1454 aa10.1□□□□□ -0.79
SPG7-220ENST00000569363 CDK12Q9NYV4 1490 aaPredicted RBP10.1□□□□□ -0.79
SPG7-220ENST00000569363 HDGFP51858 240 aaKnown RBP10.09□□□□□ -0.79
SPG7-220ENST00000569363 NUCB1Q02818 461 aa10.09□□□□□ -0.79
SPG7-220ENST00000569363 C1QBPQ07021 282 aaKnown RBP10.09□□□□□ -0.79
SPG7-220ENST00000569363 L1TD1Q5T7N2 865 aaKnown RBP10.09□□□□□ -0.79
SPG7-220ENST00000569363 TMEM57Q8N5G2 664 aa10.09□□□□□ -0.79
SPG7-220ENST00000569363 CFAP44Q96MT7 982 aa10.09□□□□□ -0.79
SPG7-220ENST00000569363 C22orf23Q9BZE7 217 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms