RNA–Protein interactions for RNA: ENST00000568977.1

CPNE7-209, Transcript of copine 7, humanhuman

TSL 5

Gene CPNE7, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-209ENST00000568977 COL14A1Q05707 1796 aaKnown RBP26.79■■□□□ 1.88
CPNE7-209ENST00000568977 PAK3O75914 559 aaPredicted RBP26.79■■□□□ 1.88
CPNE7-209ENST00000568977 POLR3AO14802 1390 aaPredicted RBP26.79■■□□□ 1.88
CPNE7-209ENST00000568977 NEUROD1Q13562 356 aa26.78■■□□□ 1.88
CPNE7-209ENST00000568977 PHRF1Q9P1Y6 1649 aaKnown RBP26.78■■□□□ 1.88
CPNE7-209ENST00000568977 CCDC61Q9Y6R9 512 aa26.77■■□□□ 1.88
CPNE7-209ENST00000568977 VPS72Q15906 364 aa26.76■■□□□ 1.87
CPNE7-209ENST00000568977 BRWD3Q6RI45 1802 aa26.75■■□□□ 1.87
CPNE7-209ENST00000568977 FAM83GA6ND36 823 aa26.75■■□□□ 1.87
CPNE7-209ENST00000568977 ACEP12821 1306 aa26.74■■□□□ 1.87
CPNE7-209ENST00000568977 SRPK2P78362 688 aaKnown RBP26.73■■□□□ 1.87
CPNE7-209ENST00000568977 PLEKHG3A1L390 1219 aa26.72■■□□□ 1.87
CPNE7-209ENST00000568977 PPIP5K1Q6PFW1 1433 aa26.72■■□□□ 1.87
CPNE7-209ENST00000568977 ROCK2O75116 1388 aaKnown RBP26.71■■□□□ 1.87
CPNE7-209ENST00000568977 CCDC9Q9Y3X0 531 aaKnown RBP26.71■■□□□ 1.87
CPNE7-209ENST00000568977 EP400Q96L91 3159 aa26.7■■□□□ 1.87
CPNE7-209ENST00000568977 NBPF8Q3BBV2 869 aa26.7■■□□□ 1.86
CPNE7-209ENST00000568977 CABP2Q9NPB3 220 aa26.69■■□□□ 1.86
CPNE7-209ENST00000568977 BTG4Q9NY30 223 aa26.69■■□□□ 1.86
CPNE7-209ENST00000568977 NRKQ7Z2Y5 1582 aa26.68■■□□□ 1.86
CPNE7-209ENST00000568977 PRDM11Q9NQV5 511 aa26.67■■□□□ 1.86
CPNE7-209ENST00000568977 SEPT12Q8IYM1 358 aa26.66■■□□□ 1.86
CPNE7-209ENST00000568977 NUTM2GQ5VZR2 741 aa26.65■■□□□ 1.86
CPNE7-209ENST00000568977 KIAA0232Q92628 1395 aa26.65■■□□□ 1.86
CPNE7-209ENST00000568977 ONECUT3O60422 494 aaPredicted RBP26.62■■□□□ 1.85
CPNE7-209ENST00000568977 EVC2Q86UK5 1308 aa26.62■■□□□ 1.85
CPNE7-209ENST00000568977 USP6P35125 1406 aa26.6■■□□□ 1.85
CPNE7-209ENST00000568977 ABTB2Q8N961 1025 aa26.6■■□□□ 1.85
CPNE7-209ENST00000568977 USP19O94966 1318 aa26.6■■□□□ 1.85
CPNE7-209ENST00000568977 BRD4O60885 1362 aaPredicted RBP26.59■■□□□ 1.85
CPNE7-209ENST00000568977 A0A0G2JS52 829 aa26.59■■□□□ 1.85
CPNE7-209ENST00000568977 MYT1Q01538 1121 aa26.59■■□□□ 1.85
CPNE7-209ENST00000568977 TONSLQ96HA7 1378 aa26.58■■□□□ 1.85
CPNE7-209ENST00000568977 BLMP54132 1417 aaPredicted RBP26.58■■□□□ 1.85
CPNE7-209ENST00000568977 THSD7AQ9UPZ6 1657 aa26.58■■□□□ 1.85
CPNE7-209ENST00000568977 CHRNA2Q15822 529 aa26.58■■□□□ 1.85
CPNE7-209ENST00000568977 FAM98CQ17RN3 349 aaKnown RBP26.58■■□□□ 1.85
CPNE7-209ENST00000568977 CCDC125Q86Z20 511 aa26.58■■□□□ 1.85
CPNE7-209ENST00000568977 CABP1Q9NZU7 370 aa26.58■■□□□ 1.85
CPNE7-209ENST00000568977 SPATA31A5Q5VU36 1347 aa26.58■■□□□ 1.85
CPNE7-209ENST00000568977 SPATA31A7Q8IWB4 1347 aa26.58■■□□□ 1.85
CPNE7-209ENST00000568977 ZC3H6P61129 1189 aaKnown RBP26.57■■□□□ 1.84
CPNE7-209ENST00000568977 TRIM26Q12899 539 aaPredicted RBP26.56■■□□□ 1.84
CPNE7-209ENST00000568977 KRT27Q7Z3Y8 459 aa26.56■■□□□ 1.84
CPNE7-209ENST00000568977 LMO7Q8WWI1 1683 aa26.56■■□□□ 1.84
CPNE7-209ENST00000568977 AKAP12Q02952 1782 aa26.55■■□□□ 1.84
CPNE7-209ENST00000568977 CPDO75976 1380 aa26.55■■□□□ 1.84
CPNE7-209ENST00000568977 PIK3C2AO00443 1686 aa26.54■■□□□ 1.84
CPNE7-209ENST00000568977 NLRP13Q86W25 1043 aa26.54■■□□□ 1.84
CPNE7-209ENST00000568977 SBNO2Q9Y2G9 1366 aa26.53■■□□□ 1.84
CPNE7-209ENST00000568977 SLIT3O75094 1523 aa26.52■■□□□ 1.84
CPNE7-209ENST00000568977 SSH2Q76I76 1423 aa26.52■■□□□ 1.84
CPNE7-209ENST00000568977 STRN4Q9NRL3 753 aa26.52■■□□□ 1.84
CPNE7-209ENST00000568977 CAMTA1Q9Y6Y1 1673 aa26.51■■□□□ 1.83
CPNE7-209ENST00000568977 SPATA31A1Q5TZJ5 1347 aa26.5■■□□□ 1.83
CPNE7-209ENST00000568977 CARD11Q9BXL7 1154 aa26.5■■□□□ 1.83
CPNE7-209ENST00000568977 GCP02774 474 aa26.48■■□□□ 1.83
CPNE7-209ENST00000568977 MON2Q7Z3U7 1717 aa26.47■■□□□ 1.83
CPNE7-209ENST00000568977 NLRP6P59044 892 aa26.46■■□□□ 1.83
CPNE7-209ENST00000568977 SF3B2Q13435 895 aaKnown RBP26.45■■□□□ 1.82
CPNE7-209ENST00000568977 DEFB132Q7Z7B7 95 aa26.44■■□□□ 1.82
CPNE7-209ENST00000568977 CPSF1Q10570 1443 aaKnown RBP26.44■■□□□ 1.82
CPNE7-209ENST00000568977 RGPD1P0DJD0 1748 aa26.44■■□□□ 1.82
CPNE7-209ENST00000568977 COL5A2P05997 1499 aaPredicted RBP26.43■■□□□ 1.82
CPNE7-209ENST00000568977 EVA1CP58658 441 aa26.43■■□□□ 1.82
CPNE7-209ENST00000568977 ZNF692Q9BU19 519 aaPredicted RBP26.42■■□□□ 1.82
CPNE7-209ENST00000568977 ZRANB1Q9UGI0 708 aa26.42■■□□□ 1.82
CPNE7-209ENST00000568977 TTC21BQ7Z4L5 1316 aa26.41■■□□□ 1.82
CPNE7-209ENST00000568977 USP35Q9P2H5 1018 aa26.41■■□□□ 1.82
CPNE7-209ENST00000568977 LARP1Q6PKG0 1096 aaKnown RBP26.4■■□□□ 1.82
CPNE7-209ENST00000568977 TTC21AQ8NDW8 1320 aa26.39■■□□□ 1.82
CPNE7-209ENST00000568977 COL18A1P39060 1754 aa26.39■■□□□ 1.82
CPNE7-209ENST00000568977 KTN1Q86UP2 1357 aaKnown RBP26.39■■□□□ 1.82
CPNE7-209ENST00000568977 FAM182BQ5T319 152 aa26.39■■□□□ 1.82
CPNE7-209ENST00000568977 TNS1Q9HBL0 1735 aaKnown RBP26.39■■□□□ 1.81
CPNE7-209ENST00000568977 AATKQ6ZMQ8 1374 aa26.38■■□□□ 1.81
CPNE7-209ENST00000568977 ZBTB7CA1YPR0 619 aa26.38■■□□□ 1.81
CPNE7-209ENST00000568977 BARGINQ6ZT62 677 aa26.38■■□□□ 1.81
CPNE7-209ENST00000568977 CD163L1Q9NR16 1453 aa26.36■■□□□ 1.81
CPNE7-209ENST00000568977 USP54Q70EL1 1684 aa26.35■■□□□ 1.81
CPNE7-209ENST00000568977 CRB1P82279 1406 aa26.35■■□□□ 1.81
CPNE7-209ENST00000568977 TCP11L2Q8N4U5 519 aa26.35■■□□□ 1.81
CPNE7-209ENST00000568977 PARP4Q9UKK3 1724 aaKnown RBP26.35■■□□□ 1.81
CPNE7-209ENST00000568977 NFAT5O94916 1531 aa26.34■■□□□ 1.81
CPNE7-209ENST00000568977 BAG6P46379 1132 aa26.34■■□□□ 1.81
CPNE7-209ENST00000568977 KCNH5Q8NCM2 988 aa26.32■■□□□ 1.8
CPNE7-209ENST00000568977 THRAP3Q9Y2W1 955 aaKnown RBP26.32■■□□□ 1.8
CPNE7-209ENST00000568977 RGPD5Q99666 1765 aa26.32■■□□□ 1.8
CPNE7-209ENST00000568977 WNK3Q9BYP7 1800 aa26.32■■□□□ 1.8
CPNE7-209ENST00000568977 SOX12O15370 315 aa26.3■■□□□ 1.8
CPNE7-209ENST00000568977 TMC1Q8TDI8 760 aa26.3■■□□□ 1.8
CPNE7-209ENST00000568977 DISP2A7MBM2 1401 aa26.3■■□□□ 1.8
CPNE7-209ENST00000568977 LRRC37A3O60309 1634 aa26.29■■□□□ 1.8
CPNE7-209ENST00000568977 ARHGEF25Q86VW2 580 aa26.29■■□□□ 1.8
CPNE7-209ENST00000568977 FAM196AQ6ZSG2 479 aa26.28■■□□□ 1.8
CPNE7-209ENST00000568977 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.28■■□□□ 1.8
CPNE7-209ENST00000568977 USP31Q70CQ4 1352 aa26.28■■□□□ 1.8
CPNE7-209ENST00000568977 ABCC6O95255 1503 aa26.28■■□□□ 1.8
CPNE7-209ENST00000568977 PDE3BQ13370 1112 aa26.27■■□□□ 1.8
CPNE7-209ENST00000568977 TESK2Q96S53 571 aa26.27■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms