RNA–Protein interactions for RNA: ENST00000569144.5

CDH13-212, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-212ENST00000569144 RBM6P78332 1123 aaKnown RBP9.37□□□□□ -0.91
CDH13-212ENST00000569144 NOS1P29475 1434 aa9.37□□□□□ -0.91
CDH13-212ENST00000569144 CHD2O14647 1828 aaKnown RBP9.36□□□□□ -0.91
CDH13-212ENST00000569144 NUTM2BA6NNL0 878 aaPredicted RBP9.36□□□□□ -0.91
CDH13-212ENST00000569144 NUTM2EB1AL46 878 aaPredicted RBP9.36□□□□□ -0.91
CDH13-212ENST00000569144 SNPHO15079 494 aa9.36□□□□□ -0.91
CDH13-212ENST00000569144 NUTM2AQ8IVF1 878 aaPredicted RBP9.36□□□□□ -0.91
CDH13-212ENST00000569144 C19orf44Q9H6X5 657 aa9.36□□□□□ -0.91
CDH13-212ENST00000569144 SLC52A1Q9NWF4 448 aa9.36□□□□□ -0.91
CDH13-212ENST00000569144 MYOM3Q5VTT5 1437 aa9.36□□□□□ -0.91
CDH13-212ENST00000569144 ZFYVE9O95405 1425 aa9.35□□□□□ -0.91
CDH13-212ENST00000569144 ATF3P18847 181 aa9.35□□□□□ -0.91
CDH13-212ENST00000569144 NUTM2DQ5VT03 806 aaPredicted RBP9.35□□□□□ -0.91
CDH13-212ENST00000569144 BRINP3Q76B58 766 aa9.35□□□□□ -0.91
CDH13-212ENST00000569144 C14orf37Q86TY3 774 aa9.35□□□□□ -0.91
CDH13-212ENST00000569144 SETD5Q9C0A6 1442 aa9.35□□□□□ -0.91
CDH13-212ENST00000569144 QTRT2Q9H974 415 aaKnown RBP9.35□□□□□ -0.91
CDH13-212ENST00000569144 WDR70Q9NW82 654 aa9.35□□□□□ -0.91
CDH13-212ENST00000569144 TBX22Q9Y458 520 aa9.35□□□□□ -0.91
CDH13-212ENST00000569144 ATAD2Q6PL18 1390 aa9.35□□□□□ -0.91
CDH13-212ENST00000569144 HOXB3P14651 431 aaPredicted RBP9.34□□□□□ -0.91
CDH13-212ENST00000569144 HDGFP51858 240 aaKnown RBP9.34□□□□□ -0.91
CDH13-212ENST00000569144 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.34□□□□□ -0.92
CDH13-212ENST00000569144 PPP1R15AO75807 674 aaPredicted RBP9.33□□□□□ -0.92
CDH13-212ENST00000569144 DOK7Q18PE1 504 aa9.33□□□□□ -0.92
CDH13-212ENST00000569144 DCCP43146 1447 aa9.32□□□□□ -0.92
CDH13-212ENST00000569144 RIMS2Q9UQ26 1411 aa9.32□□□□□ -0.92
CDH13-212ENST00000569144 ASXL1Q8IXJ9 1541 aa9.32□□□□□ -0.92
CDH13-212ENST00000569144 NGLY1Q96IV0 654 aa9.32□□□□□ -0.92
CDH13-212ENST00000569144 C8orf37Q96NL8 207 aa9.32□□□□□ -0.92
CDH13-212ENST00000569144 RRP7BPQ9NSQ0 103 aa9.32□□□□□ -0.92
CDH13-212ENST00000569144 PIK3R4Q99570 1358 aa9.32□□□□□ -0.92
CDH13-212ENST00000569144 SETBP1Q9Y6X0 1596 aa9.32□□□□□ -0.92
CDH13-212ENST00000569144 LRRC59Q96AG4 307 aaKnown RBP9.31□□□□□ -0.92
CDH13-212ENST00000569144 ABCC5O15440 1437 aa9.31□□□□□ -0.92
CDH13-212ENST00000569144 ADAMTS13Q76LX8 1427 aa9.31□□□□□ -0.92
CDH13-212ENST00000569144 RPRD2Q5VT52 1461 aaKnown RBP9.3□□□□□ -0.92
CDH13-212ENST00000569144 VSIG10Q8N0Z9 540 aa9.3□□□□□ -0.92
CDH13-212ENST00000569144 ZNF710Q8N1W2 664 aa9.3□□□□□ -0.92
CDH13-212ENST00000569144 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.3□□□□□ -0.92
CDH13-212ENST00000569144 FAM163AQ96GL9 167 aaPredicted RBP9.3□□□□□ -0.92
CDH13-212ENST00000569144 KDM2AQ9Y2K7 1162 aa9.3□□□□□ -0.92
CDH13-212ENST00000569144 NHSL1Q5SYE7 1610 aa9.3□□□□□ -0.92
CDH13-212ENST00000569144 CROCC2H7BZ55 1655 aa9.29□□□□□ -0.92
CDH13-212ENST00000569144 PNPLA6Q8IY17 1366 aa9.29□□□□□ -0.92
CDH13-212ENST00000569144 RIMBP2O15034 1052 aa9.29□□□□□ -0.92
CDH13-212ENST00000569144 MST1RQ04912 1400 aa9.29□□□□□ -0.92
CDH13-212ENST00000569144 TMEM131LA2VDJ0 1609 aa9.28□□□□□ -0.92
CDH13-212ENST00000569144 CCDC125Q86Z20 511 aa9.28□□□□□ -0.92
CDH13-212ENST00000569144 TRPM2O94759 1503 aa9.27□□□□□ -0.93
CDH13-212ENST00000569144 GCC2Q8IWJ2 1684 aa9.27□□□□□ -0.93
CDH13-212ENST00000569144 SLC34A2O95436 690 aa9.27□□□□□ -0.93
CDH13-212ENST00000569144 TRPC5Q9UL62 973 aaPredicted RBP9.27□□□□□ -0.93
CDH13-212ENST00000569144 AMOTL2Q9Y2J4 779 aa9.27□□□□□ -0.93
CDH13-212ENST00000569144 DAPK1P53355 1430 aa9.27□□□□□ -0.93
CDH13-212ENST00000569144 ANKRD30AQ9BXX3 1397 aa9.26□□□□□ -0.93
CDH13-212ENST00000569144 PTPRUQ92729 1446 aa9.26□□□□□ -0.93
CDH13-212ENST00000569144 ST18O60284 1047 aa9.26□□□□□ -0.93
CDH13-212ENST00000569144 CAMK2BQ13554 666 aa9.26□□□□□ -0.93
CDH13-212ENST00000569144 E2F4Q16254 413 aa9.26□□□□□ -0.93
CDH13-212ENST00000569144 USP21Q9UK80 565 aa9.26□□□□□ -0.93
CDH13-212ENST00000569144 ATRNO75882 1429 aa9.25□□□□□ -0.93
CDH13-212ENST00000569144 SLC24A1O60721 1099 aa9.25□□□□□ -0.93
CDH13-212ENST00000569144 ADAMTS2O95450 1211 aa9.25□□□□□ -0.93
CDH13-212ENST00000569144 KANK4Q5T7N3 995 aaPredicted RBP9.25□□□□□ -0.93
CDH13-212ENST00000569144 PTCD2Q8WV60 388 aaKnown RBP9.25□□□□□ -0.93
CDH13-212ENST00000569144 ZSWIM6Q9HCJ5 1215 aa9.25□□□□□ -0.93
CDH13-212ENST00000569144 MYO5BQ9ULV0 1848 aa9.24□□□□□ -0.93
CDH13-212ENST00000569144 ARSIQ5FYB1 569 aa9.24□□□□□ -0.93
CDH13-212ENST00000569144 FNBP4Q8N3X1 1017 aaPredicted RBP9.24□□□□□ -0.93
CDH13-212ENST00000569144 DDX17Q92841 729 aaKnown RBP9.24□□□□□ -0.93
CDH13-212ENST00000569144 EMILIN3Q9NT22 766 aa9.24□□□□□ -0.93
CDH13-212ENST00000569144 PCDHGA4Q9Y5G9 962 aa9.24□□□□□ -0.93
CDH13-212ENST00000569144 PTPN23Q9H3S7 1636 aa9.23□□□□□ -0.93
CDH13-212ENST00000569144 PTCH1Q13635 1447 aa9.23□□□□□ -0.93
CDH13-212ENST00000569144 VPS8Q8N3P4 1428 aa9.23□□□□□ -0.93
CDH13-212ENST00000569144 GPR153Q6NV75 609 aa9.23□□□□□ -0.93
CDH13-212ENST00000569144 OXER1Q8TDS5 423 aa9.23□□□□□ -0.93
CDH13-212ENST00000569144 KHSRPQ92945 711 aaKnown RBP eCLIP9.23□□□□□ -0.93
CDH13-212ENST00000569144 ADGRL3Q9HAR2 1447 aa9.22□□□□□ -0.93
CDH13-212ENST00000569144 XRN1Q8IZH2 1706 aaKnown RBP9.22□□□□□ -0.93
CDH13-212ENST00000569144 UNC13BO14795 1591 aa9.22□□□□□ -0.93
CDH13-212ENST00000569144 TBC1D12O60347 775 aa9.22□□□□□ -0.93
CDH13-212ENST00000569144 LCE2DQ5TA82 110 aaPredicted RBP9.22□□□□□ -0.93
CDH13-212ENST00000569144 CHIC2Q9UKJ5 165 aa9.22□□□□□ -0.93
CDH13-212ENST00000569144 LRP5O75197 1615 aa9.22□□□□□ -0.93
CDH13-212ENST00000569144 EP400Q96L91 3159 aa9.21□□□□□ -0.93
CDH13-212ENST00000569144 LAMC1P11047 1609 aa9.21□□□□□ -0.93
CDH13-212ENST00000569144 HOXB1P14653 301 aaPredicted RBP9.21□□□□□ -0.94
CDH13-212ENST00000569144 MAP3K9P80192 1104 aa9.21□□□□□ -0.94
CDH13-212ENST00000569144 SOS2Q07890 1332 aaPredicted RBP9.21□□□□□ -0.94
CDH13-212ENST00000569144 BLMP54132 1417 aaPredicted RBP9.21□□□□□ -0.94
CDH13-212ENST00000569144 ADGRL2O95490 1459 aa9.21□□□□□ -0.94
CDH13-212ENST00000569144 KCNV2Q8TDN2 545 aa9.2□□□□□ -0.94
CDH13-212ENST00000569144 C1orf167Q5SNV9 1468 aa9.2□□□□□ -0.94
CDH13-212ENST00000569144 DPYSL4O14531 572 aa9.19□□□□□ -0.94
CDH13-212ENST00000569144 NUDT7P0C024 238 aa9.19□□□□□ -0.94
CDH13-212ENST00000569144 MARVELD3Q96A59 401 aa9.19□□□□□ -0.94
CDH13-212ENST00000569144 ANKRD50Q9ULJ7 1429 aa9.19□□□□□ -0.94
CDH13-212ENST00000569144 BCL9LQ86UU0 1499 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms