RNA–Protein interactions for RNA: ENST00000568875.1

SNAPC5-208, Transcript of small nuclear RNA activating complex polypeptide 5, humanhuman

TSL 2

Gene SNAPC5, Length 1,741 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC5-208ENST00000568875 TRPM3Q9HCF6 1732 aaPredicted RBP16.15■□□□□ 0.18
SNAPC5-208ENST00000568875 EVC2Q86UK5 1308 aa16.15■□□□□ 0.18
SNAPC5-208ENST00000568875 TOPAZ1Q8N9V7 1692 aa16.13■□□□□ 0.17
SNAPC5-208ENST00000568875 PAK3O75914 559 aaPredicted RBP16.13■□□□□ 0.17
SNAPC5-208ENST00000568875 RBM6P78332 1123 aaKnown RBP16.12■□□□□ 0.17
SNAPC5-208ENST00000568875 CABP1Q9NZU7 370 aa16.12■□□□□ 0.17
SNAPC5-208ENST00000568875 ALS2Q96Q42 1657 aa16.12■□□□□ 0.17
SNAPC5-208ENST00000568875 PPIP5K1Q6PFW1 1433 aa16.12■□□□□ 0.17
SNAPC5-208ENST00000568875 MARF1Q9Y4F3 1742 aaKnown RBP16.12■□□□□ 0.17
SNAPC5-208ENST00000568875 BCL9LQ86UU0 1499 aa16.11■□□□□ 0.17
SNAPC5-208ENST00000568875 PLEKHG5O94827 1062 aa16.11■□□□□ 0.17
SNAPC5-208ENST00000568875 SBNO2Q9Y2G9 1366 aa16.11■□□□□ 0.17
SNAPC5-208ENST00000568875 HAP1P54257 671 aaPredicted RBP16.11■□□□□ 0.17
SNAPC5-208ENST00000568875 TRPC5Q9UL62 973 aaPredicted RBP16.11■□□□□ 0.17
SNAPC5-208ENST00000568875 SLIT2O94813 1529 aa16.09■□□□□ 0.17
SNAPC5-208ENST00000568875 FAM83GA6ND36 823 aa16.08■□□□□ 0.17
SNAPC5-208ENST00000568875 CDK12Q9NYV4 1490 aaPredicted RBP16.08■□□□□ 0.16
SNAPC5-208ENST00000568875 ATRNO75882 1429 aa16.08■□□□□ 0.16
SNAPC5-208ENST00000568875 UNC5CLQ8IV45 518 aa16.08■□□□□ 0.16
SNAPC5-208ENST00000568875 BRD4O60885 1362 aaPredicted RBP16.06■□□□□ 0.16
SNAPC5-208ENST00000568875 ABCA3Q99758 1704 aa16.06■□□□□ 0.16
SNAPC5-208ENST00000568875 ST20-MTHFSA0A0A6YYL1 179 aa16.05■□□□□ 0.16
SNAPC5-208ENST00000568875 NUTM2GQ5VZR2 741 aa16.05■□□□□ 0.16
SNAPC5-208ENST00000568875 ABTB2Q8N961 1025 aa16.05■□□□□ 0.16
SNAPC5-208ENST00000568875 TESK2Q96S53 571 aa16.05■□□□□ 0.16
SNAPC5-208ENST00000568875 GJD4Q96KN9 370 aaPredicted RBP16.05■□□□□ 0.16
SNAPC5-208ENST00000568875 ZNF692Q9BU19 519 aaPredicted RBP16.05■□□□□ 0.16
SNAPC5-208ENST00000568875 ATAD2Q6PL18 1390 aa16.04■□□□□ 0.16
SNAPC5-208ENST00000568875 PUS7Q96PZ0 661 aaKnown RBP16.04■□□□□ 0.16
SNAPC5-208ENST00000568875 USP6P35125 1406 aa16.04■□□□□ 0.16
SNAPC5-208ENST00000568875 SSH2Q76I76 1423 aa16.03■□□□□ 0.16
SNAPC5-208ENST00000568875 CRYBG1Q9Y4K1 1723 aa16.03■□□□□ 0.16
SNAPC5-208ENST00000568875 RGS12O14924 1447 aa16.02■□□□□ 0.15
SNAPC5-208ENST00000568875 SLC24A1O60721 1099 aa16.02■□□□□ 0.15
SNAPC5-208ENST00000568875 NLRP13Q86W25 1043 aa16.02■□□□□ 0.15
SNAPC5-208ENST00000568875 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.01■□□□□ 0.15
SNAPC5-208ENST00000568875 CPSF1Q10570 1443 aaKnown RBP16.01■□□□□ 0.15
SNAPC5-208ENST00000568875 VPS72Q15906 364 aa16.01■□□□□ 0.15
SNAPC5-208ENST00000568875 BTG4Q9NY30 223 aa16.01■□□□□ 0.15
SNAPC5-208ENST00000568875 USP19O94966 1318 aa16■□□□□ 0.15
SNAPC5-208ENST00000568875 NWD2Q9ULI1 1742 aa16■□□□□ 0.15
SNAPC5-208ENST00000568875 ZC3H6P61129 1189 aaKnown RBP15.99■□□□□ 0.15
SNAPC5-208ENST00000568875 SLC12A5Q9H2X9 1139 aa15.99■□□□□ 0.15
SNAPC5-208ENST00000568875 PRDM11Q9NQV5 511 aa15.99■□□□□ 0.15
SNAPC5-208ENST00000568875 KIAA0232Q92628 1395 aa15.99■□□□□ 0.15
SNAPC5-208ENST00000568875 TTC21BQ7Z4L5 1316 aa15.99■□□□□ 0.15
SNAPC5-208ENST00000568875 GCP02774 474 aa15.99■□□□□ 0.15
SNAPC5-208ENST00000568875 NLRP6P59044 892 aa15.99■□□□□ 0.15
SNAPC5-208ENST00000568875 PLCH1Q4KWH8 1693 aa15.98■□□□□ 0.15
SNAPC5-208ENST00000568875 USP47Q96K76 1375 aa15.98■□□□□ 0.15
SNAPC5-208ENST00000568875 EP400Q96L91 3159 aa15.97■□□□□ 0.15
SNAPC5-208ENST00000568875 CCER2I3L3R5 266 aa15.97■□□□□ 0.15
SNAPC5-208ENST00000568875 ONECUT3O60422 494 aaPredicted RBP15.97■□□□□ 0.15
SNAPC5-208ENST00000568875 CHRNA2Q15822 529 aa15.97■□□□□ 0.15
SNAPC5-208ENST00000568875 TMC1Q8TDI8 760 aa15.97■□□□□ 0.15
SNAPC5-208ENST00000568875 UPF1Q92900 1129 aaKnown RBP eCLIP15.97■□□□□ 0.15
SNAPC5-208ENST00000568875 COL14A1Q05707 1796 aaKnown RBP15.97■□□□□ 0.15
SNAPC5-208ENST00000568875 KTN1Q86UP2 1357 aaKnown RBP15.97■□□□□ 0.15
SNAPC5-208ENST00000568875 PHRF1Q9P1Y6 1649 aaKnown RBP15.97■□□□□ 0.15
SNAPC5-208ENST00000568875 GLI3P10071 1580 aa15.96■□□□□ 0.15
SNAPC5-208ENST00000568875 TTC21AQ8NDW8 1320 aa15.96■□□□□ 0.15
SNAPC5-208ENST00000568875 CD163L1Q9NR16 1453 aa15.96■□□□□ 0.15
SNAPC5-208ENST00000568875 AKAP12Q02952 1782 aa15.96■□□□□ 0.15
SNAPC5-208ENST00000568875 CPDO75976 1380 aa15.96■□□□□ 0.14
SNAPC5-208ENST00000568875 DDX10Q13206 875 aaKnown RBP15.95■□□□□ 0.14
SNAPC5-208ENST00000568875 CCDC9Q9Y3X0 531 aaKnown RBP15.94■□□□□ 0.14
SNAPC5-208ENST00000568875 NRAPQ86VF7 1730 aa15.94■□□□□ 0.14
SNAPC5-208ENST00000568875 TMF1P82094 1093 aa15.94■□□□□ 0.14
SNAPC5-208ENST00000568875 TERF2IPQ9NYB0 399 aa15.94■□□□□ 0.14
SNAPC5-208ENST00000568875 HDGFL2Q7Z4V5 671 aaPredicted RBP15.93■□□□□ 0.14
SNAPC5-208ENST00000568875 NRKQ7Z2Y5 1582 aa15.93■□□□□ 0.14
SNAPC5-208ENST00000568875 PIK3C2AO00443 1686 aa15.93■□□□□ 0.14
SNAPC5-208ENST00000568875 SPATA31A5Q5VU36 1347 aa15.92■□□□□ 0.14
SNAPC5-208ENST00000568875 SPATA31A7Q8IWB4 1347 aa15.92■□□□□ 0.14
SNAPC5-208ENST00000568875 SEPT12Q8IYM1 358 aa15.92■□□□□ 0.14
SNAPC5-208ENST00000568875 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.91■□□□□ 0.14
SNAPC5-208ENST00000568875 SLIT3O75094 1523 aa15.91■□□□□ 0.14
SNAPC5-208ENST00000568875 MON2Q7Z3U7 1717 aa15.91■□□□□ 0.14
SNAPC5-208ENST00000568875 NINLQ9Y2I6 1382 aa15.91■□□□□ 0.14
SNAPC5-208ENST00000568875 A0A1W2PP64 1363 aa15.9■□□□□ 0.14
SNAPC5-208ENST00000568875 CAMTA1Q9Y6Y1 1673 aa15.9■□□□□ 0.14
SNAPC5-208ENST00000568875 KCNH5Q8NCM2 988 aa15.9■□□□□ 0.14
SNAPC5-208ENST00000568875 STRN4Q9NRL3 753 aa15.9■□□□□ 0.14
SNAPC5-208ENST00000568875 ZRANB1Q9UGI0 708 aa15.9■□□□□ 0.14
SNAPC5-208ENST00000568875 USP31Q70CQ4 1352 aa15.89■□□□□ 0.13
SNAPC5-208ENST00000568875 ANP32CO43423 234 aa15.89■□□□□ 0.13
SNAPC5-208ENST00000568875 EVA1CP58658 441 aa15.89■□□□□ 0.13
SNAPC5-208ENST00000568875 FAM98CQ17RN3 349 aaKnown RBP15.89■□□□□ 0.13
SNAPC5-208ENST00000568875 ARHGEF25Q86VW2 580 aa15.89■□□□□ 0.13
SNAPC5-208ENST00000568875 SPATA31A1Q5TZJ5 1347 aa15.89■□□□□ 0.13
SNAPC5-208ENST00000568875 EDC4Q6P2E9 1401 aaKnown RBP15.89■□□□□ 0.13
SNAPC5-208ENST00000568875 CDCA8Q53HL2 280 aa15.88■□□□□ 0.13
SNAPC5-208ENST00000568875 NME9Q86XW9 330 aa15.88■□□□□ 0.13
SNAPC5-208ENST00000568875 AATKQ6ZMQ8 1374 aa15.88■□□□□ 0.13
SNAPC5-208ENST00000568875 LMO7Q8WWI1 1683 aa15.88■□□□□ 0.13
SNAPC5-208ENST00000568875 LARP1Q6PKG0 1096 aaKnown RBP15.87■□□□□ 0.13
SNAPC5-208ENST00000568875 AXIN2Q9Y2T1 843 aa15.86■□□□□ 0.13
SNAPC5-208ENST00000568875 BRWD3Q6RI45 1802 aa15.86■□□□□ 0.13
SNAPC5-208ENST00000568875 ZBTB7CA1YPR0 619 aa15.85■□□□□ 0.13
SNAPC5-208ENST00000568875 SOX12O15370 315 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms